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CAN33_40695-T1, CAN33_40695-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_40695-T1
Unique NameCAN33_40695-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:2851988..2853861+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_40695-T1 ID=CAN33_40695-T1|Name=CAN33_40695-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1874bp|location=Sequence derived from alignment at NKJJ01000017.1:2851988..2853861+ (Aspergillus niger FDAARGOS_311)
ATGCTTGCAGAGCTTCCTCCAGAGATTATACAGCTTATTACAAGCTATTT
GCCATCTGCCAGCGCGCTTGTGAATCTGTCAAGGACCTGTTGGCGCCTAC
ACCACGTTGTCGCTGCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGAG
ACCAAGTTTCCTGGTGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTCA
GGCACTCACATCTCGCTCTCGAGCATTAGACAAACACGCAGTCGTCGGAA
GATTTGTCGTACCTGCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTCA
ACACGACGTGACAATCCTACTCATGGATATCGCCCTGCTTTGGACTCGTA
TGAAGTCTGGAATAGCTCTTCGTGGAACGACCGGAAGGAGGTGCTCGCCT
GGGGCGCGGCAGATGAACTAGTCCTGCGCATCACTGAGCCTGGCCCCAAT
TCAAAGGGGAAGTGGGTGGTCTTCAATGATCTCGATCACATCAGTAGCCA
TGATGACATCTGTGGTGTCCATATTCTACGTCCTGGACACCCTTCCAAGG
AGCCCCAGACTGAACATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTTC
CATCTCTCTATCGACCCTAACAGCGCCTGCCATATGTACAAGCAGCGGTT
CATGACCTCCGGAGGAGGCATAGAGAGAACAGATATGAGTGACGGAAAGG
ACCCTATCTTATCTGCCCACTTAAGCGACGGATCGATATCTTTCTTCAGC
ACCACTTCTGGAGAGGCGGAAGTCTACCCATTTGCTCGTCTCAATGCCGA
TTCTAGCAACAATGCAACCATCAGCTCTCGCCACAAGTATTCCAAGTTCC
TTTCGCCCTCTCTATTCGCAGTCGGCACAGGACGCATCCACGATGCAATT
ACTATCTCCGCCATCACGCCACAAGGTCTATCACCAAGTCGTGAGCTCAA
TGTGGAGCTGGTAGATTTCGAAAGACTTAATCTCGATACGACCATCAGAT
CCAACGTCAACGCCATTGCTCCACTCGATCCCACCGGACAAGTCTTCCTC
GCAGCCTGGGGTGATCGAGCTATCAGGTACAACCACCCCATCCCCACTAT
TCCACGCTCTATGCTAACACCCTCAGACTGCACGACCTCCGCTCAAACGA
AGAATACGAAAAGACCTACCGTGATACCACGGACCAGAATCCCATCTACT
GCATCCACCCCTTCGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGAC
GCCCTAGTCAAGATCTTCGATTTACGCATGCCCAAACATGACACATACAG
CTATCGTGATGCACGCCCCTCCCGAACCCTTCCCAAGAACAACGAACCAA
TCGTAGACAGCCTCTCAAGCCTCTCCCTCACCCCAACCAACAATAGCATC
GCCTTCCCCCGCAAAGACATCTCCATCTTCCTCTCCGCCCACCCGCCCTC
CAGCCGGCCCCAAGGCCGTCGCCGCCACAACACCCGCTCCTACCGTGGTG
CAATCTACAGCATGACTTCGCCCTCCCCTTCCTCACCAACTATCTACACT
GGCGTCGCGGATGGCGTCGTTCGCCTTGACTTCGCCTCTACGGACGACCT
CCTCGGCCCTTGTCAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAACG
ATGTGCGTCTCGACAACACGGTTGCACACACCCGCTCTGCCGACAAAGTC
