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CAN33_38400-T1, CAN33_38400-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38400-T1
Unique NameCAN33_38400-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1426657..1428674-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38400-T1 ID=CAN33_38400-T1|Name=CAN33_38400-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2018bp|location=Sequence derived from alignment at NKJJ01000017.1:1426657..1428674- (Aspergillus niger FDAARGOS_311)
ATGACCACCTCTGCCTACTACGTTACGCCCCCACCGGTCGGGATAGGTTG
CCTTCGCCATCATGAGCGGCCAGGTTGATGCGCTCTATATCTATGATGAG
CAGAGGCACGCAGTTCCCTCCAATGTTCTGACTACCAGCAGTCACTGACC
TGTCCTCTTCCAGCAATCCGATCGTCGAGCAGGTCTATCGCTCCCGTCCG
CCCTCCGCATCGGCCATTCTTCCCCTCTATAATGCCTATGCAGCTCCGCG
CCCATCACTCATCTACTTTCCAAATACAACTCCGCCGGTGACAGTGTTTT
CGGTAGTGCAGTCCAACCTACTGTTTTTGGCGCTGTCCGAGGTTGACACG
GAACCGCTGCTTGCCCTGGAATTCATTCATCGGGTTGTTGATGTTCTCGA
GGACTTCGTCGGGGCACCTTTGCTTTCCACCAAGATCCAGGCGAATTATG
ATGTGGTTGCACAGCTTCTGCACGAAATGTGCGATGCGGGGATTGTCTGC
AATACAGAGCCCAATGCGCTACAGGAGGTAGTGGAAATGCCGGGGTGGAT
GGGGAAGCTGTTAGGCGGCGTTGGATTGCCTGGGTGAGTGCCCACCGTTA
CGGGATGGAGGTCACCATACTATTTACAGTGAACTGACGGCCTTCGTTAT
GCGCAGGTCATCCACACCGATTCTGGGACAACCCAGTGCCATGAAGCAAT
CAGCCGCCGCCGCGACCCAAGGACCTGCGATCCCCTGGAGAAAGTCCGGA
GTAAGACACACTTCCAACGAGCTATATGTTGATATTATTGAGTCACTTTC
CGTGACGATGGCGCCATCAGGACGACTGCTCTCTGCAATGTCTTCCGGTA
CTATCGCCTTCACCGCCAAAATATCCGGTGTACCCGATCTGCTTCTTTCG
TTAACAGCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGCTGGAGCTGCC
GGTATTTCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAGCACCCTGGCG
AGCTCAGTTTTGTACCACCAGACGGTCGGTTCATTCTTGCCGGATACGAG
GTGGACCTCATGCCAACAGACCCTACACTTGATCAACCCCCGAGTCATAT
GGAGAAGCTTTTCTTGCCGGCTATTGTGGACATCCGTAAATCGCTTGGGC
CGACTGGCTCAGACTTCGAGGTCCGCCTTATTCTCAACACAAACTTCCCG
GGATACTCATCCTCTAACCGACCTGGGGTCGGGCGTAGCGGATCAGGCAC
GTCTACACCCTCTTTCCTCGGGGTGGAGGCGGCAACTCCTCGGCGCCAGT
GCTAGAAGAGGTTGTGGTGAGCGTCCCGATCCCGAAGTCGGTCCGGAACA
TCACAGACATGCAAGCCAGCCGAGGAGAGGCTTTATTCTCACCGGGCAAC
GGCGTATTAGAATGGCGCGTGCCGACTAAAGATGCCGGCACAATCTCCGG
AACGGCGACACTCCGGTGCACCGTCGTAGGACACTACGCGGATGACGAGC
TGGACGACGACGTCGAAGAACTCGACGCAGACACCAACCTCCTGCAGGGC
TACTACGACGCCAGCGCGTCTTACCAGAACCCTGAAGCAGACACGACGAA
