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CAN33_36320-T1, CAN33_36320-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_36320-T1
Unique NameCAN33_36320-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:122570..124018-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_36320-T1 ID=CAN33_36320-T1|Name=CAN33_36320-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1449bp|location=Sequence derived from alignment at NKJJ01000017.1:122570..124018- (Aspergillus niger FDAARGOS_311)
ATGCCCTCAGCCATCAGTATTGGAGTTTTCGCGGGCCTGAGTCTCGCTGC
TTCGGCCGTACCTTCTCTCCGGAAGAATGGCACTACCTGTACCGTCATCC
CTTTAGGAAACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGAC
GAATGTGGCCAGACCTCTGGAGGGAGAGTTGTCCTCCCAGCGCCGTATAC
CTACCGGATTAACCAACGGATGACGACTCACCTGACCGATTCCCGCCTCG
AGATCGGTGGTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAAC
AACTCCTACCGGGTGGACTTCCAGAACCAGTCAAGTGCCTGGCGTATCAC
GGGTCATGACTATGTTGTGGATGGAGGTCCACATCGAGGTGGAGTGGATG
GGAATGGACAGCTGTGGTACACTTGGGCCAAGGGAGGTAGCAATGTCTTC
GGACGACCGATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCG
TAACCTGGCAATCCGACAACCTCAGTTTTGGGCAGTTCTTGTCGATTCCT
CTTCGCACATCAACCTCGATAATTTCTACGTGAATGCCACAAACCATGAC
TCCTCGGTGAGCCCAGAGGGCGAGTGGGTGCAGAATACGGATGGGATCGA
CACGTACCGATCCGACCATATTACAATTACCAACTGGGTGTACCAAGGCG
GAGACGATGCAGTGGCTTTCAAGGGGAACTCGACGAACATCCATGTGGAG
AATGTCACGGTTTATGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGACA
ATACCCCGACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTTC
GAGTAAGTAAGGCTCGGAGGCATGATGGCATTTGAATTGACAGGTATAGG
TGCAACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAAGAGC
TGGTAGGTACCTGGTCCTTCACAGCGATCGCTAGCTGACCAGGCAGGATC
GGGGTCAATTATGGTGTTCCTCCGAATGGTGGCGGGGGCGGCCATGGATA
CGTGCGCAACGTCTCAGTCGAAAACCTTCGACTCAAGGATGTGCAGTTAC
CTGTGTATATTGACACCTGGTGAGGGCGATACCACCATGTTTGAGGTACT
CGGCTAACCCGGGCAGCTTGAGCTATCTCTTCAGCGAGAACATCACGCAG
TATTGTGACACATCGACGTACGAATTCGAGGACCTCCACTTCAGAAACAT
CAGCGGCAATGGACTCGCAACGGTGACTGATTACCCGGGGAAGAATATCA
GCTTCGCCGTGGCTTTGCTTTGTTCTGAGAAGGCACCGTGTACGGACTTG
ACCTTCCAGGACATCAGTATTACGCTTCCAGGGAACTATACTGGCAAACA
TGTACTGTGCGAGAATGCTGAGGTGGAGGGGCTCCCATGCAATTCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:122570..124018-

