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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2091492..2093298- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39520-T1 ID=CAN33_39520-T1|Name=CAN33_39520-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1807bp|location=Sequence derived from alignment at NKJJ01000017.1:2091492..2093298- (Aspergillus niger FDAARGOS_311)
ATGGTATGTTGTTTATGACGCCCATCCTCTTGTTACGTCGCTTTCGACTA
ATTACTAACCGCCCCTCAAGGCGTCCTTCGCCAATCCCACGCAGATCTTT
GCGGACGATGTCATCGAAGAGAAGGGTGAGAATGCTCGTTTGTCCGCCTT
CGTCGGTGCCATCGCCGTTGGAGACCTGGTGAAGAGCACCCTGGGTCCCA
AGGGAATGGACAAGATCCTCCAGTCAGCGTATGTGGGATGACCCATTCGA
GCTAAGCGGGGTTGCACCCCCCGAACACCACACTGATATTACGGCTGATA
CAGGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATTCTTA
AGTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTGGTCAACATCTCG
AAGGTGCAGGATGACGAAGTTGGTGACGGCACCACCTCCGTGACCGTGTT
GGCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAGATCC
ACCCCCAGACCATCATTGAGGGATACCGGATAGCTAGCAAGGCGGCTCTG
GAGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGTCGTT
CCGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAGGTCC
TGGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGTCCTC
CGTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGAAGGC
CGGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTCGACA
AGAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGATTCTG
GTCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTGCACG
GGTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCGGAGC
GTGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAATCAAC
TGCTTCGTCAACCGTCAACTTATCTACAACTGGCCCGAACAGCTGTTCAC
GGAAGCTGGCATCATGTCCATTGAGCATGCCGACTTCGATGGTGTTGAGC
GCTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCACCCC
GAACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCATTGG
CGAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCATGCA
CCATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGAGCGC
TCCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACCCCCG
GGTGACCCTGGGAGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCCGTTG
AGCAGGCTGCCCAGAACACGACCGGCAAGAAGCAAATGGCCGTGGATGCT
TTTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACGCTGG
TCTGGACTCCAGCGACCTGGTGACGCGACTACGACAGGCGATCAACAATG
GCATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCATTGCT
GACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGGCGGT
AGTGTCCTCTGCGTCGGAGGCTGCAGAGGTAAGAATCACATTCCTTTGAG
TTTATCTGGCAAAGTTTGATTATACTGAAAAACTAACCAACCTACAGCTT
CTCCTGCGTGTCGACAACATCATCCGGGCTGCGCCCCGTAGACGTGAGCG
TATGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2091492..2093298- >CAN33_39520-T1 ID=CAN33_39520-T1|Name=CAN33_39520-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6384bp|location=Sequence derived from alignment at NKJJ01000017.1:2091492..2093298- (Aspergillus niger FDAARGOS_311)
CTTCTCCTGCGTGTCGACAACATCATCCGGGCTGCGCCCCGTAGACGTGA
GCGTATGTAAGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACG
ATTCTTAAGTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTGGTCAA
CATCTCGAAGGTGCAGGATGACGAAGTTGGTGACGGCACCACCTCCGTGA
CCGTGTTGGCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGC
AAGATCCACCCCCAGACCATCATTGAGGGATACCGGATAGCTAGCAAGGC
GGCTCTGGAGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGG
AGTCGTTCCGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCG
AAGGTCCTGGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGC
TGTCCTCCGTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCA
AGAAGGCCGGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATC
CTCGACAAGAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAA
GATTCTGGTCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCG
GTGCACGGGTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAG
GCGGAGCGTGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGG
AATCAACTGCTTCGTCAACCGTCAACTTATCTACAACTGGCCCGAACAGC
TGTTCACGGAAGCTGGCATCATGTCCATTGAGCATGCCGACTTCGATGGT
GTTGAGCGCTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGA
CCACCCCGAACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCA
TCATTGGCGAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAG
GCATGCACCATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGC
CGAGCGCTCCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGG
ACCCCCGGGTGACCCTGGGAGGTGGCTGTGCCGAGATGGTGATGTCCAAG
GCCGTTGAGCAGGCTGCCCAGAACACGACCGGCAAGAAGCAAATGGCCGT
GGATGCTTTTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACA
ACGCTGGTCTGGACTCCAGCGACCTGGTGACGCGACTACGACAGGCGATC
AACAATGGCATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGG
CATTGCTGACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGA
AGGCGGTAGTGTCCTCTGCGTCGGAGGCTGCAGAGGCGTCCTTCGCCAAT
CCCACGCAGATCTTTGCGGACGATGTCATCGAAGAGAAGGGTGAGAATGC
TCGTTTGTCCGCCTTCGTCGGTGCCATCGCCGTTGGAGACCTGGTGAAGA
GCACCCTGGGTCCCAAGGGAATGGACAAGATCCTCCAGTCAGCATGCTTC
TCCTGCGTGTCGACAACATCATCCGGGCTGCGCCCCGTAGACGTGAGCGT
ATGTAAGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATTC
TTAAGTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTGGTCAACATC
TCGAAGGTGCAGGATGACGAAGTTGGTGACGGCACCACCTCCGTGACCGT
GTTGGCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAGA
TCCACCCCCAGACCATCATTGAGGGATACCGGATAGCTAGCAAGGCGGCT
CTGGAGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGTC
GTTCCGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAGG
TCCTGGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGTC
CTCCGTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGAA
GGCCGGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTCG
ACAAGAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGATT
CTGGTCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTGC
ACGGGTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCGG
AGCGTGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAATC
AACTGCTTCGTCAACCGTCAACTTATCTACAACTGGCCCGAACAGCTGTT
CACGGAAGCTGGCATCATGTCCATTGAGCATGCCGACTTCGATGGTGTTG
AGCGCTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCAC
CCCGAACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCAT
TGGCGAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCAT
GCACCATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGAG
CGCTCCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACCC
CCGGGTGACCCTGGGAGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCCG
TTGAGCAGGCTGCCCAGAACACGACCGGCAAGAAGCAAATGGCCGTGGAT
GCTTTTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACGC
TGGTCTGGACTCCAGCGACCTGGTGACGCGACTACGACAGGCGATCAACA
ATGGCATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCATT
GCTGACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGGC
GGTAGTGTCCTCTGCGTCGGAGGCTGCAGAGGCGTCCTTCGCCAATCCCA
CGCAGATCTTTGCGGACGATGTCATCGAAGAGAAGGGTGAGAATGCTCGT
TTGTCCGCCTTCGTCGGTGCCATCGCCGTTGGAGACCTGGTGAAGAGCAC
CCTGGGTCCCAAGGGAATGGACAAGATCCTCCAGTCAGCATGCTTCTCCT
GCGTGTCGACAACATCATCCGGGCTGCGCCCCGTAGACGTGAGCGTATGT
AAGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATTCTTAA
GTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTGGTCAACATCTCGA
AGGTGCAGGATGACGAAGTTGGTGACGGCACCACCTCCGTGACCGTGTTG
GCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAGATCCA
CCCCCAGACCATCATTGAGGGATACCGGATAGCTAGCAAGGCGGCTCTGG
AGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGTCGTTC
CGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAGGTCCT
GGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGTCCTCC
GTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGAAGGCC
GGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTCGACAA
GAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGATTCTGG
TCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTGCACGG
GTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCGGAGCG
TGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAATCAACT
GCTTCGTCAACCGTCAACTTATCTACAACTGGCCCGAACAGCTGTTCACG
GAAGCTGGCATCATGTCCATTGAGCATGCCGACTTCGATGGTGTTGAGCG
CTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCACCCCG
AACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCATTGGC
GAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCATGCAC
CATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGAGCGCT
CCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACCCCCGG
GTGACCCTGGGAGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCCGTTGA
GCAGGCTGCCCAGAACACGACCGGCAAGAAGCAAATGGCCGTGGATGCTT
TTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACGCTGGT
CTGGACTCCAGCGACCTGGTGACGCGACTACGACAGGCGATCAACAATGG
CATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCATTGCTG
ACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGGCGGTA
GTGTCCTCTGCGTCGGAGGCTGCAGAGGCGTCCTTCGCCAATCCCACGCA
GATCTTTGCGGACGATGTCATCGAAGAGAAGGGTGAGAATGCTCGTTTGT
CCGCCTTCGTCGGTGCCATCGCCGTTGGAGACCTGGTGAAGAGCACCCTG
GGTCCCAAGGGAATGGACAAGATCCTCCAGTCAGCATGCTTCTCCTGCGT
GTCGACAACATCATCCGGGCTGCGCCCCGTAGACGTGAGCGTATGTAAGT
CGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATTCTTAAGTCA
ATTGCTCTCGACAACGCTGCGGCCAAGGTTCTGGTCAACATCTCGAAGGT
GCAGGATGACGAAGTTGGTGACGGCACCACCTCCGTGACCGTGTTGGCTG
CGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAGATCCACCCC
CAGACCATCATTGAGGGATACCGGATAGCTAGCAAGGCGGCTCTGGAGGC
CTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGTCGTTCCGCA
AAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAGGTCCTGGCC
CAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGTCCTCCGTCT
CCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGAAGGCCGGTG
GCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTCGACAAGAAG
ATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGATTCTGGTCGC
CAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTGCACGGGTGA
AGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCGGAGCGTGAG
AAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAATCAACTGCTT
CGTCAACCGTCAACTTATCTACAACTGGCCCGAACAGCTGTTCACGGAAG
CTGGCATCATGTCCATTGAGCATGCCGACTTCGATGGTGTTGAGCGCTTG
GCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCACCCCGAACA
GGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCATTGGCGAGG
ATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCATGCACCATT
GTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGAGCGCTCCCT
CCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACCCCCGGGTGA
CCCTGGGAGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCCGTTGAGCAG
GCTGCCCAGAACACGACCGGCAAGAAGCAAATGGCCGTGGATGCTTTTGC
GTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACGCTGGTCTGG
ACTCCAGCGACCTGGTGACGCGACTACGACAGGCGATCAACAATGGCATG
ACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCATTGCTGACAT
GCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGGCGGTAGTGT
CCTCTGCGTCGGAGGCTGCAGAGGCGTCCTTCGCCAATCCCACGCAGATC
TTTGCGGACGATGTCATCGAAGAGAAGGGTGAGAATGCTCGTTTGTCCGC
CTTCGTCGGTGCCATCGCCGTTGGAGACCTGGTGAAGAGCACCCTGGGTC
CCAAGGGAATGGACAAGATCCTCCAGTCAGCATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005829 | cytosol |
| GO:0005832 | chaperonin-containing T-complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006457 | protein folding |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051082 | unfolded protein binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002194 |
| DBxref | InterPro:IPR012716 |
| DBxref | InterPro:IPR027410 |
| DBxref | InterPro:IPR027409 |
| DBxref | InterPro:IPR027413 |
| DBxref | InterPro:IPR002423 |
| DBxref | InterPro:IPR017998 |
| DBxref | PFAM:PF00118 |
| Product | T-complex protein 1 subunit beta |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2091492..2093298 - |
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