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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1381753..1382929+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38325-T1 ID=CAN33_38325-T1|Name=CAN33_38325-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1177bp|location=Sequence derived from alignment at NKJJ01000017.1:1381753..1382929+ (Aspergillus niger FDAARGOS_311)
ATGCGTCGAAGCACTACTCAATCGGAGATCCCTCTCCCTATCACCTACAC
CCCAACTACGCATCGCATCAGCAAAGCGAAGAAGGGAAAGCGTGTGCATG
CTTGCGAGTACCCGGGCTGCAACAAGGTTAGTACCATGAGAATGCTGTCG
CACAGACTTGGCAACAAGCTGACCCTTCAATTCAGGTCTTCACAAGAGCC
GAGCACCGAAGGTAAGCCACTGCGCTTGTGCCGCAATAATCTTGCCTGAT
CGGTATGCTAACTCAATCTTACAGACGCCATGAGCTGAACCACAACCCTG
AAGCCCTATTCCGGTGTACCCACAGCCACTGCAAAAAGGCATTCCACCGC
CCTGACCTTCTCGCCCGCCACATGGAAAGACAGTAAGTACTTCCTGCCAC
TACGGCTTGCTTGACTCTTTTACTGACGATTACCCTCAGCGAATTGGAAG
CACAGATGGATAGGACTGCCCAATGGCACCAGCAGAGCCGTACTCCCATC
ATCTCTGAGCCTTATGTCCCTGCCACCACGTCTATGCCCGCAACTCAAAC
ACCATACCTGGCTGTCACCCAACCGCACAATGCCATGTCGGTTGGGGCCC
TCGTGGCGCCTGCCATCCACCCAGACCTCTCCAATGACTGCGGCTTGATG
TGGAATAGTGTCGAAATTACATCTGGACACCAGACTCCTTTGTACCAAGG
CCCCCATCAGATCCACGAGTCCGTAGAAGACAGTCGGTACTACGCTACCC
CGGAAACGTGCCCGTCCCCTATCTCGGATGGCACTTCCCTCTCAGTTCAC
TCTCACTCCCGTTCGTCTGTCGTCTCCACACCGGTTACGGTCGCTGAACC
GTATCCCGAGAGCCTCATGGAACCCGACCTGACTTCCTCGCCAATGTCCA
TGCAGTCGAATATGCGCTGCTGGGAACAGCCAGACACCAGCCTCCCGTCC
CTAAGCATGATGCCTCTTCCTCTCACCGAAAGCCTCCTTCATCCGGTATG
TCAATCAGACAGAACATCCACGATAATATAATCATCGCTAACCTACCATT
GCAGTCTATCCACTGCCATTATCCATCGCCCAGCTGGTCAGCGAGCCCAA
GCCTGACCTACGAGGAACATGCCCTTCCCCCCGCCTCATACCCGCCCGCA
ATGAACTGGAAGTCGTGGGCGATATGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1381753..1382929+ >CAN33_38325-T1 ID=CAN33_38325-T1|Name=CAN33_38325-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4695bp|location=Sequence derived from alignment at NKJJ01000017.1:1381753..1382929+ (Aspergillus niger FDAARGOS_311)
ATGCGTCGAAGCACTACTCAATCGGAGATCCCTCTCCCTATCACCTACAC
CCCAACTACGCATCGCATCAGCAAAGCGAAGAAGGGAAAGCGTGTGCATG
CTTGCGAGTACCCGGGCTGCAACAAGGTCTTCACAAGAGCCGAGCACCGA
AGACGCCATGAGCTGAACCACAACCCTGAAGCCCTATTCCGGTGTACCCA
CAGCCACTGCAAAAAGGCATTCCACCGCCCTGACCTTCTCGCCCGCCACA
TGGAAAGACACGAATTGGAAGCACAGATGGATAGGACTGCCCAATGGCAC
CAGCAGAGCCGTACTCCCATCATCTCTGAGCCTTATGTCCCTGCCACCAC
GTCTATGCCCGCAACTCAAACACCATACCTGGCTGTCACCCAACCGCACA
