|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1347962..1348843- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38275-T1 ID=CAN33_38275-T1|Name=CAN33_38275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=882bp|location=Sequence derived from alignment at NKJJ01000017.1:1347962..1348843- (Aspergillus niger FDAARGOS_311)
ATGTCTTCATACGCGATCACTGGCGCCTCCAAAGGCATCGGCCGTGAATT
CGTGCGCCAACTCGCCGCCGACTCAGCCAACAGAGTCCTGGCAGTCGTGC
GAGACCCCGAATCAGCCGAAATATCAGATCTCGTATCCAAGCACTCCAAT
GTACACATCATCAAAGGCGATGTCACGGACCCAAAATCCATTCTAGAGGC
GGCCACAGCCGCAGCCGCCATTACTGACGGCAAGCTCGACGTGCTCATCC
ACAATTCCAACGCCGTCGACAAGGCTAGCATGGCCTGTACCCCAAGCCAA
CTACCATTCGACGCTCAAGCAATTCAAGAAATATTCAACCCGTCGCTCAA
CACAGCTATCTACGGCGGTCTATGGGCGACGAACGCCTTCCTACCCTTGA
TCGAGAAGGGAGTGCAGAAGAAGATTGTGCACATCTCTAGCGGCATGGCA
GACGTAGAGCTTATCAATAAGGCTGGTATCAGTAACGCCGTTGCGTATTC
TATTGCAAAAGCGGGAATGAATGTTGTGGTTGCAAAGTACGCGGCGGAGC
TTGCGCCTAAAGGGATCAAGGTTTTGGCTTTGAGCCCGGGGTGGGTTGAT
ACATGGGAGGGTAAGTCAATTCCACTGCCCTTGACTTATTCGTTCATTGG
TCTGTAGAACAGGGATGCTAATATAGTCGGTACAACAGGTGAGAAACCCG
CTGGGGTAGTATACGCAAATGAGCTCTTGCTGAAAAAGTTCCAGCTGGTT
GAGCCTGAGCTCAGGGAGCAGATCCAGCCCGAAGAGAGTGTTAAGAAGTG
TCTCCAGGTGATTGAGCGCTTGGATGCTAAGTCTAGCGGGTTGTTCTTGA
GTCATAATGGGGATAAGTCAAGGTGGTTTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1347962..1348843- >CAN33_38275-T1 ID=CAN33_38275-T1|Name=CAN33_38275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1608bp|location=Sequence derived from alignment at NKJJ01000017.1:1347962..1348843- (Aspergillus niger FDAARGOS_311)
GTGAGAAACCCGCTGGGGTAGTATACGCAAATGAGCTCTTGCTGAAAAAG
TTCCAGCTGGTTGAGCCTGAGCTCAGGGAGCAGATCCAGCCCGAAGAGAG
TGTTAAGAAGTGTCTCCAGGTGATTGAGCGCTTGGATGCTAAGTCTAGCG
GGTTGTTCTTGAGTCATAATGGGGATAAGTCAAGGTGGTTTTGAATGTCT
TCATACGCGATCACTGGCGCCTCCAAAGGCATCGGCCGTGAATTCGTGCG
CCAACTCGCCGCCGACTCAGCCAACAGAGTCCTGGCAGTCGTGCGAGACC
CCGAATCAGCCGAAATATCAGATCTCGTATCCAAGCACTCCAATGTACAC
ATCATCAAAGGCGATGTCACGGACCCAAAATCCATTCTAGAGGCGGCCAC
AGCCGCAGCCGCCATTACTGACGGCAAGCTCGACGTGCTCATCCACAATT
CCAACGCCGTCGACAAGGCTAGCATGGCCTGTACCCCAAGCCAACTACCA
TTCGACGCTCAAGCAATTCAAGAAATATTCAACCCGTCGCTCAACACAGC
TATCTACGGCGGTCTATGGGCGACGAACGCCTTCCTACCCTTGATCGAGA
AGGGAGTGCAGAAGAAGATTGTGCACATCTCTAGCGGCATGGCAGACGTA
GAGCTTATCAATAAGGCTGGTATCAGTAACGCCGTTGCGTATTCTATTGC
AAAAGCGGGAATGAATGTTGTGGTTGCAAAGTACGCGGCGGAGCTTGCGC
CTAAAGGGATCAAGGTTTTGGCTTTGAGCCCGGGGTGGGTTGATACATGG
GAGGGTGAGAAACCCGCTGGGGTAGTATACGCAAATGAGCTCTTGCTGAA
AAAGTTCCAGCTGGTTGAGCCTGAGCTCAGGGAGCAGATCCAGCCCGAAG
AGAGTGTTAAGAAGTGTCTCCAGGTGATTGAGCGCTTGGATGCTAAGTCT
AGCGGGTTGTTCTTGAGTCATAATGGGGATAAGTCAAGGTGGTTTTGAAT
GTCTTCATACGCGATCACTGGCGCCTCCAAAGGCATCGGCCGTGAATTCG
TGCGCCAACTCGCCGCCGACTCAGCCAACAGAGTCCTGGCAGTCGTGCGA
GACCCCGAATCAGCCGAAATATCAGATCTCGTATCCAAGCACTCCAATGT
ACACATCATCAAAGGCGATGTCACGGACCCAAAATCCATTCTAGAGGCGG
CCACAGCCGCAGCCGCCATTACTGACGGCAAGCTCGACGTGCTCATCCAC
AATTCCAACGCCGTCGACAAGGCTAGCATGGCCTGTACCCCAAGCCAACT
ACCATTCGACGCTCAAGCAATTCAAGAAATATTCAACCCGTCGCTCAACA
CAGCTATCTACGGCGGTCTATGGGCGACGAACGCCTTCCTACCCTTGATC
GAGAAGGGAGTGCAGAAGAAGATTGTGCACATCTCTAGCGGCATGGCAGA
CGTAGAGCTTATCAATAAGGCTGGTATCAGTAACGCCGTTGCGTATTCTA
TTGCAAAAGCGGGAATGAATGTTGTGGTTGCAAAGTACGCGGCGGAGCTT
GCGCCTAAAGGGATCAAGGTTTTGGCTTTGAGCCCGGGGTGGGTTGATAC
ATGGGAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1347962..1348843 - |
|
