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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:681690..684564+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_37130-T1 ID=CAN33_37130-T1|Name=CAN33_37130-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2875bp|location=Sequence derived from alignment at NKJJ01000017.1:681690..684564+ (Aspergillus niger FDAARGOS_311)
ATGTTGTTTGTGTCGTACGTTTTCCTGCTGCTGAGTGTGCCAGTGGCCTT
GGTCAATGCTGTCCCTACGTCCGGCTCTGTCGATGTGACATCCCATCTGG
CGGTGCGCGCGTCGGACTACTGGGTGGGAACAATCAAGCGTCAGGGCTCT
GTGCCCTTTGGCAACACCACCAGCAGCTATGCAATCTACCGCAACGTTAA
GGACTACGGTGCCAAGGGTGAGTCAGACCTCCTTACATGACTGGTATCTG
GCGCTGACCCAGACAGGTGACGGTTCTACCGATGATACTGATGCTATCAA
CAAGGCCATCTCCTCTGGTGGCCGCTGCGGTTCCGGTTGCGACTCGTCTA
CCACCACCCCGGCCCTGGTGTACTTCCCAGCGGGTACCTACGTGGTGTCC
AAGCCCATTGTGCAGTACTACTACACCCAGCTGGTCGGTGATGCCAACGA
CTTGCCTGTCCTCAAGGCTGCTTCGAGCTTCAGCGGCATGGCCGTCATTG
ATGCCGACCCCTACGACAGCAATGGCTCCAACTGGTACACCAACCAGAAC
AACTTCTTCCGTGCTGTCCGCAACTTTGTCATCGATCTGACGGCCATGCC
TGCATCCTCGGGCGCGGGTATTCACTGGCAGGTCGGCCAGGCCACCAGTC
TGCAGAACATTCGCTTCGAGATGGTCAAGGGTGGCAGCAACAACAAGCAG
CAGGGTATCTTCATGGACAACGGATCGGGTGGTTTTATGTCTGACCTCAC
CTTCAACGGCGGTAACTACGGTGCCTTCTTCGGTAACCAGCAGTTCACCA
CCCGCAACCTGACCTTCAACGACTGCAACACGGCCATCTACATGAACTGG
AACTGGGCCTGGACTTTCAAGTCGGTGTCGATCAACAACTGCCAGGTCGG
CTTGAACATGTCCGCATCGCCGTCCAACCAGACCGTCGGATCTGTCCTGA
TGCTAGACAGCACATTCACTAGCACTCCTACTGGTGTGGTGACTGCCTTC
AGCAGCGACAGCATTCCTACTGGTGGTGGTGCATTGGTCCTCGAAAATGT
CGACTTCTCCGGCGCTACGGTGGCCATTGCTAGTGTGAACGGCGACACCA
TTCTCAAGGGCGGCTCTGTTGTCTCGAACTACGTGCAGGGCAATGTCTAC
ACGCCGGGCAGCACCTCCAACAGCACCGTCAGCAAGCGCTCCCCTGCCGT
TGAGGCCGAGGATGTTCATGTGGTCACCCAGACCATTACCGAGACCATTA
CAGCCTGCGGTGCCGACTACGCCACTGAAACCGCTGCGGGTTCGTTCGGC
ACGGCCTCTGAGGCCGGAGCAGAGGGTTCGACCACTACCGCGGCCGGTGG
TGTGCTGCCTTTGCCATCCATGTCTGTGCAGTACCCGTCCGCCGGTAGCT
ACAGCTGGGAAGGATTTGACAGCGAAACCTCTCAGGCAACCACGGCCACC
AACGAGGCTTCTGTCCCTGCCGCCGGAACTTCTGGCGGGTCATCTCCTGC
CGTGCCCACTTCCCAGTCGGCCGGTGCCTCTGTTGTTGCCCAGGGCTCTG
GCTCTGCGTCCACTGCCTCCAGCACCTCGTCTTCCGGCTCCTACTTTGGT
ACTTCCAGCAACTCCACCGGCCAGTGCTCGACCAAGACTGTCACCAAGAC
TCGTATCGAGACCACTATTCCTTCCCAGGCCATGGCTAGCTCGCTTTTGA
CTAGCTCTGGTAGTGTGTTCGAGAAGTCCAAGCCTTTGTACGCCTCCTAT
GCCGCTTCTTCCTTCGTCAGCGTCAAGTCGGCCGGTGCCAAGGGTGACGG
TACCACCGATGACACGGCCATCATCCAGAGCGTTCTGAACAACGCGACCG
AGGACCAGATCGTGTACTTCGATCACGGTGCCTACATCATCACTGATACC
ATCAAGGTCCCCAAGAACATCAAGATCACTGGTGAGGTGTGGCCCATGCT
CATGGCGTATGGCGACAAGTTCTCCGACCAGAAGAACCCCATCCCTATGC
TCCAGGTCGGTGAAGCCGGCGAGTCTGGCTCGGTTGAGATCAGCGACCTC
GTTCTGGAGACCAAGGGACCCGCTCCTGGTGCCATCCTGGTGCAGTGGAA
CCTCCAGGCCGCTTCCCAGGGCTCTGTTGGTATGTGGGATGTCCATGCCC
GCATTGGTGGCTCTGCCGGCACTGAACTTCAGTCCGATACCTGCGCGAAG
ACCCCCAGCCAGACCACCACGGCCAACGAGAAGTGCATTGGCGCTTTCCT
CCTCTTCCACGCCACCCAGAACGCCAGCGTCTACCTGGAGAACACCTGGT
TCTGGACTGCTGACCACGACCTTGACGCGTCCGGCCACGGGCAGATTAAC
ATTTACAACGGTCGCGGTGTCCTCCTCGAGAGTGAGGGACCAGCCTGGCT
GTATGGCACGGCTGCCGAGCACAACCAGCTGTACAACTACCAGGTCTCCA
ATGCTAAGAACGTTTTCATGGGCCTGATCCAGACCGAGACTCCCTACTAC
CAGGCCAACCCCAACGCTCTGACTCCCTTCACCCCGCAGACCTCCTGGAA
TGACCCCGACTTCTCGTACTGCACCACGGACTCCTGCCGCAAGGCGTGGG
GTCTCCGTGTCATCAACAGCTCCGAGACCTACATCTACGGTGCGGGTCTC
TACAGCTTCTTCGACAACTACTCGCAGACATGTCTGGCCACGGAGTCCTG
CCAGGAGAACATTGTTGAGGTGGACTGCTCCGACGTGCACATCTACGGGC
TGAGCACCAAGGCCAGCACCAACATGATCACTTCGTCCAGCGGCGATGGC
CTTGTCCCGCAAGAGGGCAACGAGAGCACATACTGCTCGACGATCGCTTT
GTTCGAGCAGTCCTCCTCTATTTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:681690..684564+ >CAN33_37130-T1 ID=CAN33_37130-T1|Name=CAN33_37130-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5652bp|location=Sequence derived from alignment at NKJJ01000017.1:681690..684564+ (Aspergillus niger FDAARGOS_311)
ATGTTGTTTGTGTCGTACGTTTTCCTGCTGCTGAGTGTGCCAGTGGCCTT
GGTCAATGCTGTCCCTACGTCCGGCTCTGTCGATGTGACATCCCATCTGG
CGGTGCGCGCGTCGGACTACTGGGTGGGAACAATCAAGCGTCAGGGCTCT
GTGCCCTTTGGCAACACCACCAGCAGCTATGCAATCTACCGCAACGTTAA
GGACTACGGTGCCAAGGGTGACGGTTCTACCGATGATACTGATGCTATCA
ACAAGGCCATCTCCTCTGGTGGCCGCTGCGGTTCCGGTTGCGACTCGTCT
ACCACCACCCCGGCCCTGGTGTACTTCCCAGCGGGTACCTACGTGGTGTC
CAAGCCCATTGTGCAGTACTACTACACCCAGCTGGTCGGTGATGCCAACG
ACTTGCCTGTCCTCAAGGCTGCTTCGAGCTTCAGCGGCATGGCCGTCATT
GATGCCGACCCCTACGACAGCAATGGCTCCAACTGGTACACCAACCAGAA
CAACTTCTTCCGTGCTGTCCGCAACTTTGTCATCGATCTGACGGCCATGC
CTGCATCCTCGGGCGCGGGTATTCACTGGCAGGTCGGCCAGGCCACCAGT
CTGCAGAACATTCGCTTCGAGATGGTCAAGGGTGGCAGCAACAACAAGCA
GCAGGGTATCTTCATGGACAACGGATCGGGTGGTTTTATGTCTGACCTCA
CCTTCAACGGCGGTAACTACGGTGCCTTCTTCGGTAACCAGCAGTTCACC
ACCCGCAACCTGACCTTCAACGACTGCAACACGGCCATCTACATGAACTG
GAACTGGGCCTGGACTTTCAAGTCGGTGTCGATCAACAACTGCCAGGTCG
GCTTGAACATGTCCGCATCGCCGTCCAACCAGACCGTCGGATCTGTCCTG
ATGCTAGACAGCACATTCACTAGCACTCCTACTGGTGTGGTGACTGCCTT
CAGCAGCGACAGCATTCCTACTGGTGGTGGTGCATTGGTCCTCGAAAATG
TCGACTTCTCCGGCGCTACGGTGGCCATTGCTAGTGTGAACGGCGACACC
ATTCTCAAGGGCGGCTCTGTTGTCTCGAACTACGTGCAGGGCAATGTCTA
CACGCCGGGCAGCACCTCCAACAGCACCGTCAGCAAGCGCTCCCCTGCCG
TTGAGGCCGAGGATGTTCATGTGGTCACCCAGACCATTACCGAGACCATT
ACAGCCTGCGGTGCCGACTACGCCACTGAAACCGCTGCGGGTTCGTTCGG
CACGGCCTCTGAGGCCGGAGCAGAGGGTTCGACCACTACCGCGGCCGGTG
GTGTGCTGCCTTTGCCATCCATGTCTGTGCAGTACCCGTCCGCCGGTAGC
TACAGCTGGGAAGGATTTGACAGCGAAACCTCTCAGGCAACCACGGCCAC
CAACGAGGCTTCTGTCCCTGCCGCCGGAACTTCTGGCGGGTCATCTCCTG
CCGTGCCCACTTCCCAGTCGGCCGGTGCCTCTGTTGTTGCCCAGGGCTCT
GGCTCTGCGTCCACTGCCTCCAGCACCTCGTCTTCCGGCTCCTACTTTGG
TACTTCCAGCAACTCCACCGGCCAGTGCTCGACCAAGACTGTCACCAAGA
CTCGTATCGAGACCACTATTCCTTCCCAGGCCATGGCTAGCTCGCTTTTG
ACTAGCTCTGGTAGTGTGTTCGAGAAGTCCAAGCCTTTGTACGCCTCCTA
TGCCGCTTCTTCCTTCGTCAGCGTCAAGTCGGCCGGTGCCAAGGGTGACG
GTACCACCGATGACACGGCCATCATCCAGAGCGTTCTGAACAACGCGACC
GAGGACCAGATCGTGTACTTCGATCACGGTGCCTACATCATCACTGATAC
CATCAAGGTCCCCAAGAACATCAAGATCACTGGTGAGGTGTGGCCCATGC
TCATGGCGTATGGCGACAAGTTCTCCGACCAGAAGAACCCCATCCCTATG
CTCCAGGTCGGTGAAGCCGGCGAGTCTGGCTCGGTTGAGATCAGCGACCT
CGTTCTGGAGACCAAGGGACCCGCTCCTGGTGCCATCCTGGTGCAGTGGA
ACCTCCAGGCCGCTTCCCAGGGCTCTGTTGGTATGTGGGATGTCCATGCC
CGCATTGGTGGCTCTGCCGGCACTGAACTTCAGTCCGATACCTGCGCGAA
GACCCCCAGCCAGACCACCACGGCCAACGAGAAGTGCATTGGCGCTTTCC
TCCTCTTCCACGCCACCCAGAACGCCAGCGTCTACCTGGAGAACACCTGG
TTCTGGACTGCTGACCACGACCTTGACGCGTCCGGCCACGGGCAGATTAA
CATTTACAACGGTCGCGGTGTCCTCCTCGAGAGTGAGGGACCAGCCTGGC
TGTATGGCACGGCTGCCGAGCACAACCAGCTGTACAACTACCAGGTCTCC
AATGCTAAGAACGTTTTCATGGGCCTGATCCAGACCGAGACTCCCTACTA
CCAGGCCAACCCCAACGCTCTGACTCCCTTCACCCCGCAGACCTCCTGGA
ATGACCCCGACTTCTCGTACTGCACCACGGACTCCTGCCGCAAGGCGTGG
GGTCTCCGTGTCATCAACAGCTCCGAGACCTACATCTACGGTGCGGGTCT
CTACAGCTTCTTCGACAACTACTCGCAGACATGTCTGGCCACGGAGTCCT
GCCAGGAGAACATTGTTGAGGTGGACTGCTCCGACGTGCACATCTACGGG
CTGAGCACCAAGGCCAGCACCAACATGATCACTTCGTCCAGCGGCGATGG
CCTTGTCCCGCAAGAGGGCAACGAGAGCACATACTGCTCGACGATCGCTT
TGTTCGAGCAGTCCTCCTCTATTTAAATGTTGTTTGTGTCGTACGTTTTC
CTGCTGCTGAGTGTGCCAGTGGCCTTGGTCAATGCTGTCCCTACGTCCGG
CTCTGTCGATGTGACATCCCATCTGGCGGTGCGCGCGTCGGACTACTGGG
TGGGAACAATCAAGCGTCAGGGCTCTGTGCCCTTTGGCAACACCACCAGC
AGCTATGCAATCTACCGCAACGTTAAGGACTACGGTGCCAAGGGTGACGG
TTCTACCGATGATACTGATGCTATCAACAAGGCCATCTCCTCTGGTGGCC
GCTGCGGTTCCGGTTGCGACTCGTCTACCACCACCCCGGCCCTGGTGTAC
TTCCCAGCGGGTACCTACGTGGTGTCCAAGCCCATTGTGCAGTACTACTA
CACCCAGCTGGTCGGTGATGCCAACGACTTGCCTGTCCTCAAGGCTGCTT
CGAGCTTCAGCGGCATGGCCGTCATTGATGCCGACCCCTACGACAGCAAT
GGCTCCAACTGGTACACCAACCAGAACAACTTCTTCCGTGCTGTCCGCAA
CTTTGTCATCGATCTGACGGCCATGCCTGCATCCTCGGGCGCGGGTATTC
ACTGGCAGGTCGGCCAGGCCACCAGTCTGCAGAACATTCGCTTCGAGATG
GTCAAGGGTGGCAGCAACAACAAGCAGCAGGGTATCTTCATGGACAACGG
ATCGGGTGGTTTTATGTCTGACCTCACCTTCAACGGCGGTAACTACGGTG
CCTTCTTCGGTAACCAGCAGTTCACCACCCGCAACCTGACCTTCAACGAC
TGCAACACGGCCATCTACATGAACTGGAACTGGGCCTGGACTTTCAAGTC
GGTGTCGATCAACAACTGCCAGGTCGGCTTGAACATGTCCGCATCGCCGT
CCAACCAGACCGTCGGATCTGTCCTGATGCTAGACAGCACATTCACTAGC
ACTCCTACTGGTGTGGTGACTGCCTTCAGCAGCGACAGCATTCCTACTGG
TGGTGGTGCATTGGTCCTCGAAAATGTCGACTTCTCCGGCGCTACGGTGG
CCATTGCTAGTGTGAACGGCGACACCATTCTCAAGGGCGGCTCTGTTGTC
TCGAACTACGTGCAGGGCAATGTCTACACGCCGGGCAGCACCTCCAACAG
CACCGTCAGCAAGCGCTCCCCTGCCGTTGAGGCCGAGGATGTTCATGTGG
TCACCCAGACCATTACCGAGACCATTACAGCCTGCGGTGCCGACTACGCC
ACTGAAACCGCTGCGGGTTCGTTCGGCACGGCCTCTGAGGCCGGAGCAGA
GGGTTCGACCACTACCGCGGCCGGTGGTGTGCTGCCTTTGCCATCCATGT
CTGTGCAGTACCCGTCCGCCGGTAGCTACAGCTGGGAAGGATTTGACAGC
GAAACCTCTCAGGCAACCACGGCCACCAACGAGGCTTCTGTCCCTGCCGC
CGGAACTTCTGGCGGGTCATCTCCTGCCGTGCCCACTTCCCAGTCGGCCG
GTGCCTCTGTTGTTGCCCAGGGCTCTGGCTCTGCGTCCACTGCCTCCAGC
ACCTCGTCTTCCGGCTCCTACTTTGGTACTTCCAGCAACTCCACCGGCCA
GTGCTCGACCAAGACTGTCACCAAGACTCGTATCGAGACCACTATTCCTT
CCCAGGCCATGGCTAGCTCGCTTTTGACTAGCTCTGGTAGTGTGTTCGAG
AAGTCCAAGCCTTTGTACGCCTCCTATGCCGCTTCTTCCTTCGTCAGCGT
CAAGTCGGCCGGTGCCAAGGGTGACGGTACCACCGATGACACGGCCATCA
TCCAGAGCGTTCTGAACAACGCGACCGAGGACCAGATCGTGTACTTCGAT
CACGGTGCCTACATCATCACTGATACCATCAAGGTCCCCAAGAACATCAA
GATCACTGGTGAGGTGTGGCCCATGCTCATGGCGTATGGCGACAAGTTCT
CCGACCAGAAGAACCCCATCCCTATGCTCCAGGTCGGTGAAGCCGGCGAG
TCTGGCTCGGTTGAGATCAGCGACCTCGTTCTGGAGACCAAGGGACCCGC
TCCTGGTGCCATCCTGGTGCAGTGGAACCTCCAGGCCGCTTCCCAGGGCT
CTGTTGGTATGTGGGATGTCCATGCCCGCATTGGTGGCTCTGCCGGCACT
GAACTTCAGTCCGATACCTGCGCGAAGACCCCCAGCCAGACCACCACGGC
CAACGAGAAGTGCATTGGCGCTTTCCTCCTCTTCCACGCCACCCAGAACG
CCAGCGTCTACCTGGAGAACACCTGGTTCTGGACTGCTGACCACGACCTT
GACGCGTCCGGCCACGGGCAGATTAACATTTACAACGGTCGCGGTGTCCT
CCTCGAGAGTGAGGGACCAGCCTGGCTGTATGGCACGGCTGCCGAGCACA
ACCAGCTGTACAACTACCAGGTCTCCAATGCTAAGAACGTTTTCATGGGC
CTGATCCAGACCGAGACTCCCTACTACCAGGCCAACCCCAACGCTCTGAC
TCCCTTCACCCCGCAGACCTCCTGGAATGACCCCGACTTCTCGTACTGCA
CCACGGACTCCTGCCGCAAGGCGTGGGGTCTCCGTGTCATCAACAGCTCC
GAGACCTACATCTACGGTGCGGGTCTCTACAGCTTCTTCGACAACTACTC
GCAGACATGTCTGGCCACGGAGTCCTGCCAGGAGAACATTGTTGAGGTGG
ACTGCTCCGACGTGCACATCTACGGGCTGAGCACCAAGGCCAGCACCAAC
ATGATCACTTCGTCCAGCGGCGATGGCCTTGTCCCGCAAGAGGGCAACGA
GAGCACATACTGCTCGACGATCGCTTTGTTCGAGCAGTCCTCCTCTATTT
AA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
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| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:GH55 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR024535 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF12708 |
| Product | Pectate lyase superfamily protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:681690..684564 + |
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