You are here

Home

CAN33_3570-T1, CAN33_3570-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3570-T1
Unique NameCAN33_3570-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2285643..2287494+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3570-T1 ID=CAN33_3570-T1|Name=CAN33_3570-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1852bp|location=Sequence derived from alignment at NKJJ01000004.1:2285643..2287494+ (Aspergillus niger FDAARGOS_311)
ATGCCCTCCGGAGGAATGGGGCCCGGTTCGTCGAATACTTCGTCCCTGGG
CGCCCAGCCTTCAGGATCAATGAGCCGTCGTGCTGCCAGTCCCAGCTCCG
AGTCAGACAGCGGCTCGGCACCATACTCTTCCAATGCCGATGACAAAACC
CTGCATGAGACGTATCTTTGGCCTTTCTATGACGCAGTCAAACATGGCCT
GGGTGCTGTGATGTGTGCCATGACCAAGGTCAATGGCACGCTAAGCTGTC
AGAACTCCGATTTGTTGATGAAGCATTTGAAGACCGAGCTTGGCTTCCCA
GGATTGGTATGGCCTGACACTAATGGCCAGAGCAGTGCGTTAGAGTCTGC
TGTTAATGGCGAGGATTACGGTTCCAGTAGTATTTGGAGCACTTCCACCA
TGGAGACCCTGTTGTCCAATGGCTCTCTAAGCGAGGCTCGCTTGGATGAT
ATGGCTGTTCGCAATCTGATGGGTTATTACTATGTTAACCTGGACAATGG
CCTCCAACCCGAGGAACAAAGTGAAGATGCGTACGTGGATGTGAGAGGCA
ACCACTCCAAGCTGATCCGGGAAAATGGAGCCAAGTCGATGGCCCTGCTG
AAGAACAAGAACGCCCTGCCTCTTAGGAAGCCTCGTGTCATGAGTGTTTT
CGGTGCCCATGCTGGTCCTGTGCTAGGGGACCTAACACGGCCATGGACAT
CGAGGGTTCGGGACCGACGTACCAGGGCCACTTGGCCACAGGCACCGGTT
CTGCTCAGGCATCTTTGCCTTACCTAGTGCCACCTTATGTCGCACTGACT
AACAGGATCATTGAAGATGGCACCATGATGCGGTGGGTGCTCAATGATAC
CTATTCCTCTTCTAGCACTTCCGGCTTGATCATGGAGGGAACTGACAGCA
CCGCCGTGGACCCCTCGTTTGCCAATTATGCCACCAACTCTGATGCTTGT
CTCGTCTTTTTGAATGCTCTGTCCGGAGAAGGCGCTGATCGCACCGAGCT
GTACAATGATGACCAAGATACCATGGTCAACACCGTCGCCGATAACTGCA
ACAACACAATCGTCATCATCAACACTGTCGGCCCGCGCCTGATGGACCAG
TGGATCGAACATGACAACGTTACTGCCGTTCTCTACGGATCCCTCTTAGG
CCAGGAGTCTGGTAACTCCATCGTCGACATTCTCTACGGAGACGTGAACC
CTTCTGGCCGCCTCATTCACACCATCGCCAAAAACGAAAGTGACTACAAC
GTGAAAATCTGCTACACGGCGCAGTGTAACTTCACCGAAGGTAAAAGAGC
TTTGACATATATCTCTTCCACATATCCTTGCAAGTAGTACTTACTCATAT
ACCCTCCATAGGTGTCTATCTCGACTACCGTTACTTCGACGCCCACAACG
TCACCCCTAGATACCCCTTCGGTCACGGTCTCTCCTACACTACCTTCTCC
TACTCCGACCTGAACATCGAGAAGCCTTCCACCCTTTCCAAGTACCCCAC
TGGTGAGAAAGCTGTCGGAGGTAACAGCGACCTCTGGGATATTGTGGGAA
ACGTCTCCGTGAAGGTCGCCAACACCGGCTCGCTCGACGGCGCCGAAGTC
CCCCAGCTCTACCTCGGGTTCCCCACTGCTGCGCAGCAACCCGTTCGCCA