ATGCCATGTCGGTTGGGGCCCTCGTGGCGCCTGCCATCCACCCAGACCTC
TCCAATGACTGCGGCTTGATGTGGAATAGTGTCGAAATTACATCTGGACA
CCAGACTCCTTTGTACCAAGGCCCCCATCAGATCCACGAGTCCGTAGAAG
ACAGTCGGTACTACGCTACCCCGGAAACGTGCCCGTCCCCTATCTCGGAT
GGCACTTCCCTCTCAGTTCACTCTCACTCCCGTTCGTCTGTCGTCTCCAC
ACCGGTTACGGTCGCTGAACCGTATCCCGAGAGCCTCATGGAACCCGACC
TGACTTCCTCGCCAATGTCCATGCAGTCGAATATGCGCTGCTGGGAACAG
CCAGACACCAGCCTCCCGTCCCTAAGCATGATGCCTCTTCCTCTCACCGA
AAGCCTCCTTCATCCGTCTATCCACTGCCATTATCCATCGCCCAGCTGGT
CAGCGAGCCCAAGCCTGACCTACGAGGAACATGCCCTTCCCCCCGCCTCA
TACCCGCCCGCAATGAACTGGAAGTCGTGGGCGATATGAATGCGTCGAAG
CACTACTCAATCGGAGATCCCTCTCCCTATCACCTACACCCCAACTACGC
ATCGCATCAGCAAAGCGAAGAAGGGAAAGCGTGTGCATGCTTGCGAGTAC
CCGGGCTGCAACAAGGTCTTCACAAGAGCCGAGCACCGAAGACGCCATGA
GCTGAACCACAACCCTGAAGCCCTATTCCGGTGTACCCACAGCCACTGCA
AAAAGGCATTCCACCGCCCTGACCTTCTCGCCCGCCACATGGAAAGACAC
GAATTGGAAGCACAGATGGATAGGACTGCCCAATGGCACCAGCAGAGCCG
TACTCCCATCATCTCTGAGCCTTATGTCCCTGCCACCACGTCTATGCCCG
CAACTCAAACACCATACCTGGCTGTCACCCAACCGCACAATGCCATGTCG
GTTGGGGCCCTCGTGGCGCCTGCCATCCACCCAGACCTCTCCAATGACTG
CGGCTTGATGTGGAATAGTGTCGAAATTACATCTGGACACCAGACTCCTT
TGTACCAAGGCCCCCATCAGATCCACGAGTCCGTAGAAGACAGTCGGTAC
TACGCTACCCCGGAAACGTGCCCGTCCCCTATCTCGGATGGCACTTCCCT
CTCAGTTCACTCTCACTCCCGTTCGTCTGTCGTCTCCACACCGGTTACGG
TCGCTGAACCGTATCCCGAGAGCCTCATGGAACCCGACCTGACTTCCTCG
CCAATGTCCATGCAGTCGAATATGCGCTGCTGGGAACAGCCAGACACCAG
CCTCCCGTCCCTAAGCATGATGCCTCTTCCTCTCACCGAAAGCCTCCTTC
ATCCGTCTATCCACTGCCATTATCCATCGCCCAGCTGGTCAGCGAGCCCA
AGCCTGACCTACGAGGAACATGCCCTTCCCCCCGCCTCATACCCGCCCGC
AATGAACTGGAAGTCGTGGGCGATATGAATGCGTCGAAGCACTACTCAAT
CGGAGATCCCTCTCCCTATCACCTACACCCCAACTACGCATCGCATCAGC
AAAGCGAAGAAGGGAAAGCGTGTGCATGCTTGCGAGTACCCGGGCTGCAA
CAAGGTCTTCACAAGAGCCGAGCACCGAAGACGCCATGAGCTGAACCACA
ACCCTGAAGCCCTATTCCGGTGTACCCACAGCCACTGCAAAAAGGCATTC
CACCGCCCTGACCTTCTCGCCCGCCACATGGAAAGACACGAATTGGAAGC
ACAGATGGATAGGACTGCCCAATGGCACCAGCAGAGCCGTACTCCCATCA
TCTCTGAGCCTTATGTCCCTGCCACCACGTCTATGCCCGCAACTCAAACA
CCATACCTGGCTGTCACCCAACCGCACAATGCCATGTCGGTTGGGGCCCT
CGTGGCGCCTGCCATCCACCCAGACCTCTCCAATGACTGCGGCTTGATGT
GGAATAGTGTCGAAATTACATCTGGACACCAGACTCCTTTGTACCAAGGC
CCCCATCAGATCCACGAGTCCGTAGAAGACAGTCGGTACTACGCTACCCC
GGAAACGTGCCCGTCCCCTATCTCGGATGGCACTTCCCTCTCAGTTCACT
CTCACTCCCGTTCGTCTGTCGTCTCCACACCGGTTACGGTCGCTGAACCG
TATCCCGAGAGCCTCATGGAACCCGACCTGACTTCCTCGCCAATGTCCAT
GCAGTCGAATATGCGCTGCTGGGAACAGCCAGACACCAGCCTCCCGTCCC