ACGCAAGACTAAGAAAAAGAAGAAGAAGAAGGTTGTCAAGAAATCTTCTT
CCCGCGCAGCGGCAGCGGCAGCGGCAGCAGAAGCAGAAGCCTCAGCTTCC
TCGCCCGCTGAACACCTTTCCTTGAACCCCGAGGATCCCGAACAACTCGA
ACATACGCCTACTCCTGAACCCGAACAATCCCAGACGCTAACACCCCCGT
TCAATCATCTTCGCCGCAACCTCCACCGTCACTTCCCCGGTCACAGTCAC
AGTCGCAGAAACAATCACCCAGCCGAGCTTACTCTGATTCCTCCATCTTC
CTTTCGGCGCCCCGTAAAACCAAGACCCAACTAAACGCGACACTTATGCC
TAATTCGGCGGCTGTGTCGTTCTCTGTCCGTGGCTGGCTTCCCTCGGGGC
TCAAGGTAGAGAGCCTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1426657..1428674-

>CAN33_38400-T1 ID=CAN33_38400-T1|Name=CAN33_38400-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6825bp|location=Sequence derived from alignment at NKJJ01000017.1:1426657..1428674- (Aspergillus niger FDAARGOS_311)
AGCCTGACGGATCAGGCACGTCTACACCCTCTTTCCTCGGGGTGGAGGCG
GCAACTCCTCGGCGCCAGTGCTAGAAGAGGTTGTGGTGAGCGTCCCGATC
CCGAAGTCGGTCCGGAACATCACAGACATGCAAGCCAGCCGAGGAGAGGC
TTTATTCTCACCGGGCAACGGCGTATTAGAATGGCGCGTGCCGACTAAAG
ATGCCGGCACAATCTCCGGAACGGCGACACTCCGGTGCACCGTCGTAGGA
CACTACGCGGATGACGAGCTGGACGACGACGTCGAAGAACTCGACGCAGA
CACCAACCTCCTGCAGGGCTACTACGACGCCAGCGCGTCATCCACACCGA
TTCTGGGACAACCCAGTGCCATGAAGCAATCAGCCGCCGCCGCGACCCAA
GGACCTGCGATCCCCTGGAGAAAGTCCGGAGTAAGACACACTTCCAACGA
GCTATATGTTGATATTATTGAGTCACTTTCCGTGACGATGGCGCCATCAG
GACGACTGCTCTCTGCAATGTCTTCCGGTACTATCGCCTTCACCGCCAAA
ATATCCGGTGTACCCGATCTGCTTCTTTCGTTAACAGCGCCCGGTGGTCA
GAAAGCCTTGGGACGCAAGCTGGAGCTGCCGGTATTTCACCCATGTGTGC
GCTTGGCGCGCTGGCGGGAGCACCCTGGCGAGCTCAGTTTTGTACCACCA
GACGGTCGGTTCATTCTTGCCGGATACGAGGTGGACCTCATGCCAACAGA
CCCTACACTTGATCAACCCCCGAGTCATATGGAGAAGCTTTTCTTGCCGG
CTATTGTGGACATCCGTAAATCGCTTGGGCCGACTGGCTCAGACTTCGAG
TCACTGACCTGTCCTCTTCCAGCAATCCGATCGTCGAGCAGGTCTATCGC
TCCCGTCCGCCCTCCGCATCGGCCATTCTTCCCCTCTATAATGCCTATGC
AGCTCCGCGCCCATCACTCATCTACTTTCCAAATACAACTCCGCCGGTGA
CAGTGTTTTCGGTAGTGCAGTCCAACCTACTGTTTTTGGCGCTGTCCGAG
GTTGACACGGAACCGCTGCTTGCCCTGGAATTCATTCATCGGGTTGTTGA
TGTTCTCGAGGACTTCGTCGGGGCACCTTTGCTTTCCACCAAGATCCAGG
CGAATTATGATGTGGTTGCACAGCTTCTGCACGAAATGTGCGATGCGGGG
ATTGTCTGCAATACAGAGCCCAATGCGCTACAGGAGGTAGTGGAAATGCC
GGGGTGGATGGGGAAGCTGTTAGGCGGCGTTGGATTGCCTGGATGACCAC
CTCTGCCTACTACGTTACGCCCCCACCGGTCGGGATAGGTTGCCTTCGCC
ATCATGAGCGGCCAGAGCCTGACGGATCAGGCACGTCTACACCCTCTTTC
CTCGGGGTGGAGGCGGCAACTCCTCGGCGCCAGTGCTAGAAGAGGTTGTG
