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CAN33_3975-T1, CAN33_3975-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3975-T1
Unique NameCAN33_3975-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:113439..115204-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3975-T1 ID=CAN33_3975-T1|Name=CAN33_3975-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1766bp|location=Sequence derived from alignment at NKJJ01000019.1:113439..115204- (Aspergillus niger FDAARGOS_311)
ATGTCCCCTCTCAGAGGTTACATCACATCATACCCGCCCCGTGTGCGCCA
ATATGGCAATGCGCTTCTCACCCCGATTATCCCACCCAGCCAAGTTGGCC
CGACTTCACGGACGACCAAGCGAGGAACCGCCGCTATCAATTATGCGGAA
GATGGTTACGACGATGAAGACTTTGAGGACAGCGAGGGTCCTCGGCGGCC
AACCGGGCTAAGGAGCCTTCGACGGGAAGAGTCAACGTTCGACAAGGTGC
CACTGGCGGAGAAGCTGGGGAAAGAGATACACGCCCCTGTTGAGGTCCAA
GGGGTTTTTCGCGATTGGATGATCAAGAGAATGTTGCGACCAGCGTATGT
GCCTCTCAACTTGATTCTTCAAGCGATTCCAGTTTACCTCTGCGTCCTTT
CTGCTTTTGCTATGATACTGACTTGGAATCTTTTCTCCCTTTGTACAGTT
GCGCCGATCAACTGCAAATCCAAGCGCAGCTTCCTCTTACCCTTATACCT
ATCCGAATTGATTTGGAGGTCCCAGCGCATCAGCCCCTAGAACCATTCCC
TTTGCCGCGAACAGTCCTCGATCCCAGTATCAACCCTACCTTGCCCGCCT
ACAGACGGCCGGAGGCGCTGCCTGCCTATCGCATCAAAGACACGTTCCTT
TGGAATCTTCACGAGGCTCTTGCGACTCCCGAAGAGTTTGCCGTAGGATT
CGTTCGCGATATGGACCTACCGAATCCCCAGGCCATGACGATGGCTATTA
GCAACCAGATTCGTCAACAATTGGAAGAATATGCCGGCGTTGCCCTGCAT
CCGTTATTCCAGAGTGTACAGCCGAAGCCTCCAGTTCCGCAGATTGGCCT
GTCGCGAGATGTGTCTGCTACACCGGTTTCCACCCACGCCGCGACGCCTG
ACAGCAGACCCAACCAAGTAACGGTGACCAAAGAACCTCTCGTGAACGAC
AGCATACTAAACCCGGATGACGCGTATCGGTGCATGATCAACCTAAATAT
CAACTTGCAAAACAAACTGTACACGGACAAGTTTGAATGGTCTCTATTGC
ATCCTCCGGGTATGGCGGAGGAGTTTGCCAGAATTACGTGCGCGGACCTT
GGTCTAGGTGGGGAATGGGTCGGGGCCATTGCGCATGGCATCTACGAAGC
CGCTCTGAAATTGAAGAAAGAAGTATGCGAAAGTGGTGGACTCATCAGCG
GCATGGGTGGTTATGGTAATGAGATCGACAATCAAGCTGCCAACGGCGCG
GAGGCGGGCTGGCGTTACGATCCCGAGGGACTAGGCGACGAATGGGAACC
TAAGGTGGAAACGCTGTCAAAGGAGGAAATTGAGAAGCGTGAGGGTGATC
GCGAACGTCAGATTCGTCGTCTACGTCGAGAGACGGCCAGATTCTCCTCG
ACTGCGGGCATAACGCCCGACGCCTCCCGACAGGGCAGTGGTTACTTTGA
CGTCGACAGTGAGACGCCGCTCGGAAGAGGCGAGCGGAGCAAACGGAAGA
