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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:1736775..1737790- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_38900-T1 ID=CAN33_38900-T1|Name=CAN33_38900-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1016bp|location=Sequence derived from alignment at NKJJ01000017.1:1736775..1737790- (Aspergillus niger FDAARGOS_311)
ATGGCGCTATTATTTCTGAAGCAGAAGCTCTTCCCGAGCGAAAAGCAAAA
ACAGGCCCTTCCATATGGTCTGTCCGCCTGCAAATGAATAACTTCAACCG
AACTCGACTGACCAAAACAGGCAAACCACTACTTTCCAATGAAGATACCG
ATACCCTGCCGAGCGAACAAGATCTCGAAGCTCAGCGGTCTTACTCTACC
TTCCGCGCCTCATCTCCCGTTTCCGACACCGACAGCACCGCCGCCAGCAC
TAGCAGTTCGCGATCACGTATCAACCCGCGTATTGTATCGGATGCCATTC
TAGGTTTATCCGATGGCTTGACGGTACCTTTCGCGCTGAGCGCTGGTCTC
TCGGCGCTGGGTAACACTAAGGTCGTTGTGCTTGGTGGATTGGCTGAATT
GACGGCGGGTGCCATCTCCATGGGCCTGGGAGGATATGTCGGTGCGAAGA
GTGAAGCGTAAGTTTTCCTTTTCAAATAATTCATCCGTTCAATTCTAACA
GCAAATAGTGAATCGTACGAGACCACCGTTCGTGAGGCAAAAGAACTCAT
CGACACATCGCCAGCCGAAACCAGTTCCATTGTCCAATCCATCTTCGCTT
CCTACCGTCTCCCCGAAGATGTCATCAACCAGATTAACATGTCCCTCCAC
TCCTCTGAAGACCGCCTCCTCGACTTCCTGGTCAGCTTTCATCACAAGGA
ATCCGAGCCTGACTGCAACCAGGCGTGGATCTCCGCCATCACACTCGCCC
TTGGCTACTTCGTCGGTGGTTTCATCCCGCTCATCCCATACTTCATCGTC
GACCAGGTGATAGTGGCATTGTACATGAGCATCGGAGTCATGGCAATCAC
GCTTCTGGCCTTCGGATACATCAAGACATGTGTAGTGCGCGGCTGGTCCG
GGCGCGACAACGTCGTCGCAGGCATCAAGGGAGGAATACAAATGTGTTTC
GTGGGCGGAGTCGCAGCTGGAGCAGCCATTGCCTTGGTCCGGTTGATCGA
CACCGGCGGAGCGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:1736775..1737790- >CAN33_38900-T1 ID=CAN33_38900-T1|Name=CAN33_38900-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2736bp|location=Sequence derived from alignment at NKJJ01000017.1:1736775..1737790- (Aspergillus niger FDAARGOS_311)
TGAATCGTACGAGACCACCGTTCGTGAGGCAAAAGAACTCATCGACACAT
CGCCAGCCGAAACCAGTTCCATTGTCCAATCCATCTTCGCTTCCTACCGT
CTCCCCGAAGATGTCATCAACCAGATTAACATGTCCCTCCACTCCTCTGA
AGACCGCCTCCTCGACTTCCTGGTCAGCTTTCATCACAAGGAATCCGAGC
CTGACTGCAACCAGGCGTGGATCTCCGCCATCACACTCGCCCTTGGCTAC
TTCGTCGGTGGTTTCATCCCGCTCATCCCATACTTCATCGTCGACCAGGT
GATAGTGGCATTGTACATGAGCATCGGAGTCATGGCAATCACGCTTCTGG
CCTTCGGATACATCAAGACATGTGTAGTGCGCGGCTGGTCCGGGCGCGAC
AACGTCGTCGCAGGCATCAAGGGAGGAATACAAATGTGTTTCGTGGGCGG
AGTCGCAGCTGGAGCAGCCATTGCCTTGGTCCGGTTGATCGACACCGGCG
GAGCGTGAGCAAACCACTACTTTCCAATGAAGATACCGATACCCTGCCGA
GCGAACAAGATCTCGAAGCTCAGCGGTCTTACTCTACCTTCCGCGCCTCA
TCTCCCGTTTCCGACACCGACAGCACCGCCGCCAGCACTAGCAGTTCGCG
ATCACGTATCAACCCGCGTATTGTATCGGATGCCATTCTAGGTTTATCCG
ATGGCTTGACGGTACCTTTCGCGCTGAGCGCTGGTCTCTCGGCGCTGGGT