GCTCCGTGGCTTTGAACGCGTCGAGATCGCTTCCGGCAAGCAAAGCCAGG
TTACCTTCCAGCTGCGCCGCCGTGACATCTCCTACTGGGATGTCCCGGCC
CAGCAGTGGCTCGTTGCTTCGGGTGACTACAAGGTCTACGTGGGTGCAAG
CTCTCGGGATCTGAAGCTGAATGGCACTTTTACTGTCCAGACTTCCTCTT
AG
back to top

Coding sequence (CDS) from alignment at NKJJ01000004.1:2285643..2287494+

>CAN33_3570-T1 ID=CAN33_3570-T1|Name=CAN33_3570-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5049bp|location=Sequence derived from alignment at NKJJ01000004.1:2285643..2287494+ (Aspergillus niger FDAARGOS_311)
ATGCCCTCCGGAGGAATGGGGCCCGGTTCGTCGAATACTTCGTCCCTGGG
CGCCCAGCCTTCAGGATCAATGAGCCGTCGTGCTGCCAGTCCCAGCTCCG
AGTCAGACAGCGGCTCGGCACCATACTCTTCCAATGCCGATGACAAAACC
CTGCATGAGACGTATCTTTGGCCTTTCTATGACGCAGTCAAACATGGCCT
GGGTGCTGTGATGTGTGCCATGACCAAGGTCAATGGCACGCTAAGCTGTC
AGAACTCCGATTTGTTGATGAAGCATTTGAAGACCGAGCTTGGCTTCCCA
GGATTGGTATGGCCTGACACTAATGGCCAGAGCAGTGCGTTAGAGTCTGC
TGTTAATGGCGAGGATTACGGTTCCAGTAGTATTTGGAGCACTTCCACCA
TGGAGACCCTGTTGTCCAATGGCTCTCTAAGCGAGGCTCGCTTGGATGAT
ATGGCTGTTCGCAATCTGATGGGTTATTACTATGTTAACCTGGACAATGG
CCTCCAACCCGAGGAACAAAGTGAAGATGCGTACGTGGATGTGAGAGGCA
ACCACTCCAAGCTGATCCGGGAAAATGGAGCCAAGTCGATGGCCCTGCTG
AAGAACAAGAACGCCCTGCCTCTTAGGAAGCCTCGTGTCATGAGTGTTTT
CGGTGCCCATGCTGGTCCTGTGCTAGGGGACCTAACACGGCCATGGACAT
CGAGGGTTCGGGACCGACATGGCACCATGATGCGGTGGGTGCTCAATGAT
ACCTATTCCTCTTCTAGCACTTCCGGCTTGATCATGGAGGGAACTGACAG
CACCGCCGTGGACCCCTCGTTTGCCAATTATGCCACCAACTCTGATGCTT
GTCTCGTCTTTTTGAATGCTCTGTCCGGAGAAGGCGCTGATCGCACCGAG
CTGTACAATGATGACCAAGATACCATGGTCAACACCGTCGCCGATAACTG
CAACAACACAATCGTCATCATCAACACTGTCGGCCCGCGCCTGATGGACC
AGTGGATCGAACATGACAACGTTACTGCCGTTCTCTACGGATCCCTCTTA
GGCCAGGAGTCTGGTAACTCCATCGTCGACATTCTCTACGGAGACGTGAA
CCCTTCTGGCCGCCTCATTCACACCATCGCCAAAAACGAAAGTGACTACA
ACGTGAAAATCTGCTACACGGCGCAGTGTAACTTCACCGAAGGTGTCTAT
CTCGACTACCGTTACTTCGACGCCCACAACGTCACCCCTAGATACCCCTT
CGGTCACGGTCTCTCCTACACTACCTTCTCCTACTCCGACCTGAACATCG
AGAAGCCTTCCACCCTTTCCAAGTACCCCACTGGTGAGAAAGCTGTCGGA
GGTAACAGCGACCTCTGGGATATTGTGGGAAACGTCTCCGTGAAGGTCGC
CAACACCGGCTCGCTCGACGGCGCCGAAGTCCCCCAGCTCTACCTCGGGT
TCCCCACTGCTGCGCAGCAACCCGTTCGCCAGCTCCGTGGCTTTGAACGC
GTCGAGATCGCTTCCGGCAAGCAAAGCCAGGTTACCTTCCAGCTGCGCCG
CCGTGACATCTCCTACTGGGATGTCCCGGCCCAGCAGTGGCTCGTTGCTT
