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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1502892..1504700- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38520-T1 ID=CAN33_38520-T1|Name=CAN33_38520-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1809bp|location=Sequence derived from alignment at NKJJ01000017.1:1502892..1504700- (Aspergillus niger FDAARGOS_311)
ATGGCCTCCGTCACTTCGCTTGACAAGGACTTGCGCAGTCTGCGCTTGTC
CCGCTATACCCCGCAGGCAGCTGCGGAAGTCCGCGACTGGATTGAAGAAG
TGTTACACGAAAAACTCCAGCCAGGAGATCTCCTGGATGCTTTGAAAGAT
GGCGTTGCACTCTGCAGGTGAGATGAGGACTATTCTGTGTCGATCTGGGG
GCGTTCATGGACACTAACAATGTTGCAGGCTAGTCAACTTGGCCGTCTCC
CCCGGCGTCAAGTACAAGCAGTCCTCGATGCCCTTCGTGCAGATGGAGAA
CATCTCTCACTTCCTTCGCGCATGCCAAATGCAGCCCATCAGCCTCCCTC
CGCACGATGTTTTCCTGACCGTCGATCTCTACGAAGCCAAGGACCCCGCA
CAGGTCCTACAATGTCTCACATCTTTCAGCCGCCGGGCCAATGCTCTCCA
GCCTAGCAAGTTCCCTCGCGCACTCGGCCCTCAAAGCAAGGCAGCCACTC
TGAGCCCGCATGCCACCGGTTCCAGCCAAGGCGCTTACACCCCCACCAAA
TCGAGTGTATCCGGACACTCCAGCCCAGCACGATCCCCGAAGCCAGTCAG
CAGCTGGAGCAAGAAATCGGATGAGTTTGCCACGGCCCCGGCCTGGAACA
TTCACCAGTACGGCTACATGGGCGGTGCCAACCAGGGCAACCAGGGCGTT
GCCTTTGGTGCTCGTCGGCAGATCACTACCGCTGCCCCGCGTGTTCCCAG
CCTGGCGGAGAAAGAAAAGCGGAGAAAGGAGGAAGAAGAACGGCAGCTTC
TGGAGAAGCAGGAAGCGGAGCGCCAGCGCCAGCAGGAACGCGAAGCTGAA
GAGGAACGTGCACGCATCGAGGAAGAGCGCCGCTGGGAGGAGGAAACGAA
CCGTTTGAGGGAGAAAGAACGGCGTCAAGTCGAAGAGGAGCGCAAGCGCT
GGGACGCGCAACAGCGCAAATGGGAAGAAGAGGAGCGGCAACGCCAGCGC
GAAGAAAAGGAAACGGAGGATAGGCTAGAGCGCGAGCGACTGCAACGGCG
AGAGGCGCAAGACAGCCGTCTCAACGGACAGTTCCTCAGCCAATACCAAG
CCAGTCTACCAACAGCATCTCCCGTTCCCCCAGTCTCCAGCGAAAACCGC
GAGAGACAACGCATCCGCGAACTCGAGCGCGAGCTAGAACGCGCCAAGGA
GAGAGAACGCCAATACGAGCGCGAACGTCAAGACATCCAAGAACGGGCAA
CCAAATCGCCGCCTCGCAGCCCCCGCCCAGCCCAGCCCAGCTACGACCTG
TCCTCCCTCGAGCAAGAACGTCGCATGCTCCGGACCGAATGGCAAAAGCA
CCACGACGAGCCACTCGCAGAATCAGACATTCCCCCAAGCATGCCTCCCC
GACCCCTCCCTGAGCCCGTCATCGCCGCCGGGGACAAACCACCTACGCCC
CCTCGCCCCTTGCCCGACCCCACCGAAGCGAAGCCCCCTATGCCTCCACG
ACCCCTCCCCGATCCCACAAGCTACACCTCTCCACCCCAAAGCCCCTACA
CACAAGAGAGCCGTGTCGACCGATTCCTCGCATCCAACCGGCCCCCTGTT
GCCCCGAAGCCCGTTGCCCACCGGCCCCAAGACTACACAACCACTGCGGA
AGTAGACGCCGAAAATAGCCGTCGCGCCGCCGCCCAAGAGAAGACCAAGG
CCGGCGGCTGGGCCTCCAAGTCCCTCCTGGAGCGCGAGATGGAGCGCGAA
CGGGAACGTCAGCGCGAGTGGGAGGAGAATCAGCTTCAGACACAGGAGGC
AGCAGCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1502892..1504700- >CAN33_38520-T1 ID=CAN33_38520-T1|Name=CAN33_38520-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6132bp|location=Sequence derived from alignment at NKJJ01000017.1:1502892..1504700- (Aspergillus niger FDAARGOS_311)
CTAGGAAGAGCGCCGCTGGGAGGAGGAAACGAACCGTTTGAGGGAGAAAG
AACGGCGTCAAGTCGAAGAGGAGCGCAAGCGCTGGGACGCGCAACAGCGC
AAATGGGAAGAAGAGGAGCGGCAACGCCAGCGCGAAGAAAAGGAAACGGA
GGATAGGCTAGAGCGCGAGCGACTGCAACGGCGAGAGGCGCAAGACAGCC
GTCTCAACGGACAGTTCCTCAGCCAATACCAAGCCAGTCTACCAACAGCA
TCTCCCGTTCCCCCAGTCTCCAGCGAAAACCGCGAGAGACAACGCATCCG
CGAACTCGAGCGCGAGCTAGAACGCGCCAAGGAGAGAGAACGCCAATACG
AGCGCGAACGTCAAGACATCCAAGAACGGGCAACCAAATCGCCGCCTCGC
AGCCCCCGCCCAGCCCAGCCCAGCTACGACCTGTCCTCCCTCGAGCAAGA
ACGTCGCATGCTCCGGACCGAATGGCAAAAGCACCACGACGAGCCACTCG
CAGAATCAGACATTCCCCCAAGCATGCCTCCCCGACCCCTCCCTGAGCCC
GTCATCGCCGCCGGGGACAAACCACCTACGCCCCCTCGCCCCTTGCCCGA
CCCCACCGAAGCGAAGCCCCCTATGCCTCCACGACCCCTCCCCGATCCCA
CAAGCTACACCTCTCCACCCCAAAGCCCCTACACACAAGAGAGCCGTGTC
GACCGATTCCTCGCATCCAACCGGCCCCCTGTTGCCCCGAAGCCCGTTGC
CCACCGGCCCCAAGACTACACAACCACTGCGGAAGTAGACGCCGAAAATA
GCCGTCGCGCCGCCGCCCAAGAGAAGACCAAGGCCGGCGGCTGGGCCTCC
AAGCTAGTCAACTTGGCCGTCTCCCCCGGCGTCAAGTACAAGCAGTCCTC
GATGCCCTTCGTGCAGATGGAGAACATCTCTCACTTCCTTCGCGCATGCC
AAATGCAGCCCATCAGCCTCCCTCCGCACGATGTTTTCCTGACCGTCGAT
CTCTACGAAGCCAAGGACCCCGCACAGGTCCTACAATGTCTCACATCTTT
CAGCCGCCGGGCCAATGCTCTCCAGCCTAGCAAGTTCCCTCGCGCACTCG
GCCCTCAAAGCAAGGCAGCCACTCTGAGCCCGCATGCCACCGGTTCCAGC
CAAGGCGCTTACACCCCCACCAAATCGAGTGTATCCGGACACTCCAGCCC
AGCACGATCCCCGAAGCCAGTCAGCAGCTGGAGCAAGAAATCGGATGAGT
TTGCCACGGCCCCGGCCTGGAACATTCACCAGTACGGCTACATGGGCGGT
GCCAACCAGGGCAACCAGGGCGTTGCCTTTGGTGCTCGTCGGCAGATCAC
TACCGCTGCCCCGCGTATGGCCTCCGTCACTTCGCTTGACAAGGACTTGC
GCAGTCTGCGCTTGTCCCGCTATACCCCGCAGGCAGCTGCGGAAGTCCGC
GACTGGATTGAAGAAGTGTTACACGAAAAACTCCAGCCAGGAGATCTCCT
GGATGCTTTGAAAGATGGCGTTGCACTCTGCAGCTAGGAAGAGCGCCGCT
GGGAGGAGGAAACGAACCGTTTGAGGGAGAAAGAACGGCGTCAAGTCGAA
GAGGAGCGCAAGCGCTGGGACGCGCAACAGCGCAAATGGGAAGAAGAGGA
GCGGCAACGCCAGCGCGAAGAAAAGGAAACGGAGGATAGGCTAGAGCGCG
AGCGACTGCAACGGCGAGAGGCGCAAGACAGCCGTCTCAACGGACAGTTC
CTCAGCCAATACCAAGCCAGTCTACCAACAGCATCTCCCGTTCCCCCAGT
CTCCAGCGAAAACCGCGAGAGACAACGCATCCGCGAACTCGAGCGCGAGC
TAGAACGCGCCAAGGAGAGAGAACGCCAATACGAGCGCGAACGTCAAGAC
ATCCAAGAACGGGCAACCAAATCGCCGCCTCGCAGCCCCCGCCCAGCCCA
