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CAN33_38725-T1, CAN33_38725-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_38725-T1
Unique NameCAN33_38725-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:1632063..1633701-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_38725-T1 ID=CAN33_38725-T1|Name=CAN33_38725-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1639bp|location=Sequence derived from alignment at NKJJ01000017.1:1632063..1633701- (Aspergillus niger FDAARGOS_311)
ATGCCCAAAGAAAAGGAATCCAAGCTCTCCTTCAACCTCAAAACCCCCAA
GGGTACCAAGGACTGGTCCGGCTCCGACGCCCTCCTCCGCGACCGCATCT
TCTCCACCATCGCCGATGTCTTCAAGCGCCATGGCGGTACTGCCCTCGAC
ACCCCCGTCTTCGAGCTGCGCGAGATTCTCGCCGGTAAGTATGGCGAGGA
CTCCAAGCTCATTTACGACCTTCAAGACCAGGGTGGAGAAATCTGCTCTC
TCCGCTACGATCTCACCGTCCCCTTCGCCCGCTGGCTCGCCATGAACCCG
GATGTCCGCAGCATGAAGCGCTACCACATCGCCAAGGTGTACCGTCGCGA
TCAGCCCGCCGTGAGCAAGGGTCGCATGCGCGAGTTCTACCAGTGCGATT
TCGATATCGCCGGTACCTTCGATCCCATGGTCCCCGATGCCGAGATCCTG
CGCATCGTCACCGAAGTCTTCGAGGAGCTGGGCTGGAACGGCCGCTATAA
CATCAAGATCAACCACCGGAAGATTCTGGACGGTGTGTTCCAGGTCTGCG
GTGTGCCCGAGGAGAAGATCCGTCCCATCTCCAGTGCCGTCGACAAGCTG
GACAAGATGCCCTGGGCGGACGTGCGCAAGGAAATGGTCGAGGAGAAGGG
CCTGGACGGCGCCGTGGCTGACAAGATCGAGACATACGTGATGCACAAGG
GCGGTCGCGAACTCCTTGATAACCTCCTCAAGGATGAGGGCCTGACTGCC
AACGAGTCTGCCAAGGCCGGTCTGGAAGATATGGGCCTGCTTATGGATTA
CCTCGAGGCATTCGGTGTGCTGGACAAGATCTCCTTCGACATGAGCTTGG
CCCGCGGTCTCGATTATTACACCGGTGTGATCTATGAGGTCGTTACCGAG
GGCTCCGCCCCCGCCGTGGCGTCCTCCGCACCGGAGGCCCAGGCCGTGCA
GAAGTCCGGCAAGAAGAGCAAGTCCAAGGGCGGCAATCTGGAGGATGACG
ACCGCTCCAACGACCCGACCCTGGGTGTCGGCAGTGTCGCCGCAGGAGGT
CGCTATGACAACCTGGTGGGCATGTTCCTGCCCAAGGCGCAGATTCCCTG
TGTGGGTGTGTCCTTCGGTGTGGACCGTATCTTCTCCATCACCAAGGCCC
GTCTCGAGCGGGAGAAGAGCGCTGAAGCCCTCCGCAGCAGCGAGGTCGAT
GCCTACGTGATGGCCTTTGGCGGTAAGGGCTTCACGGGTATGTTGAAGGA
GCGGATGAGCGTGTGCCAGACTCTCTGGAACTCTGGCGTCAAGGTAAGCT
CCCCCACCCCCACCTACCATCTTTCCTCCCCTCCTGCTATATACTAATAA
TCCATAGGCCGAATTCTCCTACAAAGTCAAGCCCAAGCTCCCCCAACAAT
TCAAGGCCGCCGAACAAGCCGGCGTCCCCTTCGCCGTCATCCTGGGCGAG
GACGAGCTCGCGGCCGGCAAGGTTCGCGTCAAGGAAATGGGTCTGGAGGA
CGGACACCCCGAGAAGGAAGGTGTGCTGGTTGATCTGACTGCTCTGCCGG
CGGAGGTCAAGGCCCGGGTGGCTAAGAAGCGAGGAGAGAGTGTCGATGGT
GTTGCGCAGCAGTTGGGTGAGATGAAGGTTGATGCATAG
