You are here

Home

CAN33_36350-T1, CAN33_36350-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_36350-T1
Unique NameCAN33_36350-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:138791..139612+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_36350-T1 ID=CAN33_36350-T1|Name=CAN33_36350-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=822bp|location=Sequence derived from alignment at NKJJ01000017.1:138791..139612+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCCCCCTTGCCATTGAGGTCATCCAGCGACATCATTTATTCTCA
GCATCTGTCTCTCTTTCTCTGCGTCCCTCATTCCCTAATCCAATCCTCCA
CATACCCGGCCAAGATGAAGGCATTCAAACAATCGCTTTTGGCGCTCTCG
CTTACATCAGTGGCTGTTGCAGCAGCATCTTGCAACACAACAGCCCTGAA
CACGACCACTTATAATTATTATATTACGGTGGATGGCACAACAGTCTTTG
ACGTTGCGCGCGCCACCAACCGCGGTGTCTGTGACATCGGCCGCCAAAAC
CTCATGGCGGATGTAACCATCGTTCCCAATGTGGGCGAGTACTTCATCAT
CCCTCCCGAGGTGTGCGAGCCAGACAATACATCCTGTCTCTTGCCAAACA
TCAATGCTACACGCACCTGTATCTACGGCGGCCCTCGTCTCTACTACACT
GTTCGAGGAGATACCTACGAAGTGATTGCCCGCCGACTCAACATCACAGT
GGAATCGTTGATGCACGTGGATGGGCCTTCAAACGAGACGCTCGTCAATC
CTATCTCCCCGACGGCGGAGTTGGATGTTGGCCAGTTTATCAAGGTGCCT
CAGTGCGATCCTAGCCAGTGTGTCATTCAGCCTTACGTCTTCAAATGGGG
TGTGTACAAGGACCTTGCAGACAAGTACGGCACTACCGTGGGCCAGATCA
TGATGATGAGCCCGACGTACAACTACAGCAGTCTGGCTTTCTCCCCTGAG
GGCATGTTCCCTCCCATCAACCTGCCGATTAACTGCACGGGATTGTCGAA
CAACATGACTACTCTTGATTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:138791..139612+

>CAN33_36350-T1 ID=CAN33_36350-T1|Name=CAN33_36350-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=822bp|location=Sequence derived from alignment at NKJJ01000017.1:138791..139612+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCCCCCTTGCCATTGAGGTCATCCAGCGACATCATTTATTCTCA
GCATCTGTCTCTCTTTCTCTGCGTCCCTCATTCCCTAATCCAATCCTCCA
CATACCCGGCCAAGATGAAGGCATTCAAACAATCGCTTTTGGCGCTCTCG
CTTACATCAGTGGCTGTTGCAGCAGCATCTTGCAACACAACAGCCCTGAA
CACGACCACTTATAATTATTATATTACGGTGGATGGCACAACAGTCTTTG
ACGTTGCGCGCGCCACCAACCGCGGTGTCTGTGACATCGGCCGCCAAAAC
CTCATGGCGGATGTAACCATCGTTCCCAATGTGGGCGAGTACTTCATCAT
CCCTCCCGAGGTGTGCGAGCCAGACAATACATCCTGTCTCTTGCCAAACA
TCAATGCTACACGCACCTGTATCTACGGCGGCCCTCGTCTCTACTACACT
GTTCGAGGAGATACCTACGAAGTGATTGCCCGCCGACTCAACATCACAGT
GGAATCGTTGATGCACGTGGATGGGCCTTCAAACGAGACGCTCGTCAATC
CTATCTCCCCGACGGCGGAGTTGGATGTTGGCCAGTTTATCAAGGTGCCT
CAGTGCGATCCTAGCCAGTGTGTCATTCAGCCTTACGTCTTCAAATGGGG
TGTGTACAAGGACCTTGCAGACAAGTACGGCACTACCGTGGGCCAGATCA
TGATGATGAGCCCGACGTACAACTACAGCAGTCTGGCTTTCTCCCCTGAG
GGCATGTTCCCTCCCATCAACCTGCCGATTAACTGCACGGGATTGTCGAA
CAACATGACTACTCTTGATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_36350CAN33_36350Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36350-T1.exon1CAN33_36350-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36350-T1.cdsCAN33_36350-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36350-T1CAN33_36350-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036779
DBxrefInterPro:IPR018392
DBxrefPFAM:PF01476
ProductLysM domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:138791..139612 +
Powered by Drupal