GACGATTCCGCAGCCTGAGTCCCTCGGGGAGAGGAGGAACCCCTGGAGGA
CGAGGGACTCCGGACACTGGTTCAGGAGCTGGCTATGGTGGAGGTGGCGG
TACACTTGCTGACTGGTTCGTTATGCCTATAAATTCTCTTCATAGAGCAC
ATGCTGACCACCGCCTTTGCTCGATAGGGAGCGCCAAACTTGGAGATGCA
CCAACTGTATGGTTTGGGGTACGGCGGTTTGGGCCGTACGAGATGGCCCA
GCAGGTCCAAGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:113439..115204-

>CAN33_3975-T1 ID=CAN33_3975-T1|Name=CAN33_3975-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4752bp|location=Sequence derived from alignment at NKJJ01000019.1:113439..115204- (Aspergillus niger FDAARGOS_311)
GGAGCGCCAAACTTGGAGATGCACCAACTGTATGGTTTGGGGTACGGCGG
TTTGGGCCGTACGAGATGGCCCAGCAGGTCCAAGAGTAATTGCGCCGATC
AACTGCAAATCCAAGCGCAGCTTCCTCTTACCCTTATACCTATCCGAATT
GATTTGGAGGTCCCAGCGCATCAGCCCCTAGAACCATTCCCTTTGCCGCG
AACAGTCCTCGATCCCAGTATCAACCCTACCTTGCCCGCCTACAGACGGC
CGGAGGCGCTGCCTGCCTATCGCATCAAAGACACGTTCCTTTGGAATCTT
CACGAGGCTCTTGCGACTCCCGAAGAGTTTGCCGTAGGATTCGTTCGCGA
TATGGACCTACCGAATCCCCAGGCCATGACGATGGCTATTAGCAACCAGA
TTCGTCAACAATTGGAAGAATATGCCGGCGTTGCCCTGCATCCGTTATTC
CAGAGTGTACAGCCGAAGCCTCCAGTTCCGCAGATTGGCCTGTCGCGAGA
TGTGTCTGCTACACCGGTTTCCACCCACGCCGCGACGCCTGACAGCAGAC
CCAACCAAGTAACGGTGACCAAAGAACCTCTCGTGAACGACAGCATACTA
AACCCGGATGACGCGTATCGGTGCATGATCAACCTAAATATCAACTTGCA
AAACAAACTGTACACGGACAAGTTTGAATGGTCTCTATTGCATCCTCCGG
GTATGGCGGAGGAGTTTGCCAGAATTACGTGCGCGGACCTTGGTCTAGGT
GGGGAATGGGTCGGGGCCATTGCGCATGGCATCTACGAAGCCGCTCTGAA
ATTGAAGAAAGAAGTATGCGAAAGTGGTGGACTCATCAGCGGCATGGGTG
GTTATGGTAATGAGATCGACAATCAAGCTGCCAACGGCGCGGAGGCGGGC
TGGCGTTACGATCCCGAGGGACTAGGCGACGAATGGGAACCTAAGGTGGA
AACGCTGTCAAAGGAGGAAATTGAGAAGCGTGAGGGTGATCGCGAACGTC
AGATTCGTCGTCTACGTCGAGAGACGGCCAGATTCTCCTCGACTGCGGGC
ATAACGCCCGACGCCTCCCGACAGGGCAGTGGTTACTTTGACGTCGACAG
TGAGACGCCGCTCGGAAGAGGCGAGCGGAGCAAACGGAAGAGACGATTCC
GCAGCCTGAGTCCCTCGGGGAGAGGAGGAACCCCTGGAGGACGAGGGACT
CCGGACACTGGTTCAGGAGCTGGCTATGGTGGAGGTGGCGATGTCCCCTC
TCAGAGGTTACATCACATCATACCCGCCCCGTGTGCGCCAATATGGCAAT
GCGCTTCTCACCCCGATTATCCCACCCAGCCAAGTTGGCCCGACTTCACG
GACGACCAAGCGAGGAACCGCCGCTATCAATTATGCGGAAGATGGTTACG
ACGATGAAGACTTTGAGGACAGCGAGGGTCCTCGGCGGCCAACCGGGCTA
AGGAGCCTTCGACGGGAAGAGTCAACGTTCGACAAGGTGCCACTGGCGGA