CTGGATTTATCGGGCTACGAGCGCCCTGAGGATACTACTGCTTCTATTAC
TTTGCGCACGCAGCAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTTG
CGGAGGAGATCACGGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACCG
GGGGCGTGGAGACGGGCTGATTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:2851988..2853861+

>CAN33_40695-T1 ID=CAN33_40695-T1|Name=CAN33_40695-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3648bp|location=Sequence derived from alignment at NKJJ01000017.1:2851988..2853861+ (Aspergillus niger FDAARGOS_311)
ATGCTTGCAGAGCTTCCTCCAGAGATTATACAGCTTATTACAAGCTATTT
GCCATCTGCCAGCGCGCTTGTGAATCTGTCAAGGACCTGTTGGCGCCTAC
ACCACGTTGTCGCTGCTCAAGATTGGCGAATCTTCAGATCCTTCGTCGAG
ACCAAGTTTCCTGGTGTGGAAACGCCCGAAATCTGGCGAGAGGCCGCTCA
GGCACTCACATCTCGCTCTCGAGCATTAGACAAACACGCAGTCGTCGGAA
GATTTGTCGTACCTGCCTCAGAAGCAGTCAAGGTCGGATCCCATAGTTCA
ACACGACGTGACAATCCTACTCATGGATATCGCCCTGCTTTGGACTCGTA
TGAAGTCTGGAATAGCTCTTCGTGGAACGACCGGAAGGAGGTGCTCGCCT
GGGGCGCGGCAGATGAACTAGTCCTGCGCATCACTGAGCCTGGCCCCAAT
TCAAAGGGGAAGTGGGTGGTCTTCAATGATCTCGATCACATCAGTAGCCA
TGATGACATCTGTGGTGTCCATATTCTACGTCCTGGACACCCTTCCAAGG
AGCCCCAGACTGAACATATAGTCGTTGCAAGAGCGCGCGGAGAGCTTTTC
CATCTCTCTATCGACCCTAACAGCGCCTGCCATATGTACAAGCAGCGGTT
CATGACCTCCGGAGGAGGCATAGAGAGAACAGATATGAGTGACGGAAAGG
ACCCTATCTTATCTGCCCACTTAAGCGACGGATCGATATCTTTCTTCAGC
ACCACTTCTGGAGAGGCGGAAGTCTACCCATTTGCTCGTCTCAATGCCGA
TTCTAGCAACAATGCAACCATCAGCTCTCGCCACAAGTATTCCAAGTTCC
TTTCGCCCTCTCTATTCGCAGTCGGCACAGGACGCATCCACGATGCAATT
ACTATCTCCGCCATCACGCCACAAGGTCTATCACCAAGTCGTGAGCTCAA
TGTGGAGCTGGTAGATTTCGAAAGACTTAATCTCGATACGACCATCAGAT
CCAACGTCAACGCCATTGCTCCACTCGATCCCACCGGACAAGTCTTCCTC
GCAGCCTGGGGTGATCGAGCTATCAGACTGCACGACCTCCGCTCAAACGA
AGAATACGAAAAGACCTACCGTGATACCACGGACCAGAATCCCATCTACT
GCATCCACCCCTTCGGCCACGACCGCTTCGTCGTCGGCGCCGGCGGTGAC
GCCCTAGTCAAGATCTTCGATTTACGCATGCCCAAACATGACACATACAG
CTATCGTGATGCACGCCCCTCCCGAACCCTTCCCAAGAACAACGAACCAA
TCGTAGACAGCCTCTCAAGCCTCTCCCTCACCCCAACCAACAATAGCATC
GCCTTCCCCCGCAAAGACATCTCCATCTTCCTCTCCGCCCACCCGCCCTC
CAGCCGGCCCCAAGGCCGTCGCCGCCACAACACCCGCTCCTACCGTGGTG
CAATCTACAGCATGACTTCGCCCTCCCCTTCCTCACCAACTATCTACACT
GGCGTCGCGGATGGCGTCGTTCGCCTTGACTTCGCCTCTACGGACGACCT
CCTCGGCCCTTGTCAGGATTGGTACCGGGAGCCACTTCTGCTCTCTAACG
ATGTGCGTCTCGACAACACGGTTGCACACACCCGCTCTGCCGACAAAGTC
CTGGATTTATCGGGCTACGAGCGCCCTGAGGATACTACTGCTTCTATTAC
TTTGCGCACGCAGCAGCCGTTTGTGTTTGTCGGGGTGGAGGATGGTCTTG
CGGAGGAGATCACGGGGTGGGATCGGAGGTGGGAGAGGTTGGAGAAACCG
GGGGCGTGGAGACGGGCTGATTGAATGCTTGCAGAGCTTCCTCCAGAGAT
