You are here

Home

CAN33_4050-T1, CAN33_4050-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4050-T1
Unique NameCAN33_4050-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:165890..167450-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4050-T1 ID=CAN33_4050-T1|Name=CAN33_4050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1561bp|location=Sequence derived from alignment at NKJJ01000019.1:165890..167450- (Aspergillus niger FDAARGOS_311)
ATGGCCAGAGACGCATCGTCGCCGGCCTCGCAGTCGGCCCCGGAGCTCAA
TGCCCGCATTTCCACCTCCAGCGGACACCACCGCCCAGCCGCCAAAGAAA
CCACGTTCCGGGAATGGATGCTCGCCAACCAGATCGGTATGAACCAATCA
TGCAGCTTCCGATAATAATTCAATGTTTGGCCCTGTCAATGCTCTGCAAA
ACAGATGACCAATTCCATGCGAACTGTGAGCGCTAACTAGAACGTTTCCG
TATATAGGTATTTCGTTGACCACTCTTTCGATGCTACTGGCCGTTCACCA
CCTCTACCCTTCTTTGAATCCCTACACCGCCCCGTTTTTCCAGCTGTCGT
ACTACCAGCCCACCACTGGAGATTATGTGCAAGGATGGGATGACATCTAC
TTTATCGCCAGCTCCGCGATTGCTTTCATCGCTATCCGGGCAATTGTTAT
CGACTGGATTCTCCAGCCACTGGCGCAAAGCTGCGGATTGAAACGGAAGG
CCTCGGTTCGTCTGGCTGAGCAAGGCTGGCTCTGCTTGTATTATGGATTC
TTCTGGTCCCTTGGCATGGTTCGTACTACTTAACATTGCGCTTACATGAT
TGGGCGTGCTGACCGTGGGGATGTAGTACATTTGGTCCAACTCATACTAT
TGGGGCGACTTCAGCGCCATCTGGGATCAGTGGCCCGCACGCAATGTGTC
GGGGTTGATGAAATGGTACCTTTTGGTGCAATTGGCCTTCTGGGTGCAGA
TGCTCCTGGTTATCAACATTGAGGAGCGCCGGAAAGACCACTACCAGATG
CTAACTCACCACGTCATCACCATCACTCTCTTCGGATCGGCTTATATCTA
TGGCTTCTACAATGTATCCAACGTGGTACTGTCGCTCATGGACATTGTGG
ACCTCTTGCTACCGGTAAGTAGGAATTCAGCCTTAGAATTGGAAACGTGA
GCTAATTCGAAGACCAGGCGGCCAAAGTCCTCAAATACTTAAAGTACGAG
ACCACCTGCAATGTCGCTTTTGGTGTGTTCATGGTTACGTGGCTCATAAC
GCGCCATATCTACTACCCGCAACTGTGCTGGTCCATCTACAAGGACGTCC
CAGCCAAGATGGCGTACGGCTGCTACTCCGGTACCACTGCGGAAATGACT
TCCACCAATGCGTATCCCAACCGCTGGCGGTATCTGCTTTACCCCTTCCA
GGACATCAGCGGCCCAATCTGCATGAACCGCACCATCAAGTGGATCTTCC
TTTCCTGCCTTTTGGCACTGCAGGCACTCTCGCTCATCTGGTTCACCATG
GTCATCCGGGTCGCCGTCGGAGTCATCCGCACCGGAAATGCTGAAGAGCC
TCGCAGCGACGACGAAGAGGAGGAGGAAGATGTTGCGGGCAAGGATGGCC
CCAATGGTACAGCTGTCCCGACCGACGGCTCCAGTGCTGACTGGCGCCGC
GCCAATGGGTCTTCGAATGTACGGCCCCGTGGACGCGGCCGTGTTCGTCT
TGGCGACCAGAGTGACCACAAAGCGTTACTCGGGCGGATCGGATGTGATA
AACCGACCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000019.1:165890..167450-