CGGGTGACTACAAGGTCTACGTGGGTGCAAGCTCTCGGGATCTGAAGCTG
AATGGCACTTTTACTGTCCAGACTTCCTCTTAGATGCCCTCCGGAGGAAT
GGGGCCCGGTTCGTCGAATACTTCGTCCCTGGGCGCCCAGCCTTCAGGAT
CAATGAGCCGTCGTGCTGCCAGTCCCAGCTCCGAGTCAGACAGCGGCTCG
GCACCATACTCTTCCAATGCCGATGACAAAACCCTGCATGAGACGTATCT
TTGGCCTTTCTATGACGCAGTCAAACATGGCCTGGGTGCTGTGATGTGTG
CCATGACCAAGGTCAATGGCACGCTAAGCTGTCAGAACTCCGATTTGTTG
ATGAAGCATTTGAAGACCGAGCTTGGCTTCCCAGGATTGGTATGGCCTGA
CACTAATGGCCAGAGCAGTGCGTTAGAGTCTGCTGTTAATGGCGAGGATT
ACGGTTCCAGTAGTATTTGGAGCACTTCCACCATGGAGACCCTGTTGTCC
AATGGCTCTCTAAGCGAGGCTCGCTTGGATGATATGGCTGTTCGCAATCT
GATGGGTTATTACTATGTTAACCTGGACAATGGCCTCCAACCCGAGGAAC
AAAGTGAAGATGCGTACGTGGATGTGAGAGGCAACCACTCCAAGCTGATC
CGGGAAAATGGAGCCAAGTCGATGGCCCTGCTGAAGAACAAGAACGCCCT
GCCTCTTAGGAAGCCTCGTGTCATGAGTGTTTTCGGTGCCCATGCTGGTC
CTGTGCTAGGGGACCTAACACGGCCATGGACATCGAGGGTTCGGGACCGA
CATGGCACCATGATGCGGTGGGTGCTCAATGATACCTATTCCTCTTCTAG
CACTTCCGGCTTGATCATGGAGGGAACTGACAGCACCGCCGTGGACCCCT
CGTTTGCCAATTATGCCACCAACTCTGATGCTTGTCTCGTCTTTTTGAAT
GCTCTGTCCGGAGAAGGCGCTGATCGCACCGAGCTGTACAATGATGACCA
AGATACCATGGTCAACACCGTCGCCGATAACTGCAACAACACAATCGTCA
TCATCAACACTGTCGGCCCGCGCCTGATGGACCAGTGGATCGAACATGAC
AACGTTACTGCCGTTCTCTACGGATCCCTCTTAGGCCAGGAGTCTGGTAA
CTCCATCGTCGACATTCTCTACGGAGACGTGAACCCTTCTGGCCGCCTCA
TTCACACCATCGCCAAAAACGAAAGTGACTACAACGTGAAAATCTGCTAC
ACGGCGCAGTGTAACTTCACCGAAGGTGTCTATCTCGACTACCGTTACTT
CGACGCCCACAACGTCACCCCTAGATACCCCTTCGGTCACGGTCTCTCCT
ACACTACCTTCTCCTACTCCGACCTGAACATCGAGAAGCCTTCCACCCTT
TCCAAGTACCCCACTGGTGAGAAAGCTGTCGGAGGTAACAGCGACCTCTG
GGATATTGTGGGAAACGTCTCCGTGAAGGTCGCCAACACCGGCTCGCTCG
ACGGCGCCGAAGTCCCCCAGCTCTACCTCGGGTTCCCCACTGCTGCGCAG
CAACCCGTTCGCCAGCTCCGTGGCTTTGAACGCGTCGAGATCGCTTCCGG
CAAGCAAAGCCAGGTTACCTTCCAGCTGCGCCGCCGTGACATCTCCTACT
GGGATGTCCCGGCCCAGCAGTGGCTCGTTGCTTCGGGTGACTACAAGGTC
TACGTGGGTGCAAGCTCTCGGGATCTGAAGCTGAATGGCACTTTTACTGT
CCAGACTTCCTCTTAGATGCCCTCCGGAGGAATGGGGCCCGGTTCGTCGA
ATACTTCGTCCCTGGGCGCCCAGCCTTCAGGATCAATGAGCCGTCGTGCT
GCCAGTCCCAGCTCCGAGTCAGACAGCGGCTCGGCACCATACTCTTCCAA
TGCCGATGACAAAACCCTGCATGAGACGTATCTTTGGCCTTTCTATGACG
CAGTCAAACATGGCCTGGGTGCTGTGATGTGTGCCATGACCAAGGTCAAT
GGCACGCTAAGCTGTCAGAACTCCGATTTGTTGATGAAGCATTTGAAGAC
CGAGCTTGGCTTCCCAGGATTGGTATGGCCTGACACTAATGGCCAGAGCA