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Coding sequence (CDS) from alignment at NKJJ01000017.1:1632063..1633701-

>CAN33_38725-T1 ID=CAN33_38725-T1|Name=CAN33_38725-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3150bp|location=Sequence derived from alignment at NKJJ01000017.1:1632063..1633701- (Aspergillus niger FDAARGOS_311)
GCCGAATTCTCCTACAAAGTCAAGCCCAAGCTCCCCCAACAATTCAAGGC
CGCCGAACAAGCCGGCGTCCCCTTCGCCGTCATCCTGGGCGAGGACGAGC
TCGCGGCCGGCAAGGTTCGCGTCAAGGAAATGGGTCTGGAGGACGGACAC
CCCGAGAAGGAAGGTGTGCTGGTTGATCTGACTGCTCTGCCGGCGGAGGT
CAAGGCCCGGGTGGCTAAGAAGCGAGGAGAGAGTGTCGATGGTGTTGCGC
AGCAGTTGGGTGAGATGAAGGTTGATGCATAGATGCCCAAAGAAAAGGAA
TCCAAGCTCTCCTTCAACCTCAAAACCCCCAAGGGTACCAAGGACTGGTC
CGGCTCCGACGCCCTCCTCCGCGACCGCATCTTCTCCACCATCGCCGATG
TCTTCAAGCGCCATGGCGGTACTGCCCTCGACACCCCCGTCTTCGAGCTG
CGCGAGATTCTCGCCGGTAAGTATGGCGAGGACTCCAAGCTCATTTACGA
CCTTCAAGACCAGGGTGGAGAAATCTGCTCTCTCCGCTACGATCTCACCG
TCCCCTTCGCCCGCTGGCTCGCCATGAACCCGGATGTCCGCAGCATGAAG
CGCTACCACATCGCCAAGGTGTACCGTCGCGATCAGCCCGCCGTGAGCAA
GGGTCGCATGCGCGAGTTCTACCAGTGCGATTTCGATATCGCCGGTACCT
TCGATCCCATGGTCCCCGATGCCGAGATCCTGCGCATCGTCACCGAAGTC
TTCGAGGAGCTGGGCTGGAACGGCCGCTATAACATCAAGATCAACCACCG
GAAGATTCTGGACGGTGTGTTCCAGGTCTGCGGTGTGCCCGAGGAGAAGA
TCCGTCCCATCTCCAGTGCCGTCGACAAGCTGGACAAGATGCCCTGGGCG
GACGTGCGCAAGGAAATGGTCGAGGAGAAGGGCCTGGACGGCGCCGTGGC
TGACAAGATCGAGACATACGTGATGCACAAGGGCGGTCGCGAACTCCTTG
ATAACCTCCTCAAGGATGAGGGCCTGACTGCCAACGAGTCTGCCAAGGCC
GGTCTGGAAGATATGGGCCTGCTTATGGATTACCTCGAGGCATTCGGTGT
GCTGGACAAGATCTCCTTCGACATGAGCTTGGCCCGCGGTCTCGATTATT
ACACCGGTGTGATCTATGAGGTCGTTACCGAGGGCTCCGCCCCCGCCGTG
GCGTCCTCCGCACCGGAGGCCCAGGCCGTGCAGAAGTCCGGCAAGAAGAG
CAAGTCCAAGGGCGGCAATCTGGAGGATGACGACCGCTCCAACGACCCGA
CCCTGGGTGTCGGCAGTGTCGCCGCAGGAGGTCGCTATGACAACCTGGTG
GGCATGTTCCTGCCCAAGGCGCAGATTCCCTGTGTGGGTGTGTCCTTCGG
TGTGGACCGTATCTTCTCCATCACCAAGGCCCGTCTCGAGCGGGAGAAGA
GCGCTGAAGCCCTCCGCAGCAGCGAGGTCGATGCCTACGTGATGGCCTTT
GGCGGTAAGGGCTTCACGGGTATGTTGAAGGAGCGGATGAGCGTGTGCCA
GACTCTCTGGAACTCTGGCGTCAAGGCCGAATTCTCCTACAAAGTCAAGC
CCAAGCTCCCCCAACAATTCAAGGCCGCCGAACAAGCCGGCGTCCCCTTC
GCCGTCATCCTGGGCGAGGACGAGCTCGCGGCCGGCAAGGTTCGCGTCAA
GGAAATGGGTCTGGAGGACGGACACCCCGAGAAGGAAGGTGTGCTGGTTG
ATCTGACTGCTCTGCCGGCGGAGGTCAAGGCCCGGGTGGCTAAGAAGCGA
GGAGAGAGTGTCGATGGTGTTGCGCAGCAGTTGGGTGAGATGAAGGTTGA
TGCATAGATGCCCAAAGAAAAGGAATCCAAGCTCTCCTTCAACCTCAAAA