>CAN33_4050-T1 ID=CAN33_4050-T1|Name=CAN33_4050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5316bp|location=Sequence derived from alignment at NKJJ01000019.1:165890..167450- (Aspergillus niger FDAARGOS_311)
GCGGCCAAAGTCCTCAAATACTTAAAGTACGAGACCACCTGCAATGTCGC
TTTTGGTGTGTTCATGGTTACGTGGCTCATAACGCGCCATATCTACTACC
CGCAACTGTGCTGGTCCATCTACAAGGACGTCCCAGCCAAGATGGCGTAC
GGCTGCTACTCCGGTACCACTGCGGAAATGACTTCCACCAATGCGTATCC
CAACCGCTGGCGGTATCTGCTTTACCCCTTCCAGGACATCAGCGGCCCAA
TCTGCATGAACCGCACCATCAAGTGGATCTTCCTTTCCTGCCTTTTGGCA
CTGCAGGCACTCTCGCTCATCTGGTTCACCATGGTCATCCGGGTCGCCGT
CGGAGTCATCCGCACCGGAAATGCTGAAGAGCCTCGCAGCGACGACGAAG
AGGAGGAGGAAGATGTTGCGGGCAAGGATGGCCCCAATGGTACAGCTGTC
CCGACCGACGGCTCCAGTGCTGACTGGCGCCGCGCCAATGGGTCTTCGAA
TGTACGGCCCCGTGGACGCGGCCGTGTTCGTCTTGGCGACCAGAGTGACC
ACAAAGCGTTACTCGGGCGGATCGGATGTGATAAACCGACCTAGTACATT
TGGTCCAACTCATACTATTGGGGCGACTTCAGCGCCATCTGGGATCAGTG
GCCCGCACGCAATGTGTCGGGGTTGATGAAATGGTACCTTTTGGTGCAAT
TGGCCTTCTGGGTGCAGATGCTCCTGGTTATCAACATTGAGGAGCGCCGG
AAAGACCACTACCAGATGCTAACTCACCACGTCATCACCATCACTCTCTT
CGGATCGGCTTATATCTATGGCTTCTACAATGTATCCAACGTGGTACTGT
CGCTCATGGACATTGTGGACCTCTTGCTACCGGTATTTCGTTGACCACTC
TTTCGATGCTACTGGCCGTTCACCACCTCTACCCTTCTTTGAATCCCTAC
ACCGCCCCGTTTTTCCAGCTGTCGTACTACCAGCCCACCACTGGAGATTA
TGTGCAAGGATGGGATGACATCTACTTTATCGCCAGCTCCGCGATTGCTT
TCATCGCTATCCGGGCAATTGTTATCGACTGGATTCTCCAGCCACTGGCG
CAAAGCTGCGGATTGAAACGGAAGGCCTCGGTTCGTCTGGCTGAGCAAGG
CTGGCTCTGCTTGTATTATGGATTCTTCTGGTCCCTTGGCATGATGGCCA
GAGACGCATCGTCGCCGGCCTCGCAGTCGGCCCCGGAGCTCAATGCCCGC
ATTTCCACCTCCAGCGGACACCACCGCCCAGCCGCCAAAGAAACCACGTT
CCGGGAATGGATGCTCGCCAACCAGATCGGCGGCCAAAGTCCTCAAATAC
TTAAAGTACGAGACCACCTGCAATGTCGCTTTTGGTGTGTTCATGGTTAC
GTGGCTCATAACGCGCCATATCTACTACCCGCAACTGTGCTGGTCCATCT
ACAAGGACGTCCCAGCCAAGATGGCGTACGGCTGCTACTCCGGTACCACT
GCGGAAATGACTTCCACCAATGCGTATCCCAACCGCTGGCGGTATCTGCT
TTACCCCTTCCAGGACATCAGCGGCCCAATCTGCATGAACCGCACCATCA
AGTGGATCTTCCTTTCCTGCCTTTTGGCACTGCAGGCACTCTCGCTCATC
TGGTTCACCATGGTCATCCGGGTCGCCGTCGGAGTCATCCGCACCGGAAA
TGCTGAAGAGCCTCGCAGCGACGACGAAGAGGAGGAGGAAGATGTTGCGG
GCAAGGATGGCCCCAATGGTACAGCTGTCCCGACCGACGGCTCCAGTGCT
GACTGGCGCCGCGCCAATGGGTCTTCGAATGTACGGCCCCGTGGACGCGG
CCGTGTTCGTCTTGGCGACCAGAGTGACCACAAAGCGTTACTCGGGCGGA