TATACAGCTTATTACAAGCTATTTGCCATCTGCCAGCGCGCTTGTGAATC
TGTCAAGGACCTGTTGGCGCCTACACCACGTTGTCGCTGCTCAAGATTGG
CGAATCTTCAGATCCTTCGTCGAGACCAAGTTTCCTGGTGTGGAAACGCC
CGAAATCTGGCGAGAGGCCGCTCAGGCACTCACATCTCGCTCTCGAGCAT
TAGACAAACACGCAGTCGTCGGAAGATTTGTCGTACCTGCCTCAGAAGCA
GTCAAGGTCGGATCCCATAGTTCAACACGACGTGACAATCCTACTCATGG
ATATCGCCCTGCTTTGGACTCGTATGAAGTCTGGAATAGCTCTTCGTGGA
ACGACCGGAAGGAGGTGCTCGCCTGGGGCGCGGCAGATGAACTAGTCCTG
CGCATCACTGAGCCTGGCCCCAATTCAAAGGGGAAGTGGGTGGTCTTCAA
TGATCTCGATCACATCAGTAGCCATGATGACATCTGTGGTGTCCATATTC
TACGTCCTGGACACCCTTCCAAGGAGCCCCAGACTGAACATATAGTCGTT
GCAAGAGCGCGCGGAGAGCTTTTCCATCTCTCTATCGACCCTAACAGCGC
CTGCCATATGTACAAGCAGCGGTTCATGACCTCCGGAGGAGGCATAGAGA
GAACAGATATGAGTGACGGAAAGGACCCTATCTTATCTGCCCACTTAAGC
GACGGATCGATATCTTTCTTCAGCACCACTTCTGGAGAGGCGGAAGTCTA
CCCATTTGCTCGTCTCAATGCCGATTCTAGCAACAATGCAACCATCAGCT
CTCGCCACAAGTATTCCAAGTTCCTTTCGCCCTCTCTATTCGCAGTCGGC
ACAGGACGCATCCACGATGCAATTACTATCTCCGCCATCACGCCACAAGG
TCTATCACCAAGTCGTGAGCTCAATGTGGAGCTGGTAGATTTCGAAAGAC
TTAATCTCGATACGACCATCAGATCCAACGTCAACGCCATTGCTCCACTC
GATCCCACCGGACAAGTCTTCCTCGCAGCCTGGGGTGATCGAGCTATCAG
ACTGCACGACCTCCGCTCAAACGAAGAATACGAAAAGACCTACCGTGATA
CCACGGACCAGAATCCCATCTACTGCATCCACCCCTTCGGCCACGACCGC
TTCGTCGTCGGCGCCGGCGGTGACGCCCTAGTCAAGATCTTCGATTTACG
CATGCCCAAACATGACACATACAGCTATCGTGATGCACGCCCCTCCCGAA
CCCTTCCCAAGAACAACGAACCAATCGTAGACAGCCTCTCAAGCCTCTCC
CTCACCCCAACCAACAATAGCATCGCCTTCCCCCGCAAAGACATCTCCAT
CTTCCTCTCCGCCCACCCGCCCTCCAGCCGGCCCCAAGGCCGTCGCCGCC
ACAACACCCGCTCCTACCGTGGTGCAATCTACAGCATGACTTCGCCCTCC
CCTTCCTCACCAACTATCTACACTGGCGTCGCGGATGGCGTCGTTCGCCT
TGACTTCGCCTCTACGGACGACCTCCTCGGCCCTTGTCAGGATTGGTACC
GGGAGCCACTTCTGCTCTCTAACGATGTGCGTCTCGACAACACGGTTGCA
CACACCCGCTCTGCCGACAAAGTCCTGGATTTATCGGGCTACGAGCGCCC
TGAGGATACTACTGCTTCTATTACTTTGCGCACGCAGCAGCCGTTTGTGT
TTGTCGGGGTGGAGGATGGTCTTGCGGAGGAGATCACGGGGTGGGATCGG
AGGTGGGAGAGGTTGGAGAAACCGGGGGCGTGGAGACGGGCTGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_40695CAN33_40695Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40695-T1.exon1CAN33_40695-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_40695-T1.exon2CAN33_40695-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40695-T1.cdsCAN33_40695-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_40695-T1CAN33_40695-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
ProductF-box-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:2851988..2853861 +
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