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CAN33_3925-T1, CAN33_3925-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3925-T1
Unique NameCAN33_3925-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:73813..74810-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3925-T1 ID=CAN33_3925-T1|Name=CAN33_3925-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=998bp|location=Sequence derived from alignment at NKJJ01000019.1:73813..74810- (Aspergillus niger FDAARGOS_311)
ATGTCCCCTCGTATGCCCCGGAAGCTTTCCCAGCTTCCCCTGACGACAAT
CTGGGCGTCTCAATTCCCGACTTCTTCCATCCGCAGCAGCCAATTGTCCA
TCACCTCAGTCCGCTCCTTCGGTATCCGGTCCTTGAACCCCCCGGAGACT
TCGCGCTTCAACGTCAGCCATGACCTGCCCGTGCTGAAATCGACACCCAC
CGCCGCCCTCGAGCGCAAGGCCAACACCCTTCCCCTGCGGACCGGTGCCA
TCACCTTCAAGAAGGGCATGACCGCCCTGTATGACCCCGAGACCGGCAAA
CGTGTTCCCTGCACCGTGCTGCAGCTCGATCGAGTCGAAGTCGTCTCGCA
CAAGACTCGCCAGAAGCATGGATACTATGCTGTTCAGCTGGGTGCTGGAT
GGAGGCGTCCCGATAACTTGACCAAGTCCCTGCTCGGTCATTTCACTGCC
AATGGCATCTCGCCCAAGCGTCATGTCTATGAGTTCCGGGTTAAGGATGA
GAGCGGGCTTTTGCCTGTTGGGCAGACTGTCAGTGCGGACTGGTTTCAGG
AGGGACAGTTCGTTGATGCGAGGTCTAATACGAAGGGTAAGGGCTTCGCG
GGTGTTATGAAGAGACATGGTTTCGGTGGTCAGGATCGCAGTCACGGTGT
ATCCTTGACGCATCGTTCGCTTGGTTCCGCTGGTCCTAGTCAGGGTGGTG
GTTCTCGTGTTTACCCTGGAAAGAAGATGGCGGGTAACATGGGTAATGAG
CAGAACACGGTTCAGAATCTGAGGATTTTGAAGGTGGACGCTGAGAATGG
AATTGTTGTGGTCAATGGTAGGATACCCCGAAATACTCCTCTGTTTAAGT
GGATTTCATATATGTAAAAGTTGATGCTGACTTTTGGGTTTTAATAGGAT
CCGTCAGTGGTCCCAAGGGCTGCGTTGTCCGGATACAGGATGCTATTAAG
AAGCCGTGGCCGGAAGCTTCCCCTGCGACTACTGAGGCTTCTGAATAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:73813..74810-

>CAN33_3925-T1 ID=CAN33_3925-T1|Name=CAN33_3925-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1836bp|location=Sequence derived from alignment at NKJJ01000019.1:73813..74810- (Aspergillus niger FDAARGOS_311)
GATCCGTCAGTGGTCCCAAGGGCTGCGTTGTCCGGATACAGGATGCTATT
AAGAAGCCGTGGCCGGAAGCTTCCCCTGCGACTACTGAGGCTTCTGAATA
AATGTCCCCTCGTATGCCCCGGAAGCTTTCCCAGCTTCCCCTGACGACAA
TCTGGGCGTCTCAATTCCCGACTTCTTCCATCCGCAGCAGCCAATTGTCC
ATCACCTCAGTCCGCTCCTTCGGTATCCGGTCCTTGAACCCCCCGGAGAC
TTCGCGCTTCAACGTCAGCCATGACCTGCCCGTGCTGAAATCGACACCCA
CCGCCGCCCTCGAGCGCAAGGCCAACACCCTTCCCCTGCGGACCGGTGCC
ATCACCTTCAAGAAGGGCATGACCGCCCTGTATGACCCCGAGACCGGCAA
ACGTGTTCCCTGCACCGTGCTGCAGCTCGATCGAGTCGAAGTCGTCTCGC
ACAAGACTCGCCAGAAGCATGGATACTATGCTGTTCAGCTGGGTGCTGGA
TGGAGGCGTCCCGATAACTTGACCAAGTCCCTGCTCGGTCATTTCACTGC
CAATGGCATCTCGCCCAAGCGTCATGTCTATGAGTTCCGGGTTAAGGATG
AGAGCGGGCTTTTGCCTGTTGGGCAGACTGTCAGTGCGGACTGGTTTCAG
GAGGGACAGTTCGTTGATGCGAGGTCTAATACGAAGGGTAAGGGCTTCGC
GGGTGTTATGAAGAGACATGGTTTCGGTGGTCAGGATCGCAGTCACGGTG
TATCCTTGACGCATCGTTCGCTTGGTTCCGCTGGTCCTAGTCAGGGTGGT
GGTTCTCGTGTTTACCCTGGAAAGAAGATGGCGGGTAACATGGGTAATGA
GCAGAACACGGTTCAGAATCTGAGGATTTTGAAGGTGGACGCTGAGAATG
GAATTGTTGTGGTCAATGGATCCGTCAGTGGTCCCAAGGGCTGCGTTGTC
CGGATACAGGATGCTATTAAGAAGCCGTGGCCGGAAGCTTCCCCTGCGAC
TACTGAGGCTTCTGAATAAATGTCCCCTCGTATGCCCCGGAAGCTTTCCC
AGCTTCCCCTGACGACAATCTGGGCGTCTCAATTCCCGACTTCTTCCATC
CGCAGCAGCCAATTGTCCATCACCTCAGTCCGCTCCTTCGGTATCCGGTC
CTTGAACCCCCCGGAGACTTCGCGCTTCAACGTCAGCCATGACCTGCCCG
TGCTGAAATCGACACCCACCGCCGCCCTCGAGCGCAAGGCCAACACCCTT
CCCCTGCGGACCGGTGCCATCACCTTCAAGAAGGGCATGACCGCCCTGTA
TGACCCCGAGACCGGCAAACGTGTTCCCTGCACCGTGCTGCAGCTCGATC
GAGTCGAAGTCGTCTCGCACAAGACTCGCCAGAAGCATGGATACTATGCT
GTTCAGCTGGGTGCTGGATGGAGGCGTCCCGATAACTTGACCAAGTCCCT
GCTCGGTCATTTCACTGCCAATGGCATCTCGCCCAAGCGTCATGTCTATG
AGTTCCGGGTTAAGGATGAGAGCGGGCTTTTGCCTGTTGGGCAGACTGTC
AGTGCGGACTGGTTTCAGGAGGGACAGTTCGTTGATGCGAGGTCTAATAC
GAAGGGTAAGGGCTTCGCGGGTGTTATGAAGAGACATGGTTTCGGTGGTC
AGGATCGCAGTCACGGTGTATCCTTGACGCATCGTTCGCTTGGTTCCGCT
GGTCCTAGTCAGGGTGGTGGTTCTCGTGTTTACCCTGGAAAGAAGATGGC
GGGTAACATGGGTAATGAGCAGAACACGGTTCAGAATCTGAGGATTTTGA
AGGTGGACGCTGAGAATGGAATTGTTGTGGTCAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3925CAN33_3925Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3925-T1CAN33_3925-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3925-T1.cdsCAN33_3925-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3925-T1.exon2CAN33_3925-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3925-T1.exon1CAN33_3925-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092642CB
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR019926
DBxrefInterPro:IPR000597
DBxrefInterPro:IPR019927
Product50S ribosomal protein L3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:73813..74810 -
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