TCGGATGTGATAAACCGACCTAGTACATTTGGTCCAACTCATACTATTGG
GGCGACTTCAGCGCCATCTGGGATCAGTGGCCCGCACGCAATGTGTCGGG
GTTGATGAAATGGTACCTTTTGGTGCAATTGGCCTTCTGGGTGCAGATGC
TCCTGGTTATCAACATTGAGGAGCGCCGGAAAGACCACTACCAGATGCTA
ACTCACCACGTCATCACCATCACTCTCTTCGGATCGGCTTATATCTATGG
CTTCTACAATGTATCCAACGTGGTACTGTCGCTCATGGACATTGTGGACC
TCTTGCTACCGGTATTTCGTTGACCACTCTTTCGATGCTACTGGCCGTTC
ACCACCTCTACCCTTCTTTGAATCCCTACACCGCCCCGTTTTTCCAGCTG
TCGTACTACCAGCCCACCACTGGAGATTATGTGCAAGGATGGGATGACAT
CTACTTTATCGCCAGCTCCGCGATTGCTTTCATCGCTATCCGGGCAATTG
TTATCGACTGGATTCTCCAGCCACTGGCGCAAAGCTGCGGATTGAAACGG
AAGGCCTCGGTTCGTCTGGCTGAGCAAGGCTGGCTCTGCTTGTATTATGG
ATTCTTCTGGTCCCTTGGCATGATGGCCAGAGACGCATCGTCGCCGGCCT
CGCAGTCGGCCCCGGAGCTCAATGCCCGCATTTCCACCTCCAGCGGACAC
CACCGCCCAGCCGCCAAAGAAACCACGTTCCGGGAATGGATGCTCGCCAA
CCAGATCGGCGGCCAAAGTCCTCAAATACTTAAAGTACGAGACCACCTGC
AATGTCGCTTTTGGTGTGTTCATGGTTACGTGGCTCATAACGCGCCATAT
CTACTACCCGCAACTGTGCTGGTCCATCTACAAGGACGTCCCAGCCAAGA
TGGCGTACGGCTGCTACTCCGGTACCACTGCGGAAATGACTTCCACCAAT
GCGTATCCCAACCGCTGGCGGTATCTGCTTTACCCCTTCCAGGACATCAG
CGGCCCAATCTGCATGAACCGCACCATCAAGTGGATCTTCCTTTCCTGCC
TTTTGGCACTGCAGGCACTCTCGCTCATCTGGTTCACCATGGTCATCCGG
GTCGCCGTCGGAGTCATCCGCACCGGAAATGCTGAAGAGCCTCGCAGCGA
CGACGAAGAGGAGGAGGAAGATGTTGCGGGCAAGGATGGCCCCAATGGTA
CAGCTGTCCCGACCGACGGCTCCAGTGCTGACTGGCGCCGCGCCAATGGG
TCTTCGAATGTACGGCCCCGTGGACGCGGCCGTGTTCGTCTTGGCGACCA
GAGTGACCACAAAGCGTTACTCGGGCGGATCGGATGTGATAAACCGACCT
AGTACATTTGGTCCAACTCATACTATTGGGGCGACTTCAGCGCCATCTGG
GATCAGTGGCCCGCACGCAATGTGTCGGGGTTGATGAAATGGTACCTTTT
GGTGCAATTGGCCTTCTGGGTGCAGATGCTCCTGGTTATCAACATTGAGG
AGCGCCGGAAAGACCACTACCAGATGCTAACTCACCACGTCATCACCATC
ACTCTCTTCGGATCGGCTTATATCTATGGCTTCTACAATGTATCCAACGT
GGTACTGTCGCTCATGGACATTGTGGACCTCTTGCTACCGGTATTTCGTT
GACCACTCTTTCGATGCTACTGGCCGTTCACCACCTCTACCCTTCTTTGA
ATCCCTACACCGCCCCGTTTTTCCAGCTGTCGTACTACCAGCCCACCACT
GGAGATTATGTGCAAGGATGGGATGACATCTACTTTATCGCCAGCTCCGC
GATTGCTTTCATCGCTATCCGGGCAATTGTTATCGACTGGATTCTCCAGC
CACTGGCGCAAAGCTGCGGATTGAAACGGAAGGCCTCGGTTCGTCTGGCT
GAGCAAGGCTGGCTCTGCTTGTATTATGGATTCTTCTGGTCCCTTGGCAT
GATGGCCAGAGACGCATCGTCGCCGGCCTCGCAGTCGGCCCCGGAGCTCA
ATGCCCGCATTTCCACCTCCAGCGGACACCACCGCCCAGCCGCCAAAGAA
ACCACGTTCCGGGAATGGATGCTCGCCAACCAGATCGGCGGCCAAAGTCC
