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CAN33_38550-T1, CAN33_38550-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38550-T1
Unique NameCAN33_38550-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1524989..1525964+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38550-T1 ID=CAN33_38550-T1|Name=CAN33_38550-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=976bp|location=Sequence derived from alignment at NKJJ01000017.1:1524989..1525964+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCACCCAGACTCATCAACCGCTTCATGCGGCCATCGACCTCGCC
GATCTCTCTGACGACAACTTTTGCCCGTCGCTCCTTCGGCAGCTCGGTTG
TTCGTCAAAACAGCGTGAACAACAATGATCGCGCACCATCCACGGCCCCT
GAGCATCGCAAGAACCAGACAAACAAGCCCCCTAACCCCCATGTGCCCAA
CACGACCTCCACCATGACCAAGGACTTCCCCAAGGTCGGCGAGAAGCCGG
CTCCCCCCGAGATGTTGAACTCGGTCGACCCCAACTACCGGCCGGCGGAT
CCTTACCCCGGGAGAGTCGAGCATTTCACCGGAGGTCGCCAGGAGACGGG
GGCTCAGAAGCCTGAACTTGGTGTTGGAGAGATGGAGGGAATTACTTTCA
AGGTTGAGCCACTGCGCCGGGAGGGTGAAGATGTCACTACTATGAGGGCT
CGGCTGTTGTGTTCGTGATCCCCGGTTCACGTCTTCCTGGTTGAATGAAT
GGCTAATGCAGTTGGGGAATTGTATAGATCAAAGCCGCAAGCGCGGAATC
CTCGAGTCTGATCTCCTGTTGTCTACGTTCGCCGATGTATATCTGGCCGA
TATGAACAAGGAGCAGTTGCAGGAGTATGACCGGTTCTTGGATGAGAATG
ACTGGGATATTTACTACTGGGCCACGCAGGACCCTCCAGCTGAGGGCAAT
GAAGCTGCTGTGTCCACTGAGGCAGGTGCCCAGGATACTCCCACGGAGAC
GTGGAAGCGTACTGGAGCCAAGAGCGGCGAGTGGGCGCAGACGGTTGGTG
CTTTCAAGGCTGCATACCGGCCCGTTCCGTCACGATGGGCCGACTCCGAT
GTGCTGCGACTCCTGCGTCAACATGTTCGGGATAACAGTGCCACGGGATT
CCATGCTGCGAAGACTAAGAAGACTGGTGGGCCTGGACTGGGACGTATGC
CCAATGTGCAGGTGTTCAACAACTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1524989..1525964+

>CAN33_38550-T1 ID=CAN33_38550-T1|Name=CAN33_38550-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1818bp|location=Sequence derived from alignment at NKJJ01000017.1:1524989..1525964+ (Aspergillus niger FDAARGOS_311)
ATGTCCGCACCCAGACTCATCAACCGCTTCATGCGGCCATCGACCTCGCC
GATCTCTCTGACGACAACTTTTGCCCGTCGCTCCTTCGGCAGCTCGGTTG
TTCGTCAAAACAGCGTGAACAACAATGATCGCGCACCATCCACGGCCCCT
GAGCATCGCAAGAACCAGACAAACAAGCCCCCTAACCCCCATGTGCCCAA
CACGACCTCCACCATGACCAAGGACTTCCCCAAGGTCGGCGAGAAGCCGG
CTCCCCCCGAGATGTTGAACTCGGTCGACCCCAACTACCGGCCGGCGGAT
CCTTACCCCGGGAGAGTCGAGCATTTCACCGGAGGTCGCCAGGAGACGGG
GGCTCAGAAGCCTGAACTTGGTGTTGGAGAGATGGAGGGAATTACTTTCA
AGGTTGAGCCACTGCGCCGGGAGGGTGAAGATGTCACTACTATGAGGGCT
CGGCTGTTGTATCAAAGCCGCAAGCGCGGAATCCTCGAGTCTGATCTCCT
GTTGTCTACGTTCGCCGATGTATATCTGGCCGATATGAACAAGGAGCAGT
TGCAGGAGTATGACCGGTTCTTGGATGAGAATGACTGGGATATTTACTAC
TGGGCCACGCAGGACCCTCCAGCTGAGGGCAATGAAGCTGCTGTGTCCAC
TGAGGCAGGTGCCCAGGATACTCCCACGGAGACGTGGAAGCGTACTGGAG
CCAAGAGCGGCGAGTGGGCGCAGACGGTTGGTGCTTTCAAGGCTGCATAC
CGGCCCGTTCCGTCACGATGGGCCGACTCCGATGTGCTGCGACTCCTGCG
TCAACATGTTCGGGATAACAGTGCCACGGGATTCCATGCTGCGAAGACTA
AGAAGACTGGTGGGCCTGGACTGGGACGTATGCCCAATGTGCAGGTGTTC
AACAACTGAATGTCCGCACCCAGACTCATCAACCGCTTCATGCGGCCATC
GACCTCGCCGATCTCTCTGACGACAACTTTTGCCCGTCGCTCCTTCGGCA
GCTCGGTTGTTCGTCAAAACAGCGTGAACAACAATGATCGCGCACCATCC
ACGGCCCCTGAGCATCGCAAGAACCAGACAAACAAGCCCCCTAACCCCCA
TGTGCCCAACACGACCTCCACCATGACCAAGGACTTCCCCAAGGTCGGCG
AGAAGCCGGCTCCCCCCGAGATGTTGAACTCGGTCGACCCCAACTACCGG
CCGGCGGATCCTTACCCCGGGAGAGTCGAGCATTTCACCGGAGGTCGCCA
GGAGACGGGGGCTCAGAAGCCTGAACTTGGTGTTGGAGAGATGGAGGGAA
TTACTTTCAAGGTTGAGCCACTGCGCCGGGAGGGTGAAGATGTCACTACT
ATGAGGGCTCGGCTGTTGTATCAAAGCCGCAAGCGCGGAATCCTCGAGTC
TGATCTCCTGTTGTCTACGTTCGCCGATGTATATCTGGCCGATATGAACA
AGGAGCAGTTGCAGGAGTATGACCGGTTCTTGGATGAGAATGACTGGGAT
ATTTACTACTGGGCCACGCAGGACCCTCCAGCTGAGGGCAATGAAGCTGC
TGTGTCCACTGAGGCAGGTGCCCAGGATACTCCCACGGAGACGTGGAAGC
GTACTGGAGCCAAGAGCGGCGAGTGGGCGCAGACGGTTGGTGCTTTCAAG
GCTGCATACCGGCCCGTTCCGTCACGATGGGCCGACTCCGATGTGCTGCG
ACTCCTGCGTCAACATGTTCGGGATAACAGTGCCACGGGATTCCATGCTG
CGAAGACTAAGAAGACTGGTGGGCCTGGACTGGGACGTATGCCCAATGTG
CAGGTGTTCAACAACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0018293protein-FAD linkage
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_38550CAN33_38550Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38550-T1.exon1CAN33_38550-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_38550-T1.exon2CAN33_38550-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38550-T1.cdsCAN33_38550-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38550-T1CAN33_38550-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR028882
DBxrefInterPro:IPR005631
DBxrefInterPro:IPR036714
DBxrefPFAM:PF03937
ProductFlavinator of succinate dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1524989..1525964 +
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