GAAGCTGGGGAAAGAGATACACGCCCCTGTTGAGGTCCAAGGGGTTTTTC
GCGATTGGATGATCAAGAGAATGTTGCGACCAGCGGAGCGCCAAACTTGG
AGATGCACCAACTGTATGGTTTGGGGTACGGCGGTTTGGGCCGTACGAGA
TGGCCCAGCAGGTCCAAGAGTAATTGCGCCGATCAACTGCAAATCCAAGC
GCAGCTTCCTCTTACCCTTATACCTATCCGAATTGATTTGGAGGTCCCAG
CGCATCAGCCCCTAGAACCATTCCCTTTGCCGCGAACAGTCCTCGATCCC
AGTATCAACCCTACCTTGCCCGCCTACAGACGGCCGGAGGCGCTGCCTGC
CTATCGCATCAAAGACACGTTCCTTTGGAATCTTCACGAGGCTCTTGCGA
CTCCCGAAGAGTTTGCCGTAGGATTCGTTCGCGATATGGACCTACCGAAT
CCCCAGGCCATGACGATGGCTATTAGCAACCAGATTCGTCAACAATTGGA
AGAATATGCCGGCGTTGCCCTGCATCCGTTATTCCAGAGTGTACAGCCGA
AGCCTCCAGTTCCGCAGATTGGCCTGTCGCGAGATGTGTCTGCTACACCG
GTTTCCACCCACGCCGCGACGCCTGACAGCAGACCCAACCAAGTAACGGT
GACCAAAGAACCTCTCGTGAACGACAGCATACTAAACCCGGATGACGCGT
ATCGGTGCATGATCAACCTAAATATCAACTTGCAAAACAAACTGTACACG
GACAAGTTTGAATGGTCTCTATTGCATCCTCCGGGTATGGCGGAGGAGTT
TGCCAGAATTACGTGCGCGGACCTTGGTCTAGGTGGGGAATGGGTCGGGG
CCATTGCGCATGGCATCTACGAAGCCGCTCTGAAATTGAAGAAAGAAGTA
TGCGAAAGTGGTGGACTCATCAGCGGCATGGGTGGTTATGGTAATGAGAT
CGACAATCAAGCTGCCAACGGCGCGGAGGCGGGCTGGCGTTACGATCCCG
AGGGACTAGGCGACGAATGGGAACCTAAGGTGGAAACGCTGTCAAAGGAG
GAAATTGAGAAGCGTGAGGGTGATCGCGAACGTCAGATTCGTCGTCTACG
TCGAGAGACGGCCAGATTCTCCTCGACTGCGGGCATAACGCCCGACGCCT
CCCGACAGGGCAGTGGTTACTTTGACGTCGACAGTGAGACGCCGCTCGGA
AGAGGCGAGCGGAGCAAACGGAAGAGACGATTCCGCAGCCTGAGTCCCTC
GGGGAGAGGAGGAACCCCTGGAGGACGAGGGACTCCGGACACTGGTTCAG
GAGCTGGCTATGGTGGAGGTGGCGATGTCCCCTCTCAGAGGTTACATCAC
ATCATACCCGCCCCGTGTGCGCCAATATGGCAATGCGCTTCTCACCCCGA
TTATCCCACCCAGCCAAGTTGGCCCGACTTCACGGACGACCAAGCGAGGA
ACCGCCGCTATCAATTATGCGGAAGATGGTTACGACGATGAAGACTTTGA
GGACAGCGAGGGTCCTCGGCGGCCAACCGGGCTAAGGAGCCTTCGACGGG
AAGAGTCAACGTTCGACAAGGTGCCACTGGCGGAGAAGCTGGGGAAAGAG
ATACACGCCCCTGTTGAGGTCCAAGGGGTTTTTCGCGATTGGATGATCAA
GAGAATGTTGCGACCAGCGGAGCGCCAAACTTGGAGATGCACCAACTGTA
TGGTTTGGGGTACGGCGGTTTGGGCCGTACGAGATGGCCCAGCAGGTCCA
AGAGTAATTGCGCCGATCAACTGCAAATCCAAGCGCAGCTTCCTCTTACC
CTTATACCTATCCGAATTGATTTGGAGGTCCCAGCGCATCAGCCCCTAGA
ACCATTCCCTTTGCCGCGAACAGTCCTCGATCCCAGTATCAACCCTACCT
TGCCCGCCTACAGACGGCCGGAGGCGCTGCCTGCCTATCGCATCAAAGAC
ACGTTCCTTTGGAATCTTCACGAGGCTCTTGCGACTCCCGAAGAGTTTGC
