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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:533588..535270+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_36935-T1 ID=CAN33_36935-T1|Name=CAN33_36935-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1683bp|location=Sequence derived from alignment at NKJJ01000017.1:533588..535270+ (Aspergillus niger FDAARGOS_311)
ATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGATGCTCCCTC
GACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTTCTGAACCCC
CTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACATGTCTTGTTG
TCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGGCAACTCGTC
GGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTGCCTTTGGAT
CCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTCTTCAAATAC
ACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACCGGGTGAATT
CGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCTTGGAGACGA
TGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGGTAAGTCACTG
GCTCTTTGTCCGCTCCTTTGGGCAAACGACGACCATGGGGTCTTGTAAGA
CATGACGTATGTGCATTTGTCGCTGATCTCTCACATAGCATTTATCGAAG
CCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTCTCAGTTCCTC
GCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAACCAGAGTTGGA
AATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAGTTCTACGACT
CGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACAGAATGACGTC
TATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATACTCTTATCAG
TATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTACCAGGTGCGT
TCTTGGACAACTTGTTGGGGGAGGATATGGGTTGTCCGCGGTCGCTAATT
TTGTTTCTTATGATGTCAGGCTTCCACAAGACTTCGGTCGCATACCAGTC
CACCGGTCATAGGAGGCACAACCAGCCATTTGCACCAACACCGTACGGTC
CTCACCTTTTGCAAGGTGATGTGATCGGTGTGGGGTATCGACCACGCTCG
GGTACAATTTTCTTCACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCA
CGGTCATAAAGCGCAGAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTT
GCTCCGTCCATGTGAACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCC
AACGTCAAGAAATGGGGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCC
TCCGCCTTACGGCAGCGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGG
AGAGTGCAGCTCAGATTTCTCAACGGGTCTATCAGGATGCCAATAATGCG
CGCACCAGTTCGACTGTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGT
GCGATCACCCACCGATATATCCCTGGCTCAGCTTGCCCACATCCCGTCGA
ACGAGGACGTAGGCGAAGGATCCAGTCGGACCAATGTCGTCGATGGAGAG
CAAGTCCCCTTGTTGCATACGAACGATCTCGACCAAGTCCCGCCTCCCGA
ATATTCCAGCCCGGATGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTG
ACGAACAGCCTCCGATACCCAGCTACGACGCTGCTGTTGGCAACCGGGAC
GGTCACAGCGCGCATGCCAACGAGAATCGTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:533588..535270+ >CAN33_36935-T1 ID=CAN33_36935-T1|Name=CAN33_36935-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4527bp|location=Sequence derived from alignment at NKJJ01000017.1:533588..535270+ (Aspergillus niger FDAARGOS_311)
ATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGATGCTCCCTC
GACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTTCTGAACCCC
CTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACATGTCTTGTTG
TCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGGCAACTCGTC
GGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTGCCTTTGGAT
CCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTCTTCAAATAC
ACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACCGGGTGAATT
CGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCTTGGAGACGA
TGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGCATTTATCGAA
GCCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTCTCAGTTCCT
CGCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAACCAGAGTTGG
AAATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAGTTCTACGAC
TCGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACAGAATGACGT
CTATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATACTCTTATCA
GTATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTACCAGGCTTC
CACAAGACTTCGGTCGCATACCAGTCCACCGGTCATAGGAGGCACAACCA
GCCATTTGCACCAACACCGTACGGTCCTCACCTTTTGCAAGGTGATGTGA
TCGGTGTGGGGTATCGACCACGCTCGGGTACAATTTTCTTCACTCGCAAT
GGCAAGAAGCTGGAGGACGTTGTCCACGGTCATAAAGCGCAGAATTTCTT
CCCCACTGTTGGAGCCAATGGGCCTTGCTCCGTCCATGTGAACTTTGGTC
AGATGGGCTTCGTGTTCATTGAGGCCAACGTCAAGAAATGGGGCCTGGCC
CCGATGACTGGTAGTCTGGCTCCGCCTCCGCCTTACGGCAGCGAGCAAGG
CAGCATCCTGCTAGAGTCGGGTCGGGAGAGTGCAGCTCAGATTTCTCAAC
GGGTCTATCAGGATGCCAATAATGCGCGCACCAGTTCGACTGTCCGTGTT
GCGCCTTCTGCCAGTCCCGGCCCTGTGCGATCACCCACCGATATATCCCT
GGCTCAGCTTGCCCACATCCCGTCGAACGAGGACGTAGGCGAAGGATCCA
GTCGGACCAATGTCGTCGATGGAGAGCAAGTCCCCTTGTTGCATACGAAC
GATCTCGACCAAGTCCCGCCTCCCGAATATTCCAGCCCGGATGGCAGTCG
GAGAGGCAGCGAGGATCTGCCCTTTGACGAACAGCCTCCGATACCCAGCT
ACGACGCTGCTGTTGGCAACCGGGACGGTCACAGCGCGCATGCCAACGAG
AATCGTTAGATGCGGGGATCTGAGGCATCGGGGCCCGGTGCTCTCTTTGA
TGCTCCCTCGACTCTTGCCACGTCCCTTGGAATCAATCCCACCGCTGCTT
CTGAACCCCCTCCGACCGATCCCAAACTAGTCGCCTCGAACATTGAACAT
GTCTTGTTGTCCATGTCAGAAGGCAATGGCGGTCTAGTTAGCGTCAGTGG
CAACTCGTCGGGTTCTACCGGCAAGGGTATCCTGATAGGCGTCCTCTCTG
CCTTTGGATCCGCCGCCGTTGCAGTGCTTGTACTCGCTGTTTTCTTTTTC
TTCAAATACACTCAGCGTGGTAGAATTATTCTCGATCGCATCGGCCGACC
GGGTGAATTCGACGATGAGCAAGCGTTTGCGCGCGAGGAGGCGGAAGCCT
TGGAGACGATGGATGACCTCACGCGATCGGAGTATATGAGAGCGAAGGCA
TTTATCGAAGCCAATCCGCCCGAGTCCGTACAAACCGACATATCACTCTC
TCAGTTCCTCGCGATTCAAGAAAAAGGAGTATCGGCTTGGGAGTTTCAAC
CAGAGTTGGAAATCGCCAATTGCTTTGTCGAAGGCCGTACGGAAATCGAG
TTCTACGACTCGGAATGCAGTGTCCAGACCAATTTGCCCGTTCCGAAACA
GAATGACGTCTATTACTGGGAGGCTAAGATCTACGACAAACCTGATAATA
CTCTTATCAGTATTGGGATGACTACGAAACCGTATCCTTTGTTCAAATTA
CCAGGCTTCCACAAGACTTCGGTCGCATACCAGTCCACCGGTCATAGGAG
GCACAACCAGCCATTTGCACCAACACCGTACGGTCCTCACCTTTTGCAAG
