You are here

Home

CAN33_3900-T1, CAN33_3900-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3900-T1
Unique NameCAN33_3900-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:66878..67357-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3900-T1 ID=CAN33_3900-T1|Name=CAN33_3900-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=480bp|location=Sequence derived from alignment at NKJJ01000019.1:66878..67357- (Aspergillus niger FDAARGOS_311)
ATGGGCTTCCCTGCGCTGGGCATCGATCTTCTCAATAATGGCGCCGCACT
GGAAGCTGCTGCTGCGCTTTACGCCAGTTGTGTGACCTGGACGGTTCTGT
ATGACATGATATACGCGCATATGGACATTAAAGATGACGTTGCGGCTGGC
ATTAAGTCTATTGCTCTTCGTCACGAAAAGAACACAAAAGCTGTGCTTTC
AGCTCTCGCCGCCGTACAGGTGCCGTTACTCGCCGCTGCAGGTGTAGCAG
CAGGAAGCGGGCCTATCTTCTTCATCGGCAGTTGTGGCAGTGCGGCTGTC
TCCCTCGGTCTCATGATCTGGAAAGTCCAATTAAAAAATGTACAAAATTG
CTGGTGGTGGTTCAAGAACGGTTGCTTGCTCACCGGTGGAGGTATTACCC
TGGGAATGCTCCTTGATTATGTCGCGCAAACCACAGGGTTTTATAAACCG
GTTGAGGAGCCGGTTTCCCTTGAGAGCTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:66878..67357-

>CAN33_3900-T1 ID=CAN33_3900-T1|Name=CAN33_3900-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=480bp|location=Sequence derived from alignment at NKJJ01000019.1:66878..67357- (Aspergillus niger FDAARGOS_311)
ATGGGCTTCCCTGCGCTGGGCATCGATCTTCTCAATAATGGCGCCGCACT
GGAAGCTGCTGCTGCGCTTTACGCCAGTTGTGTGACCTGGACGGTTCTGT
ATGACATGATATACGCGCATATGGACATTAAAGATGACGTTGCGGCTGGC
ATTAAGTCTATTGCTCTTCGTCACGAAAAGAACACAAAAGCTGTGCTTTC
AGCTCTCGCCGCCGTACAGGTGCCGTTACTCGCCGCTGCAGGTGTAGCAG
CAGGAAGCGGGCCTATCTTCTTCATCGGCAGTTGTGGCAGTGCGGCTGTC
TCCCTCGGTCTCATGATCTGGAAAGTCCAATTAAAAAATGTACAAAATTG
CTGGTGGTGGTTCAAGAACGGTTGCTTGCTCACCGGTGGAGGTATTACCC
TGGGAATGCTCCTTGATTATGTCGCGCAAACCACAGGGTTTTATAAACCG
GTTGAGGAGCCGGTTTCCCTTGAGAGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3900CAN33_3900Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3900-T1.cdsCAN33_3900-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3900-T1.exon1CAN33_3900-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3900-T1CAN33_3900-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR000537
ProductUbiA prenyltransferase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:66878..67357 -
Powered by Drupal