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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2512066..2513961- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40175-T1 ID=CAN33_40175-T1|Name=CAN33_40175-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1896bp|location=Sequence derived from alignment at NKJJ01000017.1:2512066..2513961- (Aspergillus niger FDAARGOS_311)
ATGACACTAGCGGGTGCTTCATATGGTATGTTTGAGACGCAGCTCAGTAC
ATACTCGTGAATCTCTTTACACTGTAAATAAGGCCGGTATCCCTGCTGTC
ACCGTTGCGGTGTTGACATGTCCTAATCGAGCTTTACATTAATTTGTGTA
TCACGTGATCATGGCGCGTGTCCGCCGCGTTTCGCGTCCGTCGCGCGATA
GGCCATCCAGCATGTGTTGCAGAACTGCAGCGGATCAAGCAACGGCTGAG
CATCTCAATAGCGTTCATATCGCTGTTGGAAAAAAAACAAGATGATCCGG
CAAGACTTCCGCAGAATTGACCCGAAGAGAAGGGCAACCCTCGACCACAA
AAAGAAACAATTCGCGACCCCGGTCTTCAAGCAACAGGACTATCCGCATC
GCTTAAACTTCTATGAGGTCCCCCGACCGACGAGATCACTCTCGAACAAT
TTGAGCAATGGGCTATTGATCGATTGAAAGGTTACTTAATCTCCGATCTT
AGTGTATCATATATACTCACAATGTTCGACAGTCTTGGCTGAGATTGAAG
CCTGTTCTTATCGAAACAAGTCGCCGGCAGAGACCGAAGCGCATATCACT
CCTCACCTCCAGAAATATCTCCCTCTATCCTCCAACACATCCTCCTCTAA
CGGCGCTGCGGATCAACGATTGAAGAATGAACGCCAGAAAGATCACTATT
CTCACTTTATTCTACGCCTGGCATTCTCGGCCACAGAGGAACTCCGTCGG
CGTTTCGTGAGAGCAGAGACTATGCTTTTCAGGTTCCGCTTCCAACGCGA
CGACACCAGAGAACGACGCGCCTTCATCGAGAGCCTTAATCTGGACTGGG
AGCCTGTGGATGATGAGGAAAAACAGAGACTGGCGGAACAATTACTCGCC
GCTTCCCCGGGTCTACGTCGCATTGATGATGAGACCTGGTACAAGGTGGA
CTGGGAGAAAGTCCCGGAGTTGGTAGAGAGACGGGCTGTTTTCCTATCCA
AGGGGAAAGCATATGTGCCCGGTAGGGAGCAATTGAGCATGATCATAGCA
GAATTTACGGCTCGATTGGAGCGCGCTCTTGAGGTATGTCAGAGCAGTAG
ATATGGACTGTTTTATGGTACTGACATCTCCCAGCTCACAAGTCGGGCGT
TGCCGCGCTTGGATGAAGATGATCGCCTCACTCCAATTTTGAATCACCTC
TCGAAGAACTTTGGAAGTGCCGAGTCGGTATACACGGAAAACGAGGGATT
TGTTGATGGCGCCCCGATCACTGCGAACAACATTGATCGACTATCTCAGC
ATTTCCCACTATGCATGCGCAGTCTTCACATGAACCTACGCAAGAACAAC
CACTTGAAGCACTACGGACGACTGCAATATACCCTCTTCCTCAAAGGAAT
TGGGCTGTCGCTGGAAGAGTGCATTGTTTTCTGGCGCCAAGGCTTCAAAG
GGCTCACTGACGACGAATTCAACTCGCGGTACAAGTACAATATCCGCCAC
GCTTACGGCGATGTGGGCGGTGATCAGAACCGCAGAGGCCGGGGATACCC
TCCGTACTCCTGCCAGAAGATCTTGGGTGACTCGAATCCGGGAGTCGGAC
AGACCCATGGCTGTCCGTACCGCCACTTCTCTGTCGATAACTTGATCGGT
CTTCTTCAGTCCACAGGAGTCAATGACAGAGACGTCCTACGTGGAGTGCG
AGAGGATGTTGAGAAGATGCGTTTCCATATTGCTTGCAACAGGGTCTTCG
AACATACCCACAAAGCAGATATCAAGAGAGTGAAGGAAGACGGTACATGG
AACCAAACTGACCTCGACACCATCGTGCACCCCAATACCTACTTCAAGCG
CAGCTATCTCTTGAAGCAAATGGGGAAGGCACCAAAGAATGCCTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2512066..2513961- >CAN33_40175-T1 ID=CAN33_40175-T1|Name=CAN33_40175-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4014bp|location=Sequence derived from alignment at NKJJ01000017.1:2512066..2513961- (Aspergillus niger FDAARGOS_311)
CTCACAAGTCGGGCGTTGCCGCGCTTGGATGAAGATGATCGCCTCACTCC
AATTTTGAATCACCTCTCGAAGAACTTTGGAAGTGCCGAGTCGGTATACA
CGGAAAACGAGGGATTTGTTGATGGCGCCCCGATCACTGCGAACAACATT
GATCGACTATCTCAGCATTTCCCACTATGCATGCGCAGTCTTCACATGAA
CCTACGCAAGAACAACCACTTGAAGCACTACGGACGACTGCAATATACCC
TCTTCCTCAAAGGAATTGGGCTGTCGCTGGAAGAGTGCATTGTTTTCTGG
CGCCAAGGCTTCAAAGGGCTCACTGACGACGAATTCAACTCGCGGTACAA
GTACAATATCCGCCACGCTTACGGCGATGTGGGCGGTGATCAGAACCGCA
GAGGCCGGGGATACCCTCCGTACTCCTGCCAGAAGATCTTGGGTGACTCG
AATCCGGGAGTCGGACAGACCCATGGCTGTCCGTACCGCCACTTCTCTGT
CGATAACTTGATCGGTCTTCTTCAGTCCACAGGAGTCAATGACAGAGACG
TCCTACGTGGAGTGCGAGAGGATGTTGAGAAGATGCGTTTCCATATTGCT
TGCAACAGGGTCTTCGAACATACCCACAAAGCAGATATCAAGAGAGTGAA
GGAAGACGGTACATGGAACCAAACTGACCTCGACACCATCGTGCACCCCA
ATACCTACTTCAAGCGCAGCTATCTCTTGAAGCAAATGGGGAAGGCACCA
AAGAATGCCTAATCTTGGCTGAGATTGAAGCCTGTTCTTATCGAAACAAG
TCGCCGGCAGAGACCGAAGCGCATATCACTCCTCACCTCCAGAAATATCT
CCCTCTATCCTCCAACACATCCTCCTCTAACGGCGCTGCGGATCAACGAT
TGAAGAATGAACGCCAGAAAGATCACTATTCTCACTTTATTCTACGCCTG
GCATTCTCGGCCACAGAGGAACTCCGTCGGCGTTTCGTGAGAGCAGAGAC
TATGCTTTTCAGGTTCCGCTTCCAACGCGACGACACCAGAGAACGACGCG
CCTTCATCGAGAGCCTTAATCTGGACTGGGAGCCTGTGGATGATGAGGAA
AAACAGAGACTGGCGGAACAATTACTCGCCGCTTCCCCGGGTCTACGTCG
CATTGATGATGAGACCTGGTACAAGGTGGACTGGGAGAAAGTCCCGGAGT
TGGTAGAGAGACGGGCTGTTTTCCTATCCAAGGGGAAAGCATATGTGCCC
GGTAGGGAGCAATTGAGCATGATCATAGCAGAATTTACGGCTCGATTGGA
GCGCGCTCTTGAGATGACACTAGCGGGTGCTTCATATGCTCACAAGTCGG
GCGTTGCCGCGCTTGGATGAAGATGATCGCCTCACTCCAATTTTGAATCA
CCTCTCGAAGAACTTTGGAAGTGCCGAGTCGGTATACACGGAAAACGAGG
GATTTGTTGATGGCGCCCCGATCACTGCGAACAACATTGATCGACTATCT
CAGCATTTCCCACTATGCATGCGCAGTCTTCACATGAACCTACGCAAGAA
CAACCACTTGAAGCACTACGGACGACTGCAATATACCCTCTTCCTCAAAG
GAATTGGGCTGTCGCTGGAAGAGTGCATTGTTTTCTGGCGCCAAGGCTTC
AAAGGGCTCACTGACGACGAATTCAACTCGCGGTACAAGTACAATATCCG
CCACGCTTACGGCGATGTGGGCGGTGATCAGAACCGCAGAGGCCGGGGAT
ACCCTCCGTACTCCTGCCAGAAGATCTTGGGTGACTCGAATCCGGGAGTC
GGACAGACCCATGGCTGTCCGTACCGCCACTTCTCTGTCGATAACTTGAT
CGGTCTTCTTCAGTCCACAGGAGTCAATGACAGAGACGTCCTACGTGGAG
TGCGAGAGGATGTTGAGAAGATGCGTTTCCATATTGCTTGCAACAGGGTC
TTCGAACATACCCACAAAGCAGATATCAAGAGAGTGAAGGAAGACGGTAC
ATGGAACCAAACTGACCTCGACACCATCGTGCACCCCAATACCTACTTCA
AGCGCAGCTATCTCTTGAAGCAAATGGGGAAGGCACCAAAGAATGCCTAA
TCTTGGCTGAGATTGAAGCCTGTTCTTATCGAAACAAGTCGCCGGCAGAG