GTGAGCGTCCCGATCCCGAAGTCGGTCCGGAACATCACAGACATGCAAGC
CAGCCGAGGAGAGGCTTTATTCTCACCGGGCAACGGCGTATTAGAATGGC
GCGTGCCGACTAAAGATGCCGGCACAATCTCCGGAACGGCGACACTCCGG
TGCACCGTCGTAGGACACTACGCGGATGACGAGCTGGACGACGACGTCGA
AGAACTCGACGCAGACACCAACCTCCTGCAGGGCTACTACGACGCCAGCG
CGTCATCCACACCGATTCTGGGACAACCCAGTGCCATGAAGCAATCAGCC
GCCGCCGCGACCCAAGGACCTGCGATCCCCTGGAGAAAGTCCGGAGTAAG
ACACACTTCCAACGAGCTATATGTTGATATTATTGAGTCACTTTCCGTGA
CGATGGCGCCATCAGGACGACTGCTCTCTGCAATGTCTTCCGGTACTATC
GCCTTCACCGCCAAAATATCCGGTGTACCCGATCTGCTTCTTTCGTTAAC
AGCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGCTGGAGCTGCCGGTAT
TTCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAGCACCCTGGCGAGCTC
AGTTTTGTACCACCAGACGGTCGGTTCATTCTTGCCGGATACGAGGTGGA
CCTCATGCCAACAGACCCTACACTTGATCAACCCCCGAGTCATATGGAGA
AGCTTTTCTTGCCGGCTATTGTGGACATCCGTAAATCGCTTGGGCCGACT
GGCTCAGACTTCGAGTCACTGACCTGTCCTCTTCCAGCAATCCGATCGTC
GAGCAGGTCTATCGCTCCCGTCCGCCCTCCGCATCGGCCATTCTTCCCCT
CTATAATGCCTATGCAGCTCCGCGCCCATCACTCATCTACTTTCCAAATA
CAACTCCGCCGGTGACAGTGTTTTCGGTAGTGCAGTCCAACCTACTGTTT
TTGGCGCTGTCCGAGGTTGACACGGAACCGCTGCTTGCCCTGGAATTCAT
TCATCGGGTTGTTGATGTTCTCGAGGACTTCGTCGGGGCACCTTTGCTTT
CCACCAAGATCCAGGCGAATTATGATGTGGTTGCACAGCTTCTGCACGAA
ATGTGCGATGCGGGGATTGTCTGCAATACAGAGCCCAATGCGCTACAGGA
GGTAGTGGAAATGCCGGGGTGGATGGGGAAGCTGTTAGGCGGCGTTGGAT
TGCCTGGATGACCACCTCTGCCTACTACGTTACGCCCCCACCGGTCGGGA
TAGGTTGCCTTCGCCATCATGAGCGGCCAGAGCCTGACGGATCAGGCACG
TCTACACCCTCTTTCCTCGGGGTGGAGGCGGCAACTCCTCGGCGCCAGTG
CTAGAAGAGGTTGTGGTGAGCGTCCCGATCCCGAAGTCGGTCCGGAACAT
CACAGACATGCAAGCCAGCCGAGGAGAGGCTTTATTCTCACCGGGCAACG
GCGTATTAGAATGGCGCGTGCCGACTAAAGATGCCGGCACAATCTCCGGA
ACGGCGACACTCCGGTGCACCGTCGTAGGACACTACGCGGATGACGAGCT
GGACGACGACGTCGAAGAACTCGACGCAGACACCAACCTCCTGCAGGGCT
ACTACGACGCCAGCGCGTCATCCACACCGATTCTGGGACAACCCAGTGCC
ATGAAGCAATCAGCCGCCGCCGCGACCCAAGGACCTGCGATCCCCTGGAG
AAAGTCCGGAGTAAGACACACTTCCAACGAGCTATATGTTGATATTATTG
AGTCACTTTCCGTGACGATGGCGCCATCAGGACGACTGCTCTCTGCAATG
TCTTCCGGTACTATCGCCTTCACCGCCAAAATATCCGGTGTACCCGATCT
GCTTCTTTCGTTAACAGCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGC
TGGAGCTGCCGGTATTTCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAG
CACCCTGGCGAGCTCAGTTTTGTACCACCAGACGGTCGGTTCATTCTTGC