GCCCAGCTACGACCTGTCCTCCCTCGAGCAAGAACGTCGCATGCTCCGGA
CCGAATGGCAAAAGCACCACGACGAGCCACTCGCAGAATCAGACATTCCC
CCAAGCATGCCTCCCCGACCCCTCCCTGAGCCCGTCATCGCCGCCGGGGA
CAAACCACCTACGCCCCCTCGCCCCTTGCCCGACCCCACCGAAGCGAAGC
CCCCTATGCCTCCACGACCCCTCCCCGATCCCACAAGCTACACCTCTCCA
CCCCAAAGCCCCTACACACAAGAGAGCCGTGTCGACCGATTCCTCGCATC
CAACCGGCCCCCTGTTGCCCCGAAGCCCGTTGCCCACCGGCCCCAAGACT
ACACAACCACTGCGGAAGTAGACGCCGAAAATAGCCGTCGCGCCGCCGCC
CAAGAGAAGACCAAGGCCGGCGGCTGGGCCTCCAAGCTAGTCAACTTGGC
CGTCTCCCCCGGCGTCAAGTACAAGCAGTCCTCGATGCCCTTCGTGCAGA
TGGAGAACATCTCTCACTTCCTTCGCGCATGCCAAATGCAGCCCATCAGC
CTCCCTCCGCACGATGTTTTCCTGACCGTCGATCTCTACGAAGCCAAGGA
CCCCGCACAGGTCCTACAATGTCTCACATCTTTCAGCCGCCGGGCCAATG
CTCTCCAGCCTAGCAAGTTCCCTCGCGCACTCGGCCCTCAAAGCAAGGCA
GCCACTCTGAGCCCGCATGCCACCGGTTCCAGCCAAGGCGCTTACACCCC
CACCAAATCGAGTGTATCCGGACACTCCAGCCCAGCACGATCCCCGAAGC
CAGTCAGCAGCTGGAGCAAGAAATCGGATGAGTTTGCCACGGCCCCGGCC
TGGAACATTCACCAGTACGGCTACATGGGCGGTGCCAACCAGGGCAACCA
GGGCGTTGCCTTTGGTGCTCGTCGGCAGATCACTACCGCTGCCCCGCGTA
TGGCCTCCGTCACTTCGCTTGACAAGGACTTGCGCAGTCTGCGCTTGTCC
CGCTATACCCCGCAGGCAGCTGCGGAAGTCCGCGACTGGATTGAAGAAGT
GTTACACGAAAAACTCCAGCCAGGAGATCTCCTGGATGCTTTGAAAGATG
GCGTTGCACTCTGCAGCTAGGAAGAGCGCCGCTGGGAGGAGGAAACGAAC
CGTTTGAGGGAGAAAGAACGGCGTCAAGTCGAAGAGGAGCGCAAGCGCTG
GGACGCGCAACAGCGCAAATGGGAAGAAGAGGAGCGGCAACGCCAGCGCG
AAGAAAAGGAAACGGAGGATAGGCTAGAGCGCGAGCGACTGCAACGGCGA
GAGGCGCAAGACAGCCGTCTCAACGGACAGTTCCTCAGCCAATACCAAGC
CAGTCTACCAACAGCATCTCCCGTTCCCCCAGTCTCCAGCGAAAACCGCG
AGAGACAACGCATCCGCGAACTCGAGCGCGAGCTAGAACGCGCCAAGGAG
AGAGAACGCCAATACGAGCGCGAACGTCAAGACATCCAAGAACGGGCAAC
CAAATCGCCGCCTCGCAGCCCCCGCCCAGCCCAGCCCAGCTACGACCTGT
CCTCCCTCGAGCAAGAACGTCGCATGCTCCGGACCGAATGGCAAAAGCAC
CACGACGAGCCACTCGCAGAATCAGACATTCCCCCAAGCATGCCTCCCCG
ACCCCTCCCTGAGCCCGTCATCGCCGCCGGGGACAAACCACCTACGCCCC
CTCGCCCCTTGCCCGACCCCACCGAAGCGAAGCCCCCTATGCCTCCACGA
CCCCTCCCCGATCCCACAAGCTACACCTCTCCACCCCAAAGCCCCTACAC
ACAAGAGAGCCGTGTCGACCGATTCCTCGCATCCAACCGGCCCCCTGTTG
CCCCGAAGCCCGTTGCCCACCGGCCCCAAGACTACACAACCACTGCGGAA
GTAGACGCCGAAAATAGCCGTCGCGCCGCCGCCCAAGAGAAGACCAAGGC
CGGCGGCTGGGCCTCCAAGCTAGTCAACTTGGCCGTCTCCCCCGGCGTCA
AGTACAAGCAGTCCTCGATGCCCTTCGTGCAGATGGAGAACATCTCTCAC
TTCCTTCGCGCATGCCAAATGCAGCCCATCAGCCTCCCTCCGCACGATGT
TTTCCTGACCGTCGATCTCTACGAAGCCAAGGACCCCGCACAGGTCCTAC
AATGTCTCACATCTTTCAGCCGCCGGGCCAATGCTCTCCAGCCTAGCAAG
TTCCCTCGCGCACTCGGCCCTCAAAGCAAGGCAGCCACTCTGAGCCCGCA
