|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:653172..654068+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_37100-T1 ID=CAN33_37100-T1|Name=CAN33_37100-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=897bp|location=Sequence derived from alignment at NKJJ01000017.1:653172..654068+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCCTCAGAACAAGTCCAGCTGGACAACTTCCCCACCATCTTCTC
CCTGGAGGGAAAAGTTGCCCTCGTCACCGGGGGCTCTCGCGGTTTGGGTC
TGCACACCGCCAGTGGGTAGGACAGAAGCAATCGCCCCAGAATGAACCAG
GTTCTCACCAATTAGTCTAGTCTCCTCCAATCGGGCTGTTCCAAGGTCTA
TATCACCTCGCGCAAGGCGTCTGCCTGCGCCGAAGCCGTTGCGGCCCTAA
ATGCTCTCCCCAACAAACCCCCGCACGCCACCGCCATCGCCGTCCCCGCC
GACAACTCTAATATGGAGGAGCTAGACCGGCTTGTCGCAGAGGTCTCCAA
GACCACCTCCCATCTCGACATCCTCTTCGCCAACGCCGGTGCAACATGGG
GCCAAGGATTTGATACCTACCCAGAGGACAAGTTCAGCAAGGTCATGGAC
CTGAATGTGAAGAGCGTCTTCTACACCATCCAAAAATTCACCCCCCTGCT
GACGGCACGGGCCACCAAAGATGATCCGTCGCGGGTTATCGTGACAGGCT
CAACTGCAGGCATTACACTGGGCAGTCTAGGCCCCAGTGCGACCTTCAGT
TACTCTGCCTCCAAGGCAGCTGTGATGCATCTCGTCCGGAACTTGGCGGT
CGATTTGGGCCCCCGACACATCCTGTGTAATGCCATTGCGCCAGGGTTCT
TCCCGTCCAAGATGGCGAATGGGCTGATCAAGATCAAGGGAGGACTGGAA
GATCTAGAACGGAGGTCGCCAAACGGAAGGCTGGGCAGAAAGGAGGATAT
TGCGGGCTTGGTGGTGTTTCTGGCCAGTCGGGCAGCAAGCCACTTGAATG
GAGCGGTGATTCCCATCGACGGGGGTAATCATTTGGCACGATTGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:653172..654068+ >CAN33_37100-T1 ID=CAN33_37100-T1|Name=CAN33_37100-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1686bp|location=Sequence derived from alignment at NKJJ01000017.1:653172..654068+ (Aspergillus niger FDAARGOS_311)
ATGTCTGCCTCAGAACAAGTCCAGCTGGACAACTTCCCCACCATCTTCTC
CCTGGAGGGAAAAGTTGCCCTCGTCACCGGGGGCTCTCGCGGTTTGGGTC
TGCACACCGCCAGTGGTCTCCTCCAATCGGGCTGTTCCAAGGTCTATATC
ACCTCGCGCAAGGCGTCTGCCTGCGCCGAAGCCGTTGCGGCCCTAAATGC
TCTCCCCAACAAACCCCCGCACGCCACCGCCATCGCCGTCCCCGCCGACA
ACTCTAATATGGAGGAGCTAGACCGGCTTGTCGCAGAGGTCTCCAAGACC
ACCTCCCATCTCGACATCCTCTTCGCCAACGCCGGTGCAACATGGGGCCA
AGGATTTGATACCTACCCAGAGGACAAGTTCAGCAAGGTCATGGACCTGA
ATGTGAAGAGCGTCTTCTACACCATCCAAAAATTCACCCCCCTGCTGACG
GCACGGGCCACCAAAGATGATCCGTCGCGGGTTATCGTGACAGGCTCAAC
TGCAGGCATTACACTGGGCAGTCTAGGCCCCAGTGCGACCTTCAGTTACT
CTGCCTCCAAGGCAGCTGTGATGCATCTCGTCCGGAACTTGGCGGTCGAT
TTGGGCCCCCGACACATCCTGTGTAATGCCATTGCGCCAGGGTTCTTCCC
GTCCAAGATGGCGAATGGGCTGATCAAGATCAAGGGAGGACTGGAAGATC
TAGAACGGAGGTCGCCAAACGGAAGGCTGGGCAGAAAGGAGGATATTGCG
GGCTTGGTGGTGTTTCTGGCCAGTCGGGCAGCAAGCCACTTGAATGGAGC
GGTGATTCCCATCGACGGGGGTAATCATTTGGCACGATTGTAAATGTCTG
CCTCAGAACAAGTCCAGCTGGACAACTTCCCCACCATCTTCTCCCTGGAG
GGAAAAGTTGCCCTCGTCACCGGGGGCTCTCGCGGTTTGGGTCTGCACAC
CGCCAGTGGTCTCCTCCAATCGGGCTGTTCCAAGGTCTATATCACCTCGC
GCAAGGCGTCTGCCTGCGCCGAAGCCGTTGCGGCCCTAAATGCTCTCCCC
AACAAACCCCCGCACGCCACCGCCATCGCCGTCCCCGCCGACAACTCTAA
TATGGAGGAGCTAGACCGGCTTGTCGCAGAGGTCTCCAAGACCACCTCCC
ATCTCGACATCCTCTTCGCCAACGCCGGTGCAACATGGGGCCAAGGATTT
GATACCTACCCAGAGGACAAGTTCAGCAAGGTCATGGACCTGAATGTGAA
GAGCGTCTTCTACACCATCCAAAAATTCACCCCCCTGCTGACGGCACGGG
CCACCAAAGATGATCCGTCGCGGGTTATCGTGACAGGCTCAACTGCAGGC
ATTACACTGGGCAGTCTAGGCCCCAGTGCGACCTTCAGTTACTCTGCCTC
CAAGGCAGCTGTGATGCATCTCGTCCGGAACTTGGCGGTCGATTTGGGCC
CCCGACACATCCTGTGTAATGCCATTGCGCCAGGGTTCTTCCCGTCCAAG
ATGGCGAATGGGCTGATCAAGATCAAGGGAGGACTGGAAGATCTAGAACG
GAGGTCGCCAAACGGAAGGCTGGGCAGAAAGGAGGATATTGCGGGCTTGG
TGGTGTTTCTGGCCAGTCGGGCAGCAAGCCACTTGAATGGAGCGGTGATT
CCCATCGACGGGGGTAATCATTTGGCACGATTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:653172..654068 + |
|
