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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:135959..136792+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4000-T1 ID=CAN33_4000-T1|Name=CAN33_4000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=834bp|location=Sequence derived from alignment at NKJJ01000019.1:135959..136792+ (Aspergillus niger FDAARGOS_311)
ATGCATCGGTCTTCCAATTACTCATACCAACAAACCTCGAGCTCGAGGAG
CTCCAATCATGGAACCAGCAGCGCGTTCAGCCCCAATGCCAACCCCAACG
AGGACTGGACCAAGATCTCAGACCTTGCAGAGCGTCGCCGGATACAGAAT
CGCATTGCTCAGAGAAACTACCGTAAGTTATCTTCCCTGCAGGGTGTTTA
GCTATGCTGCGACTCGAAGCTCACTGAATGCGACAATCCAGGCAAGAAGC
TAAAGCGTCGCCTCGAAGACTTGGAGAAGAGAGCCGCAACTGCTTCGACA
TCTCCAGAACGGTCACACGAGGGCTCGGAGTCGCCGAAGGCCGTGGTGCA
CACTGTCAAGTCCCGCACCAAACAGGCTCGCACAACCAAGTCTAGCTCAG
ATGCAAACCGTCACACCTCCGCGCAACGAGGCTCTTCCTATGACAGCCAC
TCCACCCAGGAAGATCGCCTATCGATGTTTTCCCAGCAATGCACCCGACA
GCTCTCAGCCTCGCCGCCTCCCGTGTTCTCTTACCCCTCATACTCCCACT
TGGAATCCTATGGTCACCACTCGTACGGACAGCCACCTTCCTATCACTCT
CTCAACAACCACTACAATGACCTCCCATATGGAGAGTACGGAACAACGCT
GCCTTCGATCCTGCCTGGTCCGATACTCGGATCGGGCGCAAAGAAGCACC
ACTCGTACGCCGATGACGAGATTGTCAGCCCCTTCAGTATGAGCTATGCA
TCCATGGCTGGCATTGATCTGGGCCCGACGCCGCAACACCTTCCAGAGCA
CAACATTCCTGTACATGCCCCTCTCTCTACGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:135959..136792+ >CAN33_4000-T1 ID=CAN33_4000-T1|Name=CAN33_4000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1530bp|location=Sequence derived from alignment at NKJJ01000019.1:135959..136792+ (Aspergillus niger FDAARGOS_311)
ATGCATCGGTCTTCCAATTACTCATACCAACAAACCTCGAGCTCGAGGAG
CTCCAATCATGGAACCAGCAGCGCGTTCAGCCCCAATGCCAACCCCAACG
AGGACTGGACCAAGATCTCAGACCTTGCAGAGCGTCGCCGGATACAGAAT
CGCATTGCTCAGAGAAACTACCGCAAGAAGCTAAAGCGTCGCCTCGAAGA
CTTGGAGAAGAGAGCCGCAACTGCTTCGACATCTCCAGAACGGTCACACG
AGGGCTCGGAGTCGCCGAAGGCCGTGGTGCACACTGTCAAGTCCCGCACC
AAACAGGCTCGCACAACCAAGTCTAGCTCAGATGCAAACCGTCACACCTC
CGCGCAACGAGGCTCTTCCTATGACAGCCACTCCACCCAGGAAGATCGCC
TATCGATGTTTTCCCAGCAATGCACCCGACAGCTCTCAGCCTCGCCGCCT
CCCGTGTTCTCTTACCCCTCATACTCCCACTTGGAATCCTATGGTCACCA
CTCGTACGGACAGCCACCTTCCTATCACTCTCTCAACAACCACTACAATG
ACCTCCCATATGGAGAGTACGGAACAACGCTGCCTTCGATCCTGCCTGGT
CCGATACTCGGATCGGGCGCAAAGAAGCACCACTCGTACGCCGATGACGA
GATTGTCAGCCCCTTCAGTATGAGCTATGCATCCATGGCTGGCATTGATC
TGGGCCCGACGCCGCAACACCTTCCAGAGCACAACATTCCTGTACATGCC
CCTCTCTCTACGTGAATGCATCGGTCTTCCAATTACTCATACCAACAAAC
CTCGAGCTCGAGGAGCTCCAATCATGGAACCAGCAGCGCGTTCAGCCCCA
ATGCCAACCCCAACGAGGACTGGACCAAGATCTCAGACCTTGCAGAGCGT
CGCCGGATACAGAATCGCATTGCTCAGAGAAACTACCGCAAGAAGCTAAA
GCGTCGCCTCGAAGACTTGGAGAAGAGAGCCGCAACTGCTTCGACATCTC
CAGAACGGTCACACGAGGGCTCGGAGTCGCCGAAGGCCGTGGTGCACACT
GTCAAGTCCCGCACCAAACAGGCTCGCACAACCAAGTCTAGCTCAGATGC
AAACCGTCACACCTCCGCGCAACGAGGCTCTTCCTATGACAGCCACTCCA
CCCAGGAAGATCGCCTATCGATGTTTTCCCAGCAATGCACCCGACAGCTC
TCAGCCTCGCCGCCTCCCGTGTTCTCTTACCCCTCATACTCCCACTTGGA
ATCCTATGGTCACCACTCGTACGGACAGCCACCTTCCTATCACTCTCTCA
ACAACCACTACAATGACCTCCCATATGGAGAGTACGGAACAACGCTGCCT
TCGATCCTGCCTGGTCCGATACTCGGATCGGGCGCAAAGAAGCACCACTC
GTACGCCGATGACGAGATTGTCAGCCCCTTCAGTATGAGCTATGCATCCA
TGGCTGGCATTGATCTGGGCCCGACGCCGCAACACCTTCCAGAGCACAAC
ATTCCTGTACATGCCCCTCTCTCTACGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR004827 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:135959..136792 + |
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