CCCCCAAGGGTACCAAGGACTGGTCCGGCTCCGACGCCCTCCTCCGCGAC
CGCATCTTCTCCACCATCGCCGATGTCTTCAAGCGCCATGGCGGTACTGC
CCTCGACACCCCCGTCTTCGAGCTGCGCGAGATTCTCGCCGGTAAGTATG
GCGAGGACTCCAAGCTCATTTACGACCTTCAAGACCAGGGTGGAGAAATC
TGCTCTCTCCGCTACGATCTCACCGTCCCCTTCGCCCGCTGGCTCGCCAT
GAACCCGGATGTCCGCAGCATGAAGCGCTACCACATCGCCAAGGTGTACC
GTCGCGATCAGCCCGCCGTGAGCAAGGGTCGCATGCGCGAGTTCTACCAG
TGCGATTTCGATATCGCCGGTACCTTCGATCCCATGGTCCCCGATGCCGA
GATCCTGCGCATCGTCACCGAAGTCTTCGAGGAGCTGGGCTGGAACGGCC
GCTATAACATCAAGATCAACCACCGGAAGATTCTGGACGGTGTGTTCCAG
GTCTGCGGTGTGCCCGAGGAGAAGATCCGTCCCATCTCCAGTGCCGTCGA
CAAGCTGGACAAGATGCCCTGGGCGGACGTGCGCAAGGAAATGGTCGAGG
AGAAGGGCCTGGACGGCGCCGTGGCTGACAAGATCGAGACATACGTGATG
CACAAGGGCGGTCGCGAACTCCTTGATAACCTCCTCAAGGATGAGGGCCT
GACTGCCAACGAGTCTGCCAAGGCCGGTCTGGAAGATATGGGCCTGCTTA
TGGATTACCTCGAGGCATTCGGTGTGCTGGACAAGATCTCCTTCGACATG
AGCTTGGCCCGCGGTCTCGATTATTACACCGGTGTGATCTATGAGGTCGT
TACCGAGGGCTCCGCCCCCGCCGTGGCGTCCTCCGCACCGGAGGCCCAGG
CCGTGCAGAAGTCCGGCAAGAAGAGCAAGTCCAAGGGCGGCAATCTGGAG
GATGACGACCGCTCCAACGACCCGACCCTGGGTGTCGGCAGTGTCGCCGC
AGGAGGTCGCTATGACAACCTGGTGGGCATGTTCCTGCCCAAGGCGCAGA
TTCCCTGTGTGGGTGTGTCCTTCGGTGTGGACCGTATCTTCTCCATCACC
AAGGCCCGTCTCGAGCGGGAGAAGAGCGCTGAAGCCCTCCGCAGCAGCGA
GGTCGATGCCTACGTGATGGCCTTTGGCGGTAAGGGCTTCACGGGTATGT
TGAAGGAGCGGATGAGCGTGTGCCAGACTCTCTGGAACTCTGGCGTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006427histidyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004821histidine-tRNA ligase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTS1CAN33_38725Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38725-T1CAN33_38725-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38725-T1.cdsCAN33_38725-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_38725-T1.exon2CAN33_38725-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_38725-T1.exon1CAN33_38725-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR033656
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR015807
DBxrefInterPro:IPR036621
DBxrefInterPro:IPR004516
DBxrefInterPro:IPR004154
DBxrefInterPro:IPR041715
DBxrefPFAM:PF13393
DBxrefPFAM:PF03129
ProductCytoplasmic and mitochondrial histidine tRNA synthetase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:1632063..1633701 -
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