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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:2815751..2816892- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_40620-T1 ID=CAN33_40620-T1|Name=CAN33_40620-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1142bp|location=Sequence derived from alignment at NKJJ01000017.1:2815751..2816892- (Aspergillus niger FDAARGOS_311)
ATGTCTGTCAGCTCAGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAG
CGTCAGATTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGA
TCGCCAAACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCA
CGTTTGCCTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAA
GCCTCACCAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGT
CCAGCAAGCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGAT
GTAAGACTCCCCGTGGCACACCAGCACGAAGATCCCAACGAACGAACAAG
CATCTGACCCTTGTATGCGGAACCCAACAGGCATTGAAGTTCATCCCTAA
CCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTCCTCGAATACCTGT
CTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCCCTTGGCAGCAAGC
CTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACGGGCCTGACTTCAT
CACCGTAACTAAGGCGACCGACTCCAACTGGGCGCACATCAAGCCCGAAA
TCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGAGGCGATCGTGAAC
ACCGTCGCCAAGACTGGTGAGAGTGGCCAGGAAGGTGGCGAGTCGGAGTC
CCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGCATGATCAAGGAGC
TTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGACGGTGGCGACATT
GAGTTCCGTGGCTTTGAGAACGGCATTGTCTTGTTGAAGCTGCGCGGTGC
TTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGTAACGGTATTGAGT
CTATGCTTATGCATTATGTGAGTATCACACTACCTGCATGCATCTTGACA
ATAAAGTTTGACTAATTGTGTGTTTTTAACCTACAGATCGAAGAAGTCCA
AGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGT
TCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACT
GCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:2815751..2816892- >CAN33_40620-T1 ID=CAN33_40620-T1|Name=CAN33_40620-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2979bp|location=Sequence derived from alignment at NKJJ01000017.1:2815751..2816892- (Aspergillus niger FDAARGOS_311)
ATCGAAGAAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGAT
TTCGATGCACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGG
GCGCTGCCGCTACTGCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCA
CCTTGAGCATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTT
CCCGACCACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTC
CGCACCCCTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACC
TCTGTATTTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTC
CAACTGGGCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCG
TGACATCGGGCGAGGCGATCGTGAACACCGTCGCCAAGACTGGTGAGAGT
GGCCAGGAAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGA
TGAGGTGATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCG
CCATCCAGGAAGACGGTGGCGACATTGAGTTCCGTGGCTTTGAGAACGGC
ATTGTCTTGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCAC
CGTGACGCTGCGTAACGGTATTGAGTCTATGCTTATGCATTATATGTCTG
TCAGCTCAGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGA
TTGACAACGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAA
ACCCGCGGTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGC
CTGCTATCACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCAC
CAGCACTCGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAA
GCGCACGATATTCATTCAGACGGAAAACACACCGAACCCTGATATCGAAG
AAGTCCAAGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATG
CACGAGTTCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGC
CGCTACTGCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAG
CATTGAAGTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACC
ACCTTCCTCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCC
CTCTCCCTTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTAT
TTTACGGGCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAACTGG
GCGCACATCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATC
GGGCGAGGCGATCGTGAACACCGTCGCCAAGACTGGTGAGAGTGGCCAGG
AAGGTGGCGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTG
ATCGGCATGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCA
GGAAGACGGTGGCGACATTGAGTTCCGTGGCTTTGAGAACGGCATTGTCT
TGTTGAAGCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACG
CTGCGTAACGGTATTGAGTCTATGCTTATGCATTATATGTCTGTCAGCTC
AGCGTCTGGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAA
CGCAGCAACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCG
GTGTTCGGATCATACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTAT
CACCGCCTCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACT
CGCTCGTGCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACG
ATATTCATTCAGACGGAAAACACACCGAACCCTGATATCGAAGAAGTCCA
AGGAGTCGAGCAAGTGCTAGACCAAGAAGAGGAGATTTCGATGCACGAGT
TCGCCAAGTTCGAGGAAAAGCTGCGCCAGCAAAAGGGCGCTGCCGCTACT
GCCTCGACGGGCGGCAAGGGAACATTGGATTCGGCACCTTGAGCATTGAA
GTTCATCCCTAACCACCGTGTCCTCCCCGAAAATTTCCCGACCACCTTCC
TCGAATACCTGTCTCCCCGCTCTACCCTCGCTCCTCCGCACCCCTCTCCC
TTGGCAGCAAGCCTGCTCAACGTCGACGGTGTTACCTCTGTATTTTACGG
GCCTGACTTCATCACCGTAACTAAGGCGACCGACTCCAACTGGGCGCACA
TCAAGCCCGAAATCTTCAGTCTCATCACTCAAGCCGTGACATCGGGCGAG
GCGATCGTGAACACCGTCGCCAAGACTGGTGAGAGTGGCCAGGAAGGTGG
CGAGTCGGAGTCCCTGGCCTACGAGGAAGAAGAAGATGAGGTGATCGGCA
TGATCAAGGAGCTTTTGGACACAAGGATTCGGCCCGCCATCCAGGAAGAC
GGTGGCGACATTGAGTTCCGTGGCTTTGAGAACGGCATTGTCTTGTTGAA
GCTGCGCGGTGCTTGCCGGACCTGCGATTCGAGCACCGTGACGCTGCGTA
ACGGTATTGAGTCTATGCTTATGCATTATATGTCTGTCAGCTCAGCGTCT
GGAAACATGCTTAGGCGCACTCTCTTCAGCGTCAGATTGACAACGCAGCA
ACTGAATGCTGCGGAGTGCTCCTCCCGGATCGCCAAACCCGCGGTGTTCG
GATCATACAGGAATGTCCACCGTTCGGCACGTTTGCCTGCTATCACCGCC
TCAGAGGCTCGTCGCCGGCCGACCTTGAAGCCTCACCAGCACTCGCTCGT
GCAGGCTCGCGTGAACGGACCATCGCCGTCCAGCAAGCGCACGATATTCA
TTCAGACGGAAAACACACCGAACCCTGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016226 | iron-sulfur cluster assembly |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0051536 | iron-sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR034904 |
| DBxref | InterPro:IPR035433 |
| DBxref | InterPro:IPR001075 |
| DBxref | InterPro:IPR036498 |
| DBxref | InterPro:IPR014824 |
| DBxref | PFAM:PF01106 |
| DBxref | PFAM:PF08712 |
| Product | Scaffold protein Nfu/NifU N terminal family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:2815751..2816892 - |
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