CGGATACGAGGTGGACCTCATGCCAACAGACCCTACACTTGATCAACCCC
CGAGTCATATGGAGAAGCTTTTCTTGCCGGCTATTGTGGACATCCGTAAA
TCGCTTGGGCCGACTGGCTCAGACTTCGAGTCACTGACCTGTCCTCTTCC
AGCAATCCGATCGTCGAGCAGGTCTATCGCTCCCGTCCGCCCTCCGCATC
GGCCATTCTTCCCCTCTATAATGCCTATGCAGCTCCGCGCCCATCACTCA
TCTACTTTCCAAATACAACTCCGCCGGTGACAGTGTTTTCGGTAGTGCAG
TCCAACCTACTGTTTTTGGCGCTGTCCGAGGTTGACACGGAACCGCTGCT
TGCCCTGGAATTCATTCATCGGGTTGTTGATGTTCTCGAGGACTTCGTCG
GGGCACCTTTGCTTTCCACCAAGATCCAGGCGAATTATGATGTGGTTGCA
CAGCTTCTGCACGAAATGTGCGATGCGGGGATTGTCTGCAATACAGAGCC
CAATGCGCTACAGGAGGTAGTGGAAATGCCGGGGTGGATGGGGAAGCTGT
TAGGCGGCGTTGGATTGCCTGGATGACCACCTCTGCCTACTACGTTACGC
CCCCACCGGTCGGGATAGGTTGCCTTCGCCATCATGAGCGGCCAGAGCCT
GACGGATCAGGCACGTCTACACCCTCTTTCCTCGGGGTGGAGGCGGCAAC
TCCTCGGCGCCAGTGCTAGAAGAGGTTGTGGTGAGCGTCCCGATCCCGAA
GTCGGTCCGGAACATCACAGACATGCAAGCCAGCCGAGGAGAGGCTTTAT
TCTCACCGGGCAACGGCGTATTAGAATGGCGCGTGCCGACTAAAGATGCC
GGCACAATCTCCGGAACGGCGACACTCCGGTGCACCGTCGTAGGACACTA
CGCGGATGACGAGCTGGACGACGACGTCGAAGAACTCGACGCAGACACCA
ACCTCCTGCAGGGCTACTACGACGCCAGCGCGTCATCCACACCGATTCTG
GGACAACCCAGTGCCATGAAGCAATCAGCCGCCGCCGCGACCCAAGGACC
TGCGATCCCCTGGAGAAAGTCCGGAGTAAGACACACTTCCAACGAGCTAT
ATGTTGATATTATTGAGTCACTTTCCGTGACGATGGCGCCATCAGGACGA
CTGCTCTCTGCAATGTCTTCCGGTACTATCGCCTTCACCGCCAAAATATC
CGGTGTACCCGATCTGCTTCTTTCGTTAACAGCGCCCGGTGGTCAGAAAG
CCTTGGGACGCAAGCTGGAGCTGCCGGTATTTCACCCATGTGTGCGCTTG
GCGCGCTGGCGGGAGCACCCTGGCGAGCTCAGTTTTGTACCACCAGACGG
TCGGTTCATTCTTGCCGGATACGAGGTGGACCTCATGCCAACAGACCCTA
CACTTGATCAACCCCCGAGTCATATGGAGAAGCTTTTCTTGCCGGCTATT
GTGGACATCCGTAAATCGCTTGGGCCGACTGGCTCAGACTTCGAGTCACT
GACCTGTCCTCTTCCAGCAATCCGATCGTCGAGCAGGTCTATCGCTCCCG
TCCGCCCTCCGCATCGGCCATTCTTCCCCTCTATAATGCCTATGCAGCTC
CGCGCCCATCACTCATCTACTTTCCAAATACAACTCCGCCGGTGACAGTG
TTTTCGGTAGTGCAGTCCAACCTACTGTTTTTGGCGCTGTCCGAGGTTGA
CACGGAACCGCTGCTTGCCCTGGAATTCATTCATCGGGTTGTTGATGTTC
TCGAGGACTTCGTCGGGGCACCTTTGCTTTCCACCAAGATCCAGGCGAAT
TATGATGTGGTTGCACAGCTTCTGCACGAAATGTGCGATGCGGGGATTGT
CTGCAATACAGAGCCCAATGCGCTACAGGAGGTAGTGGAAATGCCGGGGT
GGATGGGGAAGCTGTTAGGCGGCGTTGGATTGCCTGGATGACCACCTCTG
CCTACTACGTTACGCCCCCACCGGTCGGGATAGGTTGCCTTCGCCATCAT
GAGCGGCCAGAGCCTGACGGATCAGGCACGTCTACACCCTCTTTCCTCGG
GGTGGAGGCGGCAACTCCTCGGCGCCAGTGCTAGAAGAGGTTGTGGTGAG
CGTCCCGATCCCGAAGTCGGTCCGGAACATCACAGACATGCAAGCCAGCC