>CAN33_36320-T1 ID=CAN33_36320-T1|Name=CAN33_36320-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5244bp|location=Sequence derived from alignment at NKJJ01000017.1:122570..124018- (Aspergillus niger FDAARGOS_311)
CTTGAGCTATCTCTTCAGCGAGAACATCACGCAGTATTGTGACACATCGA
CGTACGAATTCGAGGACCTCCACTTCAGAAACATCAGCGGCAATGGACTC
GCAACGGTGACTGATTACCCGGGGAAGAATATCAGCTTCGCCGTGGCTTT
GCTTTGTTCTGAGAAGGCACCGTGTACGGACTTGACCTTCCAGGACATCA
GTATTACGCTTCCAGGGAACTATACTGGCAAACATGTACTGTGCGAGAAT
GCTGAGGTGGAGGGGCTCCCATGCAATTCGTGAGATCGGGGTCAATTATG
GTGTTCCTCCGAATGGTGGCGGGGGCGGCCATGGATACGTGCGCAACGTC
TCAGTCGAAAACCTTCGACTCAAGGATGTGCAGTTACCTGTGTATATTGA
CACCTGGTGCAACCGTCCTTCCAACGGGCGATGAATTCCGGGGTTTACTT
CAAGAGCTGATGCCCTCAGCCATCAGTATTGGAGTTTTCGCGGGCCTGAG
TCTCGCTGCTTCGGCCGTACCTTCTCTCCGGAAGAATGGCACTACCTGTA
CCGTCATCCCTTTAGGAAACGGACAGGATGATGTCCCCAACATCCTCTCG
GCCGTTGACGAATGTGGCCAGACCTCTGGAGGGAGAGTTGTCCTCCCAGC
GCCGTATACCTACCGGATTAACCAACGGATGACGACTCACCTGACCGATT
CCCGCCTCGAGATCGGTGGTACGCTTCTCTTCAGCGACGATATCGACTAC
TGGGTCAACAACTCCTACCGGGTGGACTTCCAGAACCAGTCAAGTGCCTG
GCGTATCACGGGTCATGACTATGTTGTGGATGGAGGTCCACATCGAGGTG
GAGTGGATGGGAATGGACAGCTGTGGTACACTTGGGCCAAGGGAGGTAGC
AATGTCTTCGGACGACCGATGCCAGTGCATGTGTTCGAGTCGACGCGAGC
AACCCTGCGTAACCTGGCAATCCGACAACCTCAGTTTTGGGCAGTTCTTG
TCGATTCCTCTTCGCACATCAACCTCGATAATTTCTACGTGAATGCCACA
AACCATGACTCCTCGGTGAGCCCAGAGGGCGAGTGGGTGCAGAATACGGA
TGGGATCGACACGTACCGATCCGACCATATTACAATTACCAACTGGGTGT
ACCAAGGCGGAGACGATGCAGTGGCTTTCAAGGGGAACTCGACGAACATC
CATGTGGAGAATGTCACGGTTTATGGCGGACCGGGCATCGCTTTTGGGTC
GCTGGGACAATACCCCGACCGGACGGATATTGTGGAGAATGTGACGGTTC
GGAATGTTCGACTTGAGCTATCTCTTCAGCGAGAACATCACGCAGTATTG
TGACACATCGACGTACGAATTCGAGGACCTCCACTTCAGAAACATCAGCG
GCAATGGACTCGCAACGGTGACTGATTACCCGGGGAAGAATATCAGCTTC
GCCGTGGCTTTGCTTTGTTCTGAGAAGGCACCGTGTACGGACTTGACCTT
CCAGGACATCAGTATTACGCTTCCAGGGAACTATACTGGCAAACATGTAC
TGTGCGAGAATGCTGAGGTGGAGGGGCTCCCATGCAATTCGTGAGATCGG
GGTCAATTATGGTGTTCCTCCGAATGGTGGCGGGGGCGGCCATGGATACG
TGCGCAACGTCTCAGTCGAAAACCTTCGACTCAAGGATGTGCAGTTACCT
GTGTATATTGACACCTGGTGCAACCGTCCTTCCAACGGGCGATGAATTCC
GGGGTTTACTTCAAGAGCTGATGCCCTCAGCCATCAGTATTGGAGTTTTC
GCGGGCCTGAGTCTCGCTGCTTCGGCCGTACCTTCTCTCCGGAAGAATGG