TCAAATACTTAAAGTACGAGACCACCTGCAATGTCGCTTTTGGTGTGTTC
ATGGTTACGTGGCTCATAACGCGCCATATCTACTACCCGCAACTGTGCTG
GTCCATCTACAAGGACGTCCCAGCCAAGATGGCGTACGGCTGCTACTCCG
GTACCACTGCGGAAATGACTTCCACCAATGCGTATCCCAACCGCTGGCGG
TATCTGCTTTACCCCTTCCAGGACATCAGCGGCCCAATCTGCATGAACCG
CACCATCAAGTGGATCTTCCTTTCCTGCCTTTTGGCACTGCAGGCACTCT
CGCTCATCTGGTTCACCATGGTCATCCGGGTCGCCGTCGGAGTCATCCGC
ACCGGAAATGCTGAAGAGCCTCGCAGCGACGACGAAGAGGAGGAGGAAGA
TGTTGCGGGCAAGGATGGCCCCAATGGTACAGCTGTCCCGACCGACGGCT
CCAGTGCTGACTGGCGCCGCGCCAATGGGTCTTCGAATGTACGGCCCCGT
GGACGCGGCCGTGTTCGTCTTGGCGACCAGAGTGACCACAAAGCGTTACT
CGGGCGGATCGGATGTGATAAACCGACCTAGTACATTTGGTCCAACTCAT
ACTATTGGGGCGACTTCAGCGCCATCTGGGATCAGTGGCCCGCACGCAAT
GTGTCGGGGTTGATGAAATGGTACCTTTTGGTGCAATTGGCCTTCTGGGT
GCAGATGCTCCTGGTTATCAACATTGAGGAGCGCCGGAAAGACCACTACC
AGATGCTAACTCACCACGTCATCACCATCACTCTCTTCGGATCGGCTTAT
ATCTATGGCTTCTACAATGTATCCAACGTGGTACTGTCGCTCATGGACAT
TGTGGACCTCTTGCTACCGGTATTTCGTTGACCACTCTTTCGATGCTACT
GGCCGTTCACCACCTCTACCCTTCTTTGAATCCCTACACCGCCCCGTTTT
TCCAGCTGTCGTACTACCAGCCCACCACTGGAGATTATGTGCAAGGATGG
GATGACATCTACTTTATCGCCAGCTCCGCGATTGCTTTCATCGCTATCCG
GGCAATTGTTATCGACTGGATTCTCCAGCCACTGGCGCAAAGCTGCGGAT
TGAAACGGAAGGCCTCGGTTCGTCTGGCTGAGCAAGGCTGGCTCTGCTTG
TATTATGGATTCTTCTGGTCCCTTGGCATGATGGCCAGAGACGCATCGTC
GCCGGCCTCGCAGTCGGCCCCGGAGCTCAATGCCCGCATTTCCACCTCCA
GCGGACACCACCGCCCAGCCGCCAAAGAAACCACGTTCCGGGAATGGATG
CTCGCCAACCAGATCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4050CAN33_4050Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4050-T1CAN33_4050-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4050-T1.cdsCAN33_4050-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4050-T1.exon4CAN33_4050-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_4050-T1.exon3CAN33_4050-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4050-T1.exon2CAN33_4050-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4050-T1.exon1CAN33_4050-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013599
DBxrefInterPro:IPR016439
DBxrefInterPro:IPR006634
DBxrefPFAM:PF03798
DBxrefPFAM:PF08390
ProductTLC domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:165890..167450 -
Powered by Drupal