GAGGAGAGGCTTTATTCTCACCGGGCAACGGCGTATTAGAATGGCGCGTG
CCGACTAAAGATGCCGGCACAATCTCCGGAACGGCGACACTCCGGTGCAC
CGTCGTAGGACACTACGCGGATGACGAGCTGGACGACGACGTCGAAGAAC
TCGACGCAGACACCAACCTCCTGCAGGGCTACTACGACGCCAGCGCGTCA
TCCACACCGATTCTGGGACAACCCAGTGCCATGAAGCAATCAGCCGCCGC
CGCGACCCAAGGACCTGCGATCCCCTGGAGAAAGTCCGGAGTAAGACACA
CTTCCAACGAGCTATATGTTGATATTATTGAGTCACTTTCCGTGACGATG
GCGCCATCAGGACGACTGCTCTCTGCAATGTCTTCCGGTACTATCGCCTT
CACCGCCAAAATATCCGGTGTACCCGATCTGCTTCTTTCGTTAACAGCGC
CCGGTGGTCAGAAAGCCTTGGGACGCAAGCTGGAGCTGCCGGTATTTCAC
CCATGTGTGCGCTTGGCGCGCTGGCGGGAGCACCCTGGCGAGCTCAGTTT
TGTACCACCAGACGGTCGGTTCATTCTTGCCGGATACGAGGTGGACCTCA
TGCCAACAGACCCTACACTTGATCAACCCCCGAGTCATATGGAGAAGCTT
TTCTTGCCGGCTATTGTGGACATCCGTAAATCGCTTGGGCCGACTGGCTC
AGACTTCGAGTCACTGACCTGTCCTCTTCCAGCAATCCGATCGTCGAGCA
GGTCTATCGCTCCCGTCCGCCCTCCGCATCGGCCATTCTTCCCCTCTATA
ATGCCTATGCAGCTCCGCGCCCATCACTCATCTACTTTCCAAATACAACT
CCGCCGGTGACAGTGTTTTCGGTAGTGCAGTCCAACCTACTGTTTTTGGC
GCTGTCCGAGGTTGACACGGAACCGCTGCTTGCCCTGGAATTCATTCATC
GGGTTGTTGATGTTCTCGAGGACTTCGTCGGGGCACCTTTGCTTTCCACC
AAGATCCAGGCGAATTATGATGTGGTTGCACAGCTTCTGCACGAAATGTG
CGATGCGGGGATTGTCTGCAATACAGAGCCCAATGCGCTACAGGAGGTAG
TGGAAATGCCGGGGTGGATGGGGAAGCTGTTAGGCGGCGTTGGATTGCCT
GGATGACCACCTCTGCCTACTACGTTACGCCCCCACCGGTCGGGATAGGT
TGCCTTCGCCATCATGAGCGGCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38400CAN33_38400Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38400-T1CAN33_38400-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38400-T1.cdsCAN33_38400-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38400-T1.exon5CAN33_38400-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_38400-T1.exon4CAN33_38400-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_38400-T1.exon3CAN33_38400-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_38400-T1.exon2CAN33_38400-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38400-T1.exon1CAN33_38400-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036168
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR018240
DBxrefInterPro:IPR028565
DBxrefPFAM:PF00928
ProductAdaptor complexes medium subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1426657..1428674 -
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