AACACTAAGGTCGTTGTGCTTGGTGGATTGGCTGAATTGACGGCGGGTGC
CATCTCCATGGGCCTGGGAGGATATGTCGGTGCGAAGAGTGAAGCATGGC
GCTATTATTTCTGAAGCAGAAGCTCTTCCCGAGCGAAAAGCAAAAACAGG
CCCTTCCATATGTGAATCGTACGAGACCACCGTTCGTGAGGCAAAAGAAC
TCATCGACACATCGCCAGCCGAAACCAGTTCCATTGTCCAATCCATCTTC
GCTTCCTACCGTCTCCCCGAAGATGTCATCAACCAGATTAACATGTCCCT
CCACTCCTCTGAAGACCGCCTCCTCGACTTCCTGGTCAGCTTTCATCACA
AGGAATCCGAGCCTGACTGCAACCAGGCGTGGATCTCCGCCATCACACTC
GCCCTTGGCTACTTCGTCGGTGGTTTCATCCCGCTCATCCCATACTTCAT
CGTCGACCAGGTGATAGTGGCATTGTACATGAGCATCGGAGTCATGGCAA
TCACGCTTCTGGCCTTCGGATACATCAAGACATGTGTAGTGCGCGGCTGG
TCCGGGCGCGACAACGTCGTCGCAGGCATCAAGGGAGGAATACAAATGTG
TTTCGTGGGCGGAGTCGCAGCTGGAGCAGCCATTGCCTTGGTCCGGTTGA
TCGACACCGGCGGAGCGTGAGCAAACCACTACTTTCCAATGAAGATACCG
ATACCCTGCCGAGCGAACAAGATCTCGAAGCTCAGCGGTCTTACTCTACC
TTCCGCGCCTCATCTCCCGTTTCCGACACCGACAGCACCGCCGCCAGCAC
TAGCAGTTCGCGATCACGTATCAACCCGCGTATTGTATCGGATGCCATTC
TAGGTTTATCCGATGGCTTGACGGTACCTTTCGCGCTGAGCGCTGGTCTC
TCGGCGCTGGGTAACACTAAGGTCGTTGTGCTTGGTGGATTGGCTGAATT
GACGGCGGGTGCCATCTCCATGGGCCTGGGAGGATATGTCGGTGCGAAGA
GTGAAGCATGGCGCTATTATTTCTGAAGCAGAAGCTCTTCCCGAGCGAAA
AGCAAAAACAGGCCCTTCCATATGTGAATCGTACGAGACCACCGTTCGTG
AGGCAAAAGAACTCATCGACACATCGCCAGCCGAAACCAGTTCCATTGTC
CAATCCATCTTCGCTTCCTACCGTCTCCCCGAAGATGTCATCAACCAGAT
TAACATGTCCCTCCACTCCTCTGAAGACCGCCTCCTCGACTTCCTGGTCA
GCTTTCATCACAAGGAATCCGAGCCTGACTGCAACCAGGCGTGGATCTCC
GCCATCACACTCGCCCTTGGCTACTTCGTCGGTGGTTTCATCCCGCTCAT
CCCATACTTCATCGTCGACCAGGTGATAGTGGCATTGTACATGAGCATCG
GAGTCATGGCAATCACGCTTCTGGCCTTCGGATACATCAAGACATGTGTA
GTGCGCGGCTGGTCCGGGCGCGACAACGTCGTCGCAGGCATCAAGGGAGG
AATACAAATGTGTTTCGTGGGCGGAGTCGCAGCTGGAGCAGCCATTGCCT
TGGTCCGGTTGATCGACACCGGCGGAGCGTGAGCAAACCACTACTTTCCA
ATGAAGATACCGATACCCTGCCGAGCGAACAAGATCTCGAAGCTCAGCGG
TCTTACTCTACCTTCCGCGCCTCATCTCCCGTTTCCGACACCGACAGCAC
CGCCGCCAGCACTAGCAGTTCGCGATCACGTATCAACCCGCGTATTGTAT
CGGATGCCATTCTAGGTTTATCCGATGGCTTGACGGTACCTTTCGCGCTG
AGCGCTGGTCTCTCGGCGCTGGGTAACACTAAGGTCGTTGTGCTTGGTGG
ATTGGCTGAATTGACGGCGGGTGCCATCTCCATGGGCCTGGGAGGATATG
TCGGTGCGAAGAGTGAAGCATGGCGCTATTATTTCTGAAGCAGAAGCTCT
TCCCGAGCGAAAAGCAAAAACAGGCCCTTCCATATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030026 | cellular manganese ion homeostasis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005384 | manganese ion transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR008217 |
| DBxref | PFAM:PF01988 |
| Product | VIT family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:1736775..1737790 - |
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