ACCGAAGCGCATATCACTCCTCACCTCCAGAAATATCTCCCTCTATCCTC
CAACACATCCTCCTCTAACGGCGCTGCGGATCAACGATTGAAGAATGAAC
GCCAGAAAGATCACTATTCTCACTTTATTCTACGCCTGGCATTCTCGGCC
ACAGAGGAACTCCGTCGGCGTTTCGTGAGAGCAGAGACTATGCTTTTCAG
GTTCCGCTTCCAACGCGACGACACCAGAGAACGACGCGCCTTCATCGAGA
GCCTTAATCTGGACTGGGAGCCTGTGGATGATGAGGAAAAACAGAGACTG
GCGGAACAATTACTCGCCGCTTCCCCGGGTCTACGTCGCATTGATGATGA
GACCTGGTACAAGGTGGACTGGGAGAAAGTCCCGGAGTTGGTAGAGAGAC
GGGCTGTTTTCCTATCCAAGGGGAAAGCATATGTGCCCGGTAGGGAGCAA
TTGAGCATGATCATAGCAGAATTTACGGCTCGATTGGAGCGCGCTCTTGA
GATGACACTAGCGGGTGCTTCATATGCTCACAAGTCGGGCGTTGCCGCGC
TTGGATGAAGATGATCGCCTCACTCCAATTTTGAATCACCTCTCGAAGAA
CTTTGGAAGTGCCGAGTCGGTATACACGGAAAACGAGGGATTTGTTGATG
GCGCCCCGATCACTGCGAACAACATTGATCGACTATCTCAGCATTTCCCA
CTATGCATGCGCAGTCTTCACATGAACCTACGCAAGAACAACCACTTGAA
GCACTACGGACGACTGCAATATACCCTCTTCCTCAAAGGAATTGGGCTGT
CGCTGGAAGAGTGCATTGTTTTCTGGCGCCAAGGCTTCAAAGGGCTCACT
GACGACGAATTCAACTCGCGGTACAAGTACAATATCCGCCACGCTTACGG
CGATGTGGGCGGTGATCAGAACCGCAGAGGCCGGGGATACCCTCCGTACT
CCTGCCAGAAGATCTTGGGTGACTCGAATCCGGGAGTCGGACAGACCCAT
GGCTGTCCGTACCGCCACTTCTCTGTCGATAACTTGATCGGTCTTCTTCA
GTCCACAGGAGTCAATGACAGAGACGTCCTACGTGGAGTGCGAGAGGATG
TTGAGAAGATGCGTTTCCATATTGCTTGCAACAGGGTCTTCGAACATACC
CACAAAGCAGATATCAAGAGAGTGAAGGAAGACGGTACATGGAACCAAAC
TGACCTCGACACCATCGTGCACCCCAATACCTACTTCAAGCGCAGCTATC
TCTTGAAGCAAATGGGGAAGGCACCAAAGAATGCCTAATCTTGGCTGAGA
TTGAAGCCTGTTCTTATCGAAACAAGTCGCCGGCAGAGACCGAAGCGCAT
ATCACTCCTCACCTCCAGAAATATCTCCCTCTATCCTCCAACACATCCTC
CTCTAACGGCGCTGCGGATCAACGATTGAAGAATGAACGCCAGAAAGATC
ACTATTCTCACTTTATTCTACGCCTGGCATTCTCGGCCACAGAGGAACTC
CGTCGGCGTTTCGTGAGAGCAGAGACTATGCTTTTCAGGTTCCGCTTCCA
ACGCGACGACACCAGAGAACGACGCGCCTTCATCGAGAGCCTTAATCTGG
ACTGGGAGCCTGTGGATGATGAGGAAAAACAGAGACTGGCGGAACAATTA
CTCGCCGCTTCCCCGGGTCTACGTCGCATTGATGATGAGACCTGGTACAA
GGTGGACTGGGAGAAAGTCCCGGAGTTGGTAGAGAGACGGGCTGTTTTCC
TATCCAAGGGGAAAGCATATGTGCCCGGTAGGGAGCAATTGAGCATGATC
ATAGCAGAATTTACGGCTCGATTGGAGCGCGCTCTTGAGATGACACTAGC
GGGTGCTTCATATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006269 | DNA replication, synthesis of RNA primer |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003896 | DNA primase activity |
| GO:0016779 | nucleotidyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007238 |
| DBxref | InterPro:IPR016558 |
| DBxref | PFAM:PF04104 |
| Product | Eukaryotic and archaeal DNA primase large subunit family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2512066..2513961 - |
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