You are here

Home

CAN33_39710-T1, CAN33_39710-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_39710-T1
Unique NameCAN33_39710-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2201475..2202481-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_39710-T1 ID=CAN33_39710-T1|Name=CAN33_39710-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1007bp|location=Sequence derived from alignment at NKJJ01000017.1:2201475..2202481- (Aspergillus niger FDAARGOS_311)
ATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAACGTT
GGTTGGCGCCTCTACTCCTAGTTCCCACCATTTCAGTAACTCATTCTTTG
TATTAGAACCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAG
TATCTCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAA
AGCAGTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTT
ATTGCTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTC
GGCATTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCT
TCAATGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGT
CGGACCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTT
TACCCAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGG
TTTGTCACGATGCTTTTTACACTCATGATGCATTCTTCAGGAGCTAACAA
CTTCGTCCCCAGGGTCGGATACCTGATATAACTCTATCATGTATCCAATA
TCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAGGTTGAGAAGC
CTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGACATCGTGTTC
TACTCGAAGAGCTGGGCTCAAGTAAGGGTTACTTGGGCAATCTACATCGT
GTATCTCTCTGACCACTGACTTGCAGGGCAACGGATACCAAACTGCTGAA
GAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGTATGGTCCTTG
CTGTATCCTACACGTTGAATCTATGAGTGCTGATTTTACCAGGTCGTTGC
TGTGCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGACA
CAGAGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCAT
CGAGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:2201475..2202481-

>CAN33_39710-T1 ID=CAN33_39710-T1|Name=CAN33_39710-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3900bp|location=Sequence derived from alignment at NKJJ01000017.1:2201475..2202481- (Aspergillus niger FDAARGOS_311)
GTCGTTGCTGTGCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGA
CCAAGACACAGAGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTT
CGAGTCATCGAGTAAGGCAACGGATACCAAACTGCTGAAGAGTGTGTTCA
GAAAGAATCCACACTAACACGAAAAGCGGTCGGATACCTGATATAACTCT
ATCATGTATCCAATATCTCCGTCAACAGTACCCATCCGCGACTATCAGCG
TCGAGGTTGAGAAGCCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAA
GCCGACATCGTGTTCTACTCGAAGAGCTGGGCTCAAAACCCCCACTACCC
AGGAGAAGATGAGAAGCTACGGGCTTCGAGTATCTCCCATCGACGGGGAG
GTAATTGCCCAAACTCTCTGGAAGTTCTAAAGCAGTTGACAACGAACAGT
CCGTCAACTGCCAATGTCTCCCTGAACCTTATTGCTGTCCTACCTGCGAA
GACATCTACTGCTTCCCAGGAGATCCAGTCGGCATTCAAACCGCACGTTA
ACCTATCTCATTGTATCTTTCGAGAGGCCTTCAATGAGCCCGCCTCAAGC
TACATCATTAAAAGCGAATCGTCTGGCAGTCGGACCATTGTCAACTACAA
TGAACTGCCTGAGATCACGGTAGACGAGTTTACCCAGATTGCAGGCAATC
TCACCAACCCATCCTGGTTCCACTTTGAGATGTCATTGGTCGCAATAGGT
GCATGCTATCTGGATACAATCCTAACGTTGGTCGTTGCTGTGCTGCACTT
GGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGACACAGAGTCTGGTT
CATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCATCGAGTAAGGCAA
CGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAATCCACACTAACAC
GAAAAGCGGTCGGATACCTGATATAACTCTATCATGTATCCAATATCTCC
GTCAACAGTACCCATCCGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGG
CGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGACATCGTGTTCTACTC
GAAGAGCTGGGCTCAAAACCCCCACTACCCAGGAGAAGATGAGAAGCTAC
GGGCTTCGAGTATCTCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTG
GAAGTTCTAAAGCAGTTGACAACGAACAGTCCGTCAACTGCCAATGTCTC
CCTGAACCTTATTGCTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGG
AGATCCAGTCGGCATTCAAACCGCACGTTAACCTATCTCATTGTATCTTT
CGAGAGGCCTTCAATGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATC
GTCTGGCAGTCGGACCATTGTCAACTACAATGAACTGCCTGAGATCACGG
TAGACGAGTTTACCCAGATTGCAGGCAATCTCACCAACCCATCCTGGTTC
CACTTTGAGATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAAT
CCTAACGTTGGTCGTTGCTGTGCTGCACTTGGGGTCAAGGAGGTGCAGTG
GCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTGCATACTCTGC
AGCAAACTTTCGAGTCATCGAGTAAGGCAACGGATACCAAACTGCTGAAG
AGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGGTCGGATACCTG
ATATAACTCTATCATGTATCCAATATCTCCGTCAACAGTACCCATCCGCG
ACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGGTCTGCAAAACCT
CGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCTGGGCTCAAAACC
CCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAGTATCTCCCAT
CGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAAAGCAGTTGAC
AACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTTATTGCTGTCC
TACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTCGGCATTCAAA
CCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCTTCAATGAGCC
CGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGTCGGACCATTG
TCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTTTACCCAGATT
GCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGATGTCATTGGT
CGCAATAGGTGCATGCTATCTGGATACAATCCTAACGTTGGTCGTTGCTG
TGCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGACACA
GAGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCATCG
AGTAAGGCAACGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAATCC
ACACTAACACGAAAAGCGGTCGGATACCTGATATAACTCTATCATGTATC
CAATATCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAGGTTGA
GAAGCCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGACATCG
TGTTCTACTCGAAGAGCTGGGCTCAAAACCCCCACTACCCAGGAGAAGAT
GAGAAGCTACGGGCTTCGAGTATCTCCCATCGACGGGGAGGTAATTGCCC
AAACTCTCTGGAAGTTCTAAAGCAGTTGACAACGAACAGTCCGTCAACTG
CCAATGTCTCCCTGAACCTTATTGCTGTCCTACCTGCGAAGACATCTACT
GCTTCCCAGGAGATCCAGTCGGCATTCAAACCGCACGTTAACCTATCTCA
TTGTATCTTTCGAGAGGCCTTCAATGAGCCCGCCTCAAGCTACATCATTA
AAAGCGAATCGTCTGGCAGTCGGACCATTGTCAACTACAATGAACTGCCT
GAGATCACGGTAGACGAGTTTACCCAGATTGCAGGCAATCTCACCAACCC
ATCCTGGTTCCACTTTGAGATGTCATTGGTCGCAATAGGTGCATGCTATC
TGGATACAATCCTAACGTTGGTCGTTGCTGTGCTGCACTTGGGGTCAAGG
AGGTGCAGTGGCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTG
CATACTCTGCAGCAAACTTTCGAGTCATCGAGTAAGGCAACGGATACCAA
ACTGCTGAAGAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGGT
CGGATACCTGATATAACTCTATCATGTATCCAATATCTCCGTCAACAGTA
CCCATCCGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGGTC
TGCAAAACCTCGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCTGG
GCTCAAAACCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAG
TATCTCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAA
AGCAGTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTT
ATTGCTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTC
GGCATTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCT
TCAATGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGT
CGGACCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTT
TACCCAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGA
TGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAACGTTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_39710CAN33_39710Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39710-T1CAN33_39710-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39710-T1.cdsCAN33_39710-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_39710-T1.exon5CAN33_39710-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_39710-T1.exon4CAN33_39710-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_39710-T1.exon3CAN33_39710-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_39710-T1.exon2CAN33_39710-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_39710-T1.exon1CAN33_39710-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR011611
DBxrefInterPro:IPR029056
DBxrefPFAM:PF00294
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2201475..2202481 -
Powered by Drupal