CGTAGGATTCGTTCGCGATATGGACCTACCGAATCCCCAGGCCATGACGA
TGGCTATTAGCAACCAGATTCGTCAACAATTGGAAGAATATGCCGGCGTT
GCCCTGCATCCGTTATTCCAGAGTGTACAGCCGAAGCCTCCAGTTCCGCA
GATTGGCCTGTCGCGAGATGTGTCTGCTACACCGGTTTCCACCCACGCCG
CGACGCCTGACAGCAGACCCAACCAAGTAACGGTGACCAAAGAACCTCTC
GTGAACGACAGCATACTAAACCCGGATGACGCGTATCGGTGCATGATCAA
CCTAAATATCAACTTGCAAAACAAACTGTACACGGACAAGTTTGAATGGT
CTCTATTGCATCCTCCGGGTATGGCGGAGGAGTTTGCCAGAATTACGTGC
GCGGACCTTGGTCTAGGTGGGGAATGGGTCGGGGCCATTGCGCATGGCAT
CTACGAAGCCGCTCTGAAATTGAAGAAAGAAGTATGCGAAAGTGGTGGAC
TCATCAGCGGCATGGGTGGTTATGGTAATGAGATCGACAATCAAGCTGCC
AACGGCGCGGAGGCGGGCTGGCGTTACGATCCCGAGGGACTAGGCGACGA
ATGGGAACCTAAGGTGGAAACGCTGTCAAAGGAGGAAATTGAGAAGCGTG
AGGGTGATCGCGAACGTCAGATTCGTCGTCTACGTCGAGAGACGGCCAGA
TTCTCCTCGACTGCGGGCATAACGCCCGACGCCTCCCGACAGGGCAGTGG
TTACTTTGACGTCGACAGTGAGACGCCGCTCGGAAGAGGCGAGCGGAGCA
AACGGAAGAGACGATTCCGCAGCCTGAGTCCCTCGGGGAGAGGAGGAACC
CCTGGAGGACGAGGGACTCCGGACACTGGTTCAGGAGCTGGCTATGGTGG
AGGTGGCGATGTCCCCTCTCAGAGGTTACATCACATCATACCCGCCCCGT
GTGCGCCAATATGGCAATGCGCTTCTCACCCCGATTATCCCACCCAGCCA
AGTTGGCCCGACTTCACGGACGACCAAGCGAGGAACCGCCGCTATCAATT
ATGCGGAAGATGGTTACGACGATGAAGACTTTGAGGACAGCGAGGGTCCT
CGGCGGCCAACCGGGCTAAGGAGCCTTCGACGGGAAGAGTCAACGTTCGA
CAAGGTGCCACTGGCGGAGAAGCTGGGGAAAGAGATACACGCCCCTGTTG
AGGTCCAAGGGGTTTTTCGCGATTGGATGATCAAGAGAATGTTGCGACCA
GC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000228nuclear chromosome
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3975CAN33_3975Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3975-T1CAN33_3975-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3975-T1.cdsCAN33_3975-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3975-T1.exon3CAN33_3975-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_3975-T1.exon2CAN33_3975-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3975-T1.exon1CAN33_3975-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR006939
DBxrefPFAM:PF04855
ProductSNF5 / SMARCB1 / INI1 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:113439..115204 -
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