TGCCACCGGTTCCAGCCAAGGCGCTTACACCCCCACCAAATCGAGTGTAT
CCGGACACTCCAGCCCAGCACGATCCCCGAAGCCAGTCAGCAGCTGGAGC
AAGAAATCGGATGAGTTTGCCACGGCCCCGGCCTGGAACATTCACCAGTA
CGGCTACATGGGCGGTGCCAACCAGGGCAACCAGGGCGTTGCCTTTGGTG
CTCGTCGGCAGATCACTACCGCTGCCCCGCGTATGGCCTCCGTCACTTCG
CTTGACAAGGACTTGCGCAGTCTGCGCTTGTCCCGCTATACCCCGCAGGC
AGCTGCGGAAGTCCGCGACTGGATTGAAGAAGTGTTACACGAAAAACTCC
AGCCAGGAGATCTCCTGGATGCTTTGAAAGATGGCGTTGCACTCTGCAGC
TAGGAAGAGCGCCGCTGGGAGGAGGAAACGAACCGTTTGAGGGAGAAAGA
ACGGCGTCAAGTCGAAGAGGAGCGCAAGCGCTGGGACGCGCAACAGCGCA
AATGGGAAGAAGAGGAGCGGCAACGCCAGCGCGAAGAAAAGGAAACGGAG
GATAGGCTAGAGCGCGAGCGACTGCAACGGCGAGAGGCGCAAGACAGCCG
TCTCAACGGACAGTTCCTCAGCCAATACCAAGCCAGTCTACCAACAGCAT
CTCCCGTTCCCCCAGTCTCCAGCGAAAACCGCGAGAGACAACGCATCCGC
GAACTCGAGCGCGAGCTAGAACGCGCCAAGGAGAGAGAACGCCAATACGA
GCGCGAACGTCAAGACATCCAAGAACGGGCAACCAAATCGCCGCCTCGCA
GCCCCCGCCCAGCCCAGCCCAGCTACGACCTGTCCTCCCTCGAGCAAGAA
CGTCGCATGCTCCGGACCGAATGGCAAAAGCACCACGACGAGCCACTCGC
AGAATCAGACATTCCCCCAAGCATGCCTCCCCGACCCCTCCCTGAGCCCG
TCATCGCCGCCGGGGACAAACCACCTACGCCCCCTCGCCCCTTGCCCGAC
CCCACCGAAGCGAAGCCCCCTATGCCTCCACGACCCCTCCCCGATCCCAC
AAGCTACACCTCTCCACCCCAAAGCCCCTACACACAAGAGAGCCGTGTCG
ACCGATTCCTCGCATCCAACCGGCCCCCTGTTGCCCCGAAGCCCGTTGCC
CACCGGCCCCAAGACTACACAACCACTGCGGAAGTAGACGCCGAAAATAG
CCGTCGCGCCGCCGCCCAAGAGAAGACCAAGGCCGGCGGCTGGGCCTCCA
AGCTAGTCAACTTGGCCGTCTCCCCCGGCGTCAAGTACAAGCAGTCCTCG
ATGCCCTTCGTGCAGATGGAGAACATCTCTCACTTCCTTCGCGCATGCCA
AATGCAGCCCATCAGCCTCCCTCCGCACGATGTTTTCCTGACCGTCGATC
TCTACGAAGCCAAGGACCCCGCACAGGTCCTACAATGTCTCACATCTTTC
AGCCGCCGGGCCAATGCTCTCCAGCCTAGCAAGTTCCCTCGCGCACTCGG
CCCTCAAAGCAAGGCAGCCACTCTGAGCCCGCATGCCACCGGTTCCAGCC
AAGGCGCTTACACCCCCACCAAATCGAGTGTATCCGGACACTCCAGCCCA
GCACGATCCCCGAAGCCAGTCAGCAGCTGGAGCAAGAAATCGGATGAGTT
TGCCACGGCCCCGGCCTGGAACATTCACCAGTACGGCTACATGGGCGGTG
CCAACCAGGGCAACCAGGGCGTTGCCTTTGGTGCTCGTCGGCAGATCACT
ACCGCTGCCCCGCGTATGGCCTCCGTCACTTCGCTTGACAAGGACTTGCG
CAGTCTGCGCTTGTCCCGCTATACCCCGCAGGCAGCTGCGGAAGTCCGCG
ACTGGATTGAAGAAGTGTTACACGAAAAACTCCAGCCAGGAGATCTCCTG
GATGCTTTGAAAGATGGCGTTGCACTCTGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036872 |
| DBxref | InterPro:IPR001715 |
| DBxref | PFAM:PF00307 |
| Product | Calponin homology (CH) domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1502892..1504700 - |
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