GTGATGTGATCGGTGTGGGGTATCGACCACGCTCGGGTACAATTTTCTTC
ACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCACGGTCATAAAGCGCA
GAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTTGCTCCGTCCATGTGA
ACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCCAACGTCAAGAAATGG
GGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCCTCCGCCTTACGGCAG
CGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGGAGAGTGCAGCTCAGA
TTTCTCAACGGGTCTATCAGGATGCCAATAATGCGCGCACCAGTTCGACT
GTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGTGCGATCACCCACCGA
TATATCCCTGGCTCAGCTTGCCCACATCCCGTCGAACGAGGACGTAGGCG
AAGGATCCAGTCGGACCAATGTCGTCGATGGAGAGCAAGTCCCCTTGTTG
CATACGAACGATCTCGACCAAGTCCCGCCTCCCGAATATTCCAGCCCGGA
TGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTGACGAACAGCCTCCGA
TACCCAGCTACGACGCTGCTGTTGGCAACCGGGACGGTCACAGCGCGCAT
GCCAACGAGAATCGTTAGATGCGGGGATCTGAGGCATCGGGGCCCGGTGC
TCTCTTTGATGCTCCCTCGACTCTTGCCACGTCCCTTGGAATCAATCCCA
CCGCTGCTTCTGAACCCCCTCCGACCGATCCCAAACTAGTCGCCTCGAAC
ATTGAACATGTCTTGTTGTCCATGTCAGAAGGCAATGGCGGTCTAGTTAG
CGTCAGTGGCAACTCGTCGGGTTCTACCGGCAAGGGTATCCTGATAGGCG
TCCTCTCTGCCTTTGGATCCGCCGCCGTTGCAGTGCTTGTACTCGCTGTT
TTCTTTTTCTTCAAATACACTCAGCGTGGTAGAATTATTCTCGATCGCAT
CGGCCGACCGGGTGAATTCGACGATGAGCAAGCGTTTGCGCGCGAGGAGG
CGGAAGCCTTGGAGACGATGGATGACCTCACGCGATCGGAGTATATGAGA
GCGAAGGCATTTATCGAAGCCAATCCGCCCGAGTCCGTACAAACCGACAT
ATCACTCTCTCAGTTCCTCGCGATTCAAGAAAAAGGAGTATCGGCTTGGG
AGTTTCAACCAGAGTTGGAAATCGCCAATTGCTTTGTCGAAGGCCGTACG
GAAATCGAGTTCTACGACTCGGAATGCAGTGTCCAGACCAATTTGCCCGT
TCCGAAACAGAATGACGTCTATTACTGGGAGGCTAAGATCTACGACAAAC
CTGATAATACTCTTATCAGTATTGGGATGACTACGAAACCGTATCCTTTG
TTCAAATTACCAGGCTTCCACAAGACTTCGGTCGCATACCAGTCCACCGG
TCATAGGAGGCACAACCAGCCATTTGCACCAACACCGTACGGTCCTCACC
TTTTGCAAGGTGATGTGATCGGTGTGGGGTATCGACCACGCTCGGGTACA
ATTTTCTTCACTCGCAATGGCAAGAAGCTGGAGGACGTTGTCCACGGTCA
TAAAGCGCAGAATTTCTTCCCCACTGTTGGAGCCAATGGGCCTTGCTCCG
TCCATGTGAACTTTGGTCAGATGGGCTTCGTGTTCATTGAGGCCAACGTC
AAGAAATGGGGCCTGGCCCCGATGACTGGTAGTCTGGCTCCGCCTCCGCC
TTACGGCAGCGAGCAAGGCAGCATCCTGCTAGAGTCGGGTCGGGAGAGTG
CAGCTCAGATTTCTCAACGGGTCTATCAGGATGCCAATAATGCGCGCACC
AGTTCGACTGTCCGTGTTGCGCCTTCTGCCAGTCCCGGCCCTGTGCGATC
ACCCACCGATATATCCCTGGCTCAGCTTGCCCACATCCCGTCGAACGAGG
ACGTAGGCGAAGGATCCAGTCGGACCAATGTCGTCGATGGAGAGCAAGTC
CCCTTGTTGCATACGAACGATCTCGACCAAGTCCCGCCTCCCGAATATTC
CAGCCCGGATGGCAGTCGGAGAGGCAGCGAGGATCTGCCCTTTGACGAAC
AGCCTCCGATACCCAGCTACGACGCTGCTGTTGGCAACCGGGACGGTCAC
AGCGCGCATGCCAACGAGAATCGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR035780 |
| DBxref | InterPro:IPR001870 |
| DBxref | InterPro:IPR003877 |
| DBxref | PFAM:PF00622 |
| Product | sorting of cargo proteins at the multivesicular body |
| Product | Rsp5p-dependent ubiquitination |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:533588..535270 + |
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