GTGCGTTAGAGTCTGCTGTTAATGGCGAGGATTACGGTTCCAGTAGTATT
TGGAGCACTTCCACCATGGAGACCCTGTTGTCCAATGGCTCTCTAAGCGA
GGCTCGCTTGGATGATATGGCTGTTCGCAATCTGATGGGTTATTACTATG
TTAACCTGGACAATGGCCTCCAACCCGAGGAACAAAGTGAAGATGCGTAC
GTGGATGTGAGAGGCAACCACTCCAAGCTGATCCGGGAAAATGGAGCCAA
GTCGATGGCCCTGCTGAAGAACAAGAACGCCCTGCCTCTTAGGAAGCCTC
GTGTCATGAGTGTTTTCGGTGCCCATGCTGGTCCTGTGCTAGGGGACCTA
ACACGGCCATGGACATCGAGGGTTCGGGACCGACATGGCACCATGATGCG
GTGGGTGCTCAATGATACCTATTCCTCTTCTAGCACTTCCGGCTTGATCA
TGGAGGGAACTGACAGCACCGCCGTGGACCCCTCGTTTGCCAATTATGCC
ACCAACTCTGATGCTTGTCTCGTCTTTTTGAATGCTCTGTCCGGAGAAGG
CGCTGATCGCACCGAGCTGTACAATGATGACCAAGATACCATGGTCAACA
CCGTCGCCGATAACTGCAACAACACAATCGTCATCATCAACACTGTCGGC
CCGCGCCTGATGGACCAGTGGATCGAACATGACAACGTTACTGCCGTTCT
CTACGGATCCCTCTTAGGCCAGGAGTCTGGTAACTCCATCGTCGACATTC
TCTACGGAGACGTGAACCCTTCTGGCCGCCTCATTCACACCATCGCCAAA
AACGAAAGTGACTACAACGTGAAAATCTGCTACACGGCGCAGTGTAACTT
CACCGAAGGTGTCTATCTCGACTACCGTTACTTCGACGCCCACAACGTCA
CCCCTAGATACCCCTTCGGTCACGGTCTCTCCTACACTACCTTCTCCTAC
TCCGACCTGAACATCGAGAAGCCTTCCACCCTTTCCAAGTACCCCACTGG
TGAGAAAGCTGTCGGAGGTAACAGCGACCTCTGGGATATTGTGGGAAACG
TCTCCGTGAAGGTCGCCAACACCGGCTCGCTCGACGGCGCCGAAGTCCCC
CAGCTCTACCTCGGGTTCCCCACTGCTGCGCAGCAACCCGTTCGCCAGCT
CCGTGGCTTTGAACGCGTCGAGATCGCTTCCGGCAAGCAAAGCCAGGTTA
CCTTCCAGCTGCGCCGCCGTGACATCTCCTACTGGGATGTCCCGGCCCAG
CAGTGGCTCGTTGCTTCGGGTGACTACAAGGTCTACGTGGGTGCAAGCTC
TCGGGATCTGAAGCTGAATGGCACTTTTACTGTCCAGACTTCCTCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3570CAN33_3570Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3570-T1.exon1CAN33_3570-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3570-T1.exon2CAN33_3570-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3570-T1.exon3CAN33_3570-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3570-T1.cdsCAN33_3570-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3570-T1CAN33_3570-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR002772
DBxrefInterPro:IPR036881
DBxrefInterPro:IPR001764
DBxrefInterPro:IPR013783
DBxrefInterPro:IPR036962
DBxrefInterPro:IPR026891
DBxrefPFAM:PF01915
DBxrefPFAM:PF14310
ProductGlycosyl hydrolase family 3 C-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2285643..2287494 +
Powered by Drupal