TAAGCATGATGCCTCTTCCTCTCACCGAAAGCCTCCTTCATCCGTCTATC
CACTGCCATTATCCATCGCCCAGCTGGTCAGCGAGCCCAAGCCTGACCTA
CGAGGAACATGCCCTTCCCCCCGCCTCATACCCGCCCGCAATGAACTGGA
AGTCGTGGGCGATATGAATGCGTCGAAGCACTACTCAATCGGAGATCCCT
CTCCCTATCACCTACACCCCAACTACGCATCGCATCAGCAAAGCGAAGAA
GGGAAAGCGTGTGCATGCTTGCGAGTACCCGGGCTGCAACAAGGTCTTCA
CAAGAGCCGAGCACCGAAGACGCCATGAGCTGAACCACAACCCTGAAGCC
CTATTCCGGTGTACCCACAGCCACTGCAAAAAGGCATTCCACCGCCCTGA
CCTTCTCGCCCGCCACATGGAAAGACACGAATTGGAAGCACAGATGGATA
GGACTGCCCAATGGCACCAGCAGAGCCGTACTCCCATCATCTCTGAGCCT
TATGTCCCTGCCACCACGTCTATGCCCGCAACTCAAACACCATACCTGGC
TGTCACCCAACCGCACAATGCCATGTCGGTTGGGGCCCTCGTGGCGCCTG
CCATCCACCCAGACCTCTCCAATGACTGCGGCTTGATGTGGAATAGTGTC
GAAATTACATCTGGACACCAGACTCCTTTGTACCAAGGCCCCCATCAGAT
CCACGAGTCCGTAGAAGACAGTCGGTACTACGCTACCCCGGAAACGTGCC
CGTCCCCTATCTCGGATGGCACTTCCCTCTCAGTTCACTCTCACTCCCGT
TCGTCTGTCGTCTCCACACCGGTTACGGTCGCTGAACCGTATCCCGAGAG
CCTCATGGAACCCGACCTGACTTCCTCGCCAATGTCCATGCAGTCGAATA
TGCGCTGCTGGGAACAGCCAGACACCAGCCTCCCGTCCCTAAGCATGATG
CCTCTTCCTCTCACCGAAAGCCTCCTTCATCCGTCTATCCACTGCCATTA
TCCATCGCCCAGCTGGTCAGCGAGCCCAAGCCTGACCTACGAGGAACATG
CCCTTCCCCCCGCCTCATACCCGCCCGCAATGAACTGGAAGTCGTGGGCG
ATATGAATGCGTCGAAGCACTACTCAATCGGAGATCCCTCTCCCTATCAC
CTACACCCCAACTACGCATCGCATCAGCAAAGCGAAGAAGGGAAAGCGTG
TGCATGCTTGCGAGTACCCGGGCTGCAACAAGGTCTTCACAAGAGCCGAG
CACCGAAGACGCCATGAGCTGAACCACAACCCTGAAGCCCTATTCCGGTG
TACCCACAGCCACTGCAAAAAGGCATTCCACCGCCCTGACCTTCTCGCCC
GCCACATGGAAAGACACGAATTGGAAGCACAGATGGATAGGACTGCCCAA
TGGCACCAGCAGAGCCGTACTCCCATCATCTCTGAGCCTTATGTCCCTGC
CACCACGTCTATGCCCGCAACTCAAACACCATACCTGGCTGTCACCCAAC
CGCACAATGCCATGTCGGTTGGGGCCCTCGTGGCGCCTGCCATCCACCCA
GACCTCTCCAATGACTGCGGCTTGATGTGGAATAGTGTCGAAATTACATC
TGGACACCAGACTCCTTTGTACCAAGGCCCCCATCAGATCCACGAGTCCG
TAGAAGACAGTCGGTACTACGCTACCCCGGAAACGTGCCCGTCCCCTATC
TCGGATGGCACTTCCCTCTCAGTTCACTCTCACTCCCGTTCGTCTGTCGT
CTCCACACCGGTTACGGTCGCTGAACCGTATCCCGAGAGCCTCATGGAAC
CCGACCTGACTTCCTCGCCAATGTCCATGCAGTCGAATATGCGCTGCTGG
GAACAGCCAGACACCAGCCTCCCGTCCCTAAGCATGATGCCTCTTCCTCT
CACCGAAAGCCTCCTTCATCCGTCTATCCACTGCCATTATCCATCGCCCA
GCTGGTCAGCGAGCCCAAGCCTGACCTACGAGGAACATGCCCTTCCCCCC
GCCTCATACCCGCCCGCAATGAACTGGAAGTCGTGGGCGATATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| Product | C2H2-type zinc finger family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1381753..1382929 + |
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