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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2253394..2254922+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_39810-T1 ID=CAN33_39810-T1|Name=CAN33_39810-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1529bp|location=Sequence derived from alignment at NKJJ01000017.1:2253394..2254922+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTGTAAGTTCCAATTCCGATGAAATGCGTGGTGTTCATCACCG
CTGACTCTCCCCGACAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTC
CGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGTGT
CGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCC
AGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAA
GGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGG
TAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTC
CCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAG
ACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAA
GGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACC
GCAGTGTTACTGGTGTAAGTGAGGCCTTGGGTGAGCTCTCATTGACGAAC
GCTTCTGACATCAGTTATCTTTTAGGGAAACAAACAAGGCAAGCTCACCA
TCAAGACGACCGACATGGAAACGATCTACGACATGGGAACAAAGATGATC
GACTCAATGACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTGA
CAAATCCTCGGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCGC
GCGACTATGATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAG
GGTGAACTCCAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATGA
GATCGATGTGATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTG
GAGATACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAAG
GTGGCGGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCT
TTTCATTGATGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATCA
ACCGCGCTCTGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAAC
CGGGGCCACGCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCCT
TCCCCTGGATTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTACT
CTGCCGATGAGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAG
ATCGACCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGA
GTCGAATCTACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTCA
GCCAAAAGCGTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGT
TACCGGCTGTTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACATA
CGAACAGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTA
CAAACGGAGATGCGATGGAGCTTTCATAG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2253394..2254922+ >CAN33_39810-T1 ID=CAN33_39810-T1|Name=CAN33_39810-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4230bp|location=Sequence derived from alignment at NKJJ01000017.1:2253394..2254922+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTCCAATTTCTACCGTCGCGGAGACCAAGGAGCTCCGGGGTCT
CAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGTGTCGATGCAG
ACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCCAGGAGAAG
GCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAAGGCAAGAT
TGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGGTAAAACAG
CCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTCCCTTCACA
ATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAGACCGAGGC
GCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAAGGAGGAGA
GTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACCGCAGTGTT
ACTGGTGGAAACAAACAAGGCAAGCTCACCATCAAGACGACCGACATGGA
AACGATCTACGACATGGGAACAAAGATGATCGACTCAATGACCAAGGAAC
GAGTGATGGCCGGTGACATTATCTCCATTGACAAATCCTCGGGCAAGATA
ACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGACTATGATGCGATGGG
AGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGAACTCCAGGTTCGCA
AGGAAATCGTGCACACCGTCAGCCTTCATGAGATCGATGTGATCAACTCG
CGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGATACCGGTGAGATCAG
GAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGCGGAGTGGAAGGAAG
AAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCATTGATGAAGTGCAC
ATGCTTGACATTGAATGCTTCTCTTACATCAACCGCGCTCTGGAGGCGGA
ACTGGCACCCATCGTCATCATGGCTAGCAACCGGGGCCACGCCCGGATTC
GTGGTACGACATACAGCTCTCCGCACGGCCTTCCCCTGGATTTCCTCGAC
CGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCCGATGAGATTAGGCA
GATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGACCTTTCTCCGGACG
CTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGAATCTACGCTACGCC
AGCAACATCATCACCACCTCCCATTTGCTCAGCCAAAAGCGTAAGGCGAA
GGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCGGCTGTTCTACGACC
CTGCACGGAGCGTCAAATTCGTCAGCACATACGAACAGCGTTTCATCGGC
GATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAACGGAGATGCGATGGA
GCTTTCATAGATGGCTGCTCCAATTTCTACCGTCGCGGAGACCAAGGAGC
TCCGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGT
GTCGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGG
CCAGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGG
AAGGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACT
GGTAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGT
TCCCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCA
AGACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATC
AAGGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGA
CCGCAGTGTTACTGGTGGAAACAAACAAGGCAAGCTCACCATCAAGACGA
CCGACATGGAAACGATCTACGACATGGGAACAAAGATGATCGACTCAATG
ACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTGACAAATCCTC
GGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGACTATG
ATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGAACTC
CAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATGAGATCGATGT
GATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGATACCG
GTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGCGGAG
TGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCATTGA
TGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATCAACCGCGCTC
TGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAACCGGGGCCAC
GCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCCTTCCCCTGGA
TTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCCGATG
AGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGACCTT
TCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGAATCT
ACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTCAGCCAAAAGC
GTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCGGCTG
TTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACATACGAACAGCG
TTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAACGGAG
ATGCGATGGAGCTTTCATAGATGGCTGCTCCAATTTCTACCGTCGCGGAG
ACCAAGGAGCTCCGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCG
AGGACTCGGTGTCGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAG
GGCTGGTGGGCCAGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAA
ATGGTCAAGGAAGGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCC
TCCTAGCACTGGTAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCG
GATCCGATGTTCCCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATG
GAGATGTCCAAGACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGG
CGTTCGTATCAAGGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAA
TCCAAATCGACCGCAGTGTTACTGGTGGAAACAAACAAGGCAAGCTCACC
ATCAAGACGACCGACATGGAAACGATCTACGACATGGGAACAAAGATGAT
CGACTCAATGACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTG
ACAAATCCTCGGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCG
CGCGACTATGATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGA
GGGTGAACTCCAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATG
AGATCGATGTGATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCT
GGAGATACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAA
GGTGGCGGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCC
TTTTCATTGATGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATC
AACCGCGCTCTGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAA
CCGGGGCCACGCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCC
TTCCCCTGGATTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTAC
TCTGCCGATGAGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGA
GATCGACCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGG
AGTCGAATCTACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTC
AGCCAAAAGCGTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAG
TTACCGGCTGTTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACAT
ACGAACAGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCT
ACAAACGGAGATGCGATGGAGCTTTCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003678 | DNA helicase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR010339 |
| DBxref | InterPro:IPR041048 |
| DBxref | InterPro:IPR042487 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF17856 |
| DBxref | PFAM:PF06068 |
| Product | RuvB-like protein 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2253394..2254922 + |
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