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CAN33_4095-T1, CAN33_4095-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4095-T1
Unique NameCAN33_4095-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:186187..187717-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4095-T1 ID=CAN33_4095-T1|Name=CAN33_4095-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1531bp|location=Sequence derived from alignment at NKJJ01000019.1:186187..187717- (Aspergillus niger FDAARGOS_311)
ATGGCCCCCGACAAGAAGGACAAGAAGCGCAAGGGTATGTATTGTTACAC
CATTTGAGAGATTTTCATTCTCAACCCGTTGGTACGCCTACTGACGCTGC
TCAGCTGCCGCCGCCGCTGCCGCCGATTCGCCCGCAAAGAAGACCAAGAA
GGTCGAGGCCAAGCCTGCCGAATCCCCCAAGGACGCCCCCAAGTCTATCC
TCAAGAAGGCCAACCAAAAAGAGTCGGCTGCAAAGACCGATGGCGCTTCG
AAGGCGAAGGCCAATGGCCAGCCCGCCAGACAGATCAAGCCTCGCAAGCG
TGCGGCCGATTTCCTGAGCGACAACGACAACAGTGACTCCGAGGCGGAAG
TTGCTGAGACCAAGGTTCAGAAGGAGGAGAAGCCTACCACCAAAAAGTCG
AAGAAGGAGGACGGAACTGCTGCTCCTGCGACAAAATCCAAGCCCGCCAA
AACCAACACGAAGGCTAAGAAGGCAGAGCCTGTCCCTGAAGAATCTGAAG
AGGAAGACGAGTCCGCCGCCTCGGATGCTAGTCAGAGTGAGGATGAGGAG
GACGACCGCACAGCCGCCCTTATCAAGGGCTTTGAGAGCAGTGGCGATGA
GGATGAGTCTGGCGATGAAGGCTTCAACCCCGACCAGCCGGTCCCTAAGA
TCCCCGATTCGAAGAAGGCCAAGCGCAAGATCTTGAAGAAGCAGAAGGAG
AATGCCGGTCAAGCAGAGGAGCCTGGAACGGTTTACGTTGGGTAAGTTGA
ACCGTCAGGAAGTTCGTTTGTGACTACTATTGACACGCTATGCTACAGAC
GCATTCCCCACGGTTTCTACGAACACCAGATGCGCGCCTACTTCAGCCAG
TTCGGTGACATTACCCGCCTGCGTCTCTCCCGTAACCGTATCACCGGTCG
CTCCAAGCACTATGCTTTCATCGAGTTCGCATCTACCTCTGTCGCTAAGA
TTGTCGCTGCCACCATGGACAACTACCTCATGTACGGTCACATCCTGAAG
TGCAAATACGTGTCCCCCGAACAGCTCCACCCGGAGGTCTGGAAGGGTGC
CAACAGACGGTTCAAGCGCACCCCCTGGAACCGCATCGAGAAGAAGCGTC
TGGACAAGGGCAAGACGAGAGAGCAGTGGACGGAGCGCATTGAGAGGGAG
CAGAAGAGACGCCTCGCCAAGGCCGAGAAGCTCAAGGCTATCATGGGCTA
CGACCTCGACATTCCGCAACTGAAGAGCGTGGATGAGGTTCCTGTCCAGG
AGGCCAAGGCGATCGAGGCATCTGAGCCCGCTGCTGAAGAACCCGCCAAG
GCTATTGAGGCTGCCCCGGTCGAGGAGCCCAAGGCCGAGAAGCCCGCTGA
AGATACCCCTAAGAAGACCAACAAGAAGACCAAGAAGGCTGCTCAGTCCC
CTGCTGTGCAGGAGACTCCCAAGTCGGCAGAGAAGTCTACCCCGAAGAAG
ACCACCGAAGAAGCTGCTTCCCCAGCCGCTCAGAAGGCCAAGAAGGTCCT
CCAGAAGACCAAGGCCAAGTCTAAGGCTTAG
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Coding sequence (CDS) from alignment at NKJJ01000019.1:186187..187717-

>CAN33_4095-T1 ID=CAN33_4095-T1|Name=CAN33_4095-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5568bp|location=Sequence derived from alignment at NKJJ01000019.1:186187..187717- (Aspergillus niger FDAARGOS_311)
ACGCATTCCCCACGGTTTCTACGAACACCAGATGCGCGCCTACTTCAGCC
AGTTCGGTGACATTACCCGCCTGCGTCTCTCCCGTAACCGTATCACCGGT
CGCTCCAAGCACTATGCTTTCATCGAGTTCGCATCTACCTCTGTCGCTAA
GATTGTCGCTGCCACCATGGACAACTACCTCATGTACGGTCACATCCTGA
AGTGCAAATACGTGTCCCCCGAACAGCTCCACCCGGAGGTCTGGAAGGGT
GCCAACAGACGGTTCAAGCGCACCCCCTGGAACCGCATCGAGAAGAAGCG
TCTGGACAAGGGCAAGACGAGAGAGCAGTGGACGGAGCGCATTGAGAGGG
AGCAGAAGAGACGCCTCGCCAAGGCCGAGAAGCTCAAGGCTATCATGGGC
TACGACCTCGACATTCCGCAACTGAAGAGCGTGGATGAGGTTCCTGTCCA
GGAGGCCAAGGCGATCGAGGCATCTGAGCCCGCTGCTGAAGAACCCGCCA
AGGCTATTGAGGCTGCCCCGGTCGAGGAGCCCAAGGCCGAGAAGCCCGCT
GAAGATACCCCTAAGAAGACCAACAAGAAGACCAAGAAGGCTGCTCAGTC
CCCTGCTGTGCAGGAGACTCCCAAGTCGGCAGAGAAGTCTACCCCGAAGA
AGACCACCGAAGAAGCTGCTTCCCCAGCCGCTCAGAAGGCCAAGAAGGTC
CTCCAGAAGACCAAGGCCAAGTCTAAGGCTTAGAAGACCAAGAAGGTCGA
GGCCAAGCCTGCCGAATCCCCCAAGGACGCCCCCAAGTCTATCCTCAAGA
AGGCCAACCAAAAAGAGTCGGCTGCAAAGACCGATGGCGCTTCGAAGGCG
AAGGCCAATGGCCAGCCCGCCAGACAGATCAAGCCTCGCAAGCGTGCGGC
CGATTTCCTGAGCGACAACGACAACAGTGACTCCGAGGCGGAAGTTGCTG
AGACCAAGGTTCAGAAGGAGGAGAAGCCTACCACCAAAAAGTCGAAGAAG
GAGGACGGAACTGCTGCTCCTGCGACAAAATCCAAGCCCGCCAAAACCAA
CACGAAGGCTAAGAAGGCAGAGCCTGTCCCTGAAGAATCTGAAGAGGAAG
ACGAGTCCGCCGCCTCGGATGCTAGTCAGAGTGAGGATGAGGAGGACGAC
CGCACAGCCGCCCTTATCAAGGGCTTTGAGAGCAGTGGCGATGAGGATGA
GTCTGGCGATGAAGGCTTCAACCCCGACCAGCCGGTCCCTAAGATCCCCG
ATTCGAAGAAGGCCAAGCGCAAGATCTTGAAGAAGCAGAAGGAGAATGCC
GGTCAAGCAGAGGAGCCTGGAACGGTTTACGTTGGAGATