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CAN33_38025-T1, CAN33_38025-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38025-T1
Unique NameCAN33_38025-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1216394..1218176-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38025-T1 ID=CAN33_38025-T1|Name=CAN33_38025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1783bp|location=Sequence derived from alignment at NKJJ01000017.1:1216394..1218176- (Aspergillus niger FDAARGOS_311)
ATGGCGCAGCCCCAGCAACAACACTTGACGCAGTCATTTTCCCCGCCGGT
TTCCTCACCTTCACCTGGTGCCCCATCGCCTGTAAATGGTGGTGTCCCTC
CACCTCTCAAGCGTCAACGTCTCTCACCTCTCCCTCAGTCCCAGTCCCCT
TACGCCTCACCTAGCTTCGGGACTTTACAACTGCCACAACACCAGCCCGC
TCCTATGACTACACCGACCATGAACATGAACGGCGTCCCCCAGTCTCCCG
CTCCTCCTCCACCTCCACCTCCAGGCGCGATGGGGCCTCCTTCTCGACCG
GCAGACAAGGCTACCGATGCTGCTGAGCTCACAGATGTGCTAGCATCATC
AGGAATTGATGTCCGGGAAGAGGAGGCCTACTTGACGAGCAGTTACTCTG
GTCCTCCGGTGCAGGCTCAACAACCACCTCGCCCTCAACAGCCACAGATC
CCGCAGCAACAACCTCAACAGTCGGTGCCACCTGCTGTCAACACCTCGTT
CACATCACAAGCATCGACAATTGGGAGCGTTCCTACGACTCCTAGTTTTG
AACAACCCTCCCCATATAAGCCGGCGACGACGCAGGATTCCTTCTACAGG
GAGCCGTCGACGCAGCCTCCTGCGCCTTTCAAGGATCCCAATGAGCCGAC
CCGCGAAGACACTGAGGCAGCTCGGCGCGCGCAGTATACTCTACAAGACT
CTTTCTTGTGGACTAAGGTATTGGAGCAGAGGCTGCAGAAACGTGGATTC
GAACTCGGTGTCCGTATACCGGCAGAGGGCCTGTATCATCCCGTGCCCGG
TCGCCAACAACCTATCGAAGTCACTGGACCAGATGGATCATCGATCATAC
GTTCCGGGCAAACAATCTTGAACCAAACCGGCGCACCTCTATTGGACATT
CTCAGCTTAATGTCCATCGCATGTGAAGAGCGGTTGCGAACGGTGGTCGA
TTATTCTTCAACACTGGCTCGAAGTCGACGCGCGCACTCACACGGAATTG
TCCCCACCGATTGGAAAGACGTTGCTACATCGGCTAATGCTGTCAATGGG
AATGTGGAAAATCCTAGCACACCACTTAAGCGTAGGTTTACCCCGAGATA
TTAAGAAGTGTTACAAACTAATCAATTGGCAAATAGGCCCGCTATCAGCA
ACCGAACCGCAGGGTACCAAAGCACTGTCGGAGAAGTATCGTCTACTTAT
GGACAAGGACAATTCCAGCGAAGAGGCCCGTGCTGCAAAACGTACCAGGC
GCAGCACGAATGCCATCCTTGGAGAAGGGGGAGCGAGCCGATCGGAATCC
GTGGATATCCCTGGCTCCGGCGCCTCCACACCGATCGGAGAGAGAGCCCC
TAGTATCGATAAGAAGGGAATGTCGAAGAAGGAAGCTAAGAAGCTGATGG
ATGCCAAGGCGAGCGAGGCTCAGCAACATCAGCAGTCGGTAGAGACCGCG
CGCCTGGCTACTAACAGCATGCTGTCTGGTCGCATGTTTGGAACCAAGAA
ATCTTACTCGTGGCTAAATCGTGGTGCAGCAGCTGGCAGTGGATTCTCCA
CGCCGTCCCGCGTCAACACTGCCACGCCGCCTGCGAGCACGGACAAACCC
GGACGTTCCGGTGAACCTGCCGCCGTGCCTGCAAAACGTCTGGGAACATG
GCGAGAAGACAAAGACAGAGGCGCCGGCATTCAGGTCCGGGATGTTCTGT
TTATGCTGGAGCTGGATGGCAGAGGCCCTCGACACGTACAAAAGGCCTAC
TCGAAGGATGTGAAGGAGGATCGAGCGGACTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1216394..1218176-

>CAN33_38025-T1 ID=CAN33_38025-T1|Name=CAN33_38025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3456bp|location=Sequence derived from alignment at NKJJ01000017.1:1216394..1218176- (Aspergillus niger FDAARGOS_311)
GCCCGCTATCAGCAACCGAACCGCAGGGTACCAAAGCACTGTCGGAGAAG
TATCGTCTACTTATGGACAAGGACAATTCCAGCGAAGAGGCCCGTGCTGC
AAAACGTACCAGGCGCAGCACGAATGCCATCCTTGGAGAAGGGGGAGCGA
GCCGATCGGAATCCGTGGATATCCCTGGCTCCGGCGCCTCCACACCGATC
GGAGAGAGAGCCCCTAGTATCGATAAGAAGGGAATGTCGAAGAAGGAAGC
TAAGAAGCTGATGGATGCCAAGGCGAGCGAGGCTCAGCAACATCAGCAGT
CGGTAGAGACCGCGCGCCTGGCTACTAACAGCATGCTGTCTGGTCGCATG
TTTGGAACCAAGAAATCTTACTCGTGGCTAAATCGTGGTGCAGCAGCTGG
CAGTGGATTCTCCACGCCGTCCCGCGTCAACACTGCCACGCCGCCTGCGA
GCACGGACAAACCCGGACGTTCCGGTGAACCTGCCGCCGTGCCTGCAAAA
CGTCTGGGAACATGGCGAGAAGACAAAGACAGAGGCGCCGGCATTCAGGT
CCGGGATGTTCTGTTTATGCTGGAGCTGGATGGCAGAGGCCCTCGACACG
TACAAAAGGCCTACTCGAAGGATGTGAAGGAGGATCGAGCGGACTGAATG
GCGCAGCCCCAGCAACAACACTTGACGCAGTCATTTTCCCCGCCGGTTTC
CTCACCTTCACCTGGTGCCCCATCGCCTGTAAATGGTGGTGTCCCTCCAC
CTCTCAAGCGTCAACGTCTCTCACCTCTCCCTCAGTCCCAGTCCCCTTAC
GCCTCACCTAGCTTCGGGACTTTACAACTGCCACAACACCAGCCCGCTCC
TATGACTACACCGACCATGAACATGAACGGCGTCCCCCAGTCTCCCGCTC
CTCCTCCACCTCCACCTCCAGGCGCGATGGGGCCTCCTTCTCGACCGGCA
GACAAGGCTACCGATGCTGCTGAGCTCACAGATGTGCTAGCATCATCAGG
AATTGATGTCCGGGAAGAGGAGGCCTACTTGACGAGCAGTTACTCTGGTC
CTCCGGTGCAGGCTCAACAACCACCTCGCCCTCAACAGCCACAGATCCCG
CAGCAACAACCTCAACAGTCGGTGCCACCTGCTGTCAACACCTCGTTCAC
ATCACAAGCATCGACAATTGGGAGCGTTCCTACGACTCCTAGTTTTGAAC
AACCCTCCCCATATAAGCCGGCGACGACGCAGGATTCCTTCTACAGGGAG
CCGTCGACGCAGCCTCCTGCGCCTTTCAAGGATCCCAATGAGCCGACCCG
CGAAGACACTGAGGCAGCTCGGCGCGCGCAGTATACTCTACAAGACTCTT
TCTTGTGGACTAAGGTATTGGAGCAGAGGCTGCAGAAACGTGGATTCGAA
CTCGGTGTCCGTATACCGGCAGAGGGCCTGTATCATCCCGTGCCCGGTCG
CCAACAACCTATCGAAGTCACTGGACCAGATGGATCATCGATCATACGTT
CCGGGCAAACAATCTTGAACCAAACCGGCGCACCTCTATTGGACATTCTC
AGCTTAATGTCCATCGCATGTGAAGAGCGGTTGCGAACGGTGGTCGATTA
TTCTTCAACACTGGCTCGAAGTCGACGCGCGCACTCACACGGAATTGTCC
CCACCGATTGGAAAGACGTTGCTACATCGGCTAATGCTGTCAATGGGAAT
GTGGAAAATCCTAGCACACCACTTAAGCGCCCGCTATCAGCAACCGAACC
GCAGGGTACCAAAGCACTGTCGGAGAAGTATCGTCTACTTATGGACAAGG
ACAATTCCAGCGAAGAGGCCCGTGCTGCAAAACGTACCAGGCGCAGCACG
AATGCCATCCTTGGAGAAGGGGGAGCGAGCCGATCGGAATCCGTGGATAT
CCCTGGCTCCGGCGCCTCCACACCGATCGGAGAGAGAGCCCCTAGTATCG
ATAAGAAGGGAATGTCGAAGAAGGAAGCTAAGAAGCTGATGGATGCCAAG
GCGAGCGAGGCTCAGCAACATCAGCAGTCGGTAGAGACCGCGCGCCTGGC
TACTAACAGCATGCTGTCTGGTCGCATGTTTGGAACCAAGAAATCTTACT
CGTGGCTAAATCGTGGTGCAGCAGCTGGCAGTGGATTCTCCACGCCGTCC
CGCGTCAACACTGCCACGCCGCCTGCGAGCACGGACAAACCCGGACGTTC
CGGTGAACCTGCCGCCGTGCCTGCAAAACGTCTGGGAACATGGCGAGAAG
ACAAAGACAGAGGCGCCGGCATTCAGGTCCGGGATGTTCTGTTTATGCTG
GAGCTGGATGGCAGAGGCCCTCGACACGTACAAAAGGCCTACTCGAAGGA
TGTGAAGGAGGATCGAGCGGACTGAATGGCGCAGCCCCAGCAACAACACT
TGACGCAGTCATTTTCCCCGCCGGTTTCCTCACCTTCACCTGGTGCCCCA
TCGCCTGTAAATGGTGGTGTCCCTCCACCTCTCAAGCGTCAACGTCTCTC
ACCTCTCCCTCAGTCCCAGTCCCCTTACGCCTCACCTAGCTTCGGGACTT
TACAACTGCCACAACACCAGCCCGCTCCTATGACTACACCGACCATGAAC
ATGAACGGCGTCCCCCAGTCTCCCGCTCCTCCTCCACCTCCACCTCCAGG
CGCGATGGGGCCTCCTTCTCGACCGGCAGACAAGGCTACCGATGCTGCTG
AGCTCACAGATGTGCTAGCATCATCAGGAATTGATGTCCGGGAAGAGGAG
GCCTACTTGACGAGCAGTTACTCTGGTCCTCCGGTGCAGGCTCAACAACC
ACCTCGCCCTCAACAGCCACAGATCCCGCAGCAACAACCTCAACAGTCGG
TGCCACCTGCTGTCAACACCTCGTTCACATCACAAGCATCGACAATTGGG
AGCGTTCCTACGACTCCTAGTTTTGAACAACCCTCCCCATATAAGCCGGC
GACGACGCAGGATTCCTTCTACAGGGAGCCGTCGACGCAGCCTCCTGCGC
CTTTCAAGGATCCCAATGAGCCGACCCGCGAAGACACTGAGGCAGCTCGG
CGCGCGCAGTATACTCTACAAGACTCTTTCTTGTGGACTAAGGTATTGGA
GCAGAGGCTGCAGAAACGTGGATTCGAACTCGGTGTCCGTATACCGGCAG
AGGGCCTGTATCATCCCGTGCCCGGTCGCCAACAACCTATCGAAGTCACT
GGACCAGATGGATCATCGATCATACGTTCCGGGCAAACAATCTTGAACCA
AACCGGCGCACCTCTATTGGACATTCTCAGCTTAATGTCCATCGCATGTG
AAGAGCGGTTGCGAACGGTGGTCGATTATTCTTCAACACTGGCTCGAAGT
CGACGCGCGCACTCACACGGAATTGTCCCCACCGATTGGAAAGACGTTGC
TACATCGGCTAATGCTGTCAATGGGAATGTGGAAAATCCTAGCACACCAC
TTAAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005669transcription factor TFIID complex
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38025CAN33_38025Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38025-T1CAN33_38025-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38025-T1.cdsCAN33_38025-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38025-T1.exon2CAN33_38025-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38025-T1.exon1CAN33_38025-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007900
DBxrefPFAM:PF05236
ProductTranscription initiation factor TFIID component TAF4 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1216394..1218176 -
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