CACTACCTGTACCGTCATCCCTTTAGGAAACGGACAGGATGATGTCCCCA
ACATCCTCTCGGCCGTTGACGAATGTGGCCAGACCTCTGGAGGGAGAGTT
GTCCTCCCAGCGCCGTATACCTACCGGATTAACCAACGGATGACGACTCA
CCTGACCGATTCCCGCCTCGAGATCGGTGGTACGCTTCTCTTCAGCGACG
ATATCGACTACTGGGTCAACAACTCCTACCGGGTGGACTTCCAGAACCAG
TCAAGTGCCTGGCGTATCACGGGTCATGACTATGTTGTGGATGGAGGTCC
ACATCGAGGTGGAGTGGATGGGAATGGACAGCTGTGGTACACTTGGGCCA
AGGGAGGTAGCAATGTCTTCGGACGACCGATGCCAGTGCATGTGTTCGAG
TCGACGCGAGCAACCCTGCGTAACCTGGCAATCCGACAACCTCAGTTTTG
GGCAGTTCTTGTCGATTCCTCTTCGCACATCAACCTCGATAATTTCTACG
TGAATGCCACAAACCATGACTCCTCGGTGAGCCCAGAGGGCGAGTGGGTG
CAGAATACGGATGGGATCGACACGTACCGATCCGACCATATTACAATTAC
CAACTGGGTGTACCAAGGCGGAGACGATGCAGTGGCTTTCAAGGGGAACT
CGACGAACATCCATGTGGAGAATGTCACGGTTTATGGCGGACCGGGCATC
GCTTTTGGGTCGCTGGGACAATACCCCGACCGGACGGATATTGTGGAGAA
TGTGACGGTTCGGAATGTTCGACTTGAGCTATCTCTTCAGCGAGAACATC
ACGCAGTATTGTGACACATCGACGTACGAATTCGAGGACCTCCACTTCAG
AAACATCAGCGGCAATGGACTCGCAACGGTGACTGATTACCCGGGGAAGA
ATATCAGCTTCGCCGTGGCTTTGCTTTGTTCTGAGAAGGCACCGTGTACG
GACTTGACCTTCCAGGACATCAGTATTACGCTTCCAGGGAACTATACTGG
CAAACATGTACTGTGCGAGAATGCTGAGGTGGAGGGGCTCCCATGCAATT
CGTGAGATCGGGGTCAATTATGGTGTTCCTCCGAATGGTGGCGGGGGCGG
CCATGGATACGTGCGCAACGTCTCAGTCGAAAACCTTCGACTCAAGGATG
TGCAGTTACCTGTGTATATTGACACCTGGTGCAACCGTCCTTCCAACGGG
CGATGAATTCCGGGGTTTACTTCAAGAGCTGATGCCCTCAGCCATCAGTA
TTGGAGTTTTCGCGGGCCTGAGTCTCGCTGCTTCGGCCGTACCTTCTCTC
CGGAAGAATGGCACTACCTGTACCGTCATCCCTTTAGGAAACGGACAGGA
TGATGTCCCCAACATCCTCTCGGCCGTTGACGAATGTGGCCAGACCTCTG
GAGGGAGAGTTGTCCTCCCAGCGCCGTATACCTACCGGATTAACCAACGG
ATGACGACTCACCTGACCGATTCCCGCCTCGAGATCGGTGGTACGCTTCT
CTTCAGCGACGATATCGACTACTGGGTCAACAACTCCTACCGGGTGGACT
TCCAGAACCAGTCAAGTGCCTGGCGTATCACGGGTCATGACTATGTTGTG
GATGGAGGTCCACATCGAGGTGGAGTGGATGGGAATGGACAGCTGTGGTA
CACTTGGGCCAAGGGAGGTAGCAATGTCTTCGGACGACCGATGCCAGTGC
ATGTGTTCGAGTCGACGCGAGCAACCCTGCGTAACCTGGCAATCCGACAA
CCTCAGTTTTGGGCAGTTCTTGTCGATTCCTCTTCGCACATCAACCTCGA
TAATTTCTACGTGAATGCCACAAACCATGACTCCTCGGTGAGCCCAGAGG
GCGAGTGGGTGCAGAATACGGATGGGATCGACACGTACCGATCCGACCAT
ATTACAATTACCAACTGGGTGTACCAAGGCGGAGACGATGCAGTGGCTTT
CAAGGGGAACTCGACGAACATCCATGTGGAGAATGTCACGGTTTATGGCG
GACCGGGCATCGCTTTTGGGTCGCTGGGACAATACCCCGACCGGACGGAT
ATTGTGGAGAATGTGACGGTTCGGAATGTTCGACTTGAGCTATCTCTTCA
GCGAGAACATCACGCAGTATTGTGACACATCGACGTACGAATTCGAGGAC
CTCCACTTCAGAAACATCAGCGGCAATGGACTCGCAACGGTGACTGATTA
CCCGGGGAAGAATATCAGCTTCGCCGTGGCTTTGCTTTGTTCTGAGAAGG
CACCGTGTACGGACTTGACCTTCCAGGACATCAGTATTACGCTTCCAGGG
AACTATACTGGCAAACATGTACTGTGCGAGAATGCTGAGGTGGAGGGGCT
CCCATGCAATTCGTGAGATCGGGGTCAATTATGGTGTTCCTCCGAATGGT
GGCGGGGGCGGCCATGGATACGTGCGCAACGTCTCAGTCGAAAACCTTCG
ACTCAAGGATGTGCAGTTACCTGTGTATATTGACACCTGGTGCAACCGTC
CTTCCAACGGGCGATGAATTCCGGGGTTTACTTCAAGAGCTGATGCCCTC
AGCCATCAGTATTGGAGTTTTCGCGGGCCTGAGTCTCGCTGCTTCGGCCG
TACCTTCTCTCCGGAAGAATGGCACTACCTGTACCGTCATCCCTTTAGGA
AACGGACAGGATGATGTCCCCAACATCCTCTCGGCCGTTGACGAATGTGG
CCAGACCTCTGGAGGGAGAGTTGTCCTCCCAGCGCCGTATACCTACCGGA
TTAACCAACGGATGACGACTCACCTGACCGATTCCCGCCTCGAGATCGGT
GGTACGCTTCTCTTCAGCGACGATATCGACTACTGGGTCAACAACTCCTA
CCGGGTGGACTTCCAGAACCAGTCAAGTGCCTGGCGTATCACGGGTCATG
ACTATGTTGTGGATGGAGGTCCACATCGAGGTGGAGTGGATGGGAATGGA
CAGCTGTGGTACACTTGGGCCAAGGGAGGTAGCAATGTCTTCGGACGACC
GATGCCAGTGCATGTGTTCGAGTCGACGCGAGCAACCCTGCGTAACCTGG
CAATCCGACAACCTCAGTTTTGGGCAGTTCTTGTCGATTCCTCTTCGCAC
ATCAACCTCGATAATTTCTACGTGAATGCCACAAACCATGACTCCTCGGT
GAGCCCAGAGGGCGAGTGGGTGCAGAATACGGATGGGATCGACACGTACC
GATCCGACCATATTACAATTACCAACTGGGTGTACCAAGGCGGAGACGAT
GCAGTGGCTTTCAAGGGGAACTCGACGAACATCCATGTGGAGAATGTCAC
GGTTTATGGCGGACCGGGCATCGCTTTTGGGTCGCTGGGACAATACCCCG
ACCGGACGGATATTGTGGAGAATGTGACGGTTCGGAATGTTCGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_36320CAN33_36320Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36320-T1CAN33_36320-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36320-T1.cdsCAN33_36320-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36320-T1.exon4CAN33_36320-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_36320-T1.exon3CAN33_36320-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_36320-T1.exon2CAN33_36320-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_36320-T1.exon1CAN33_36320-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
ProductGlycosyl hydrolases family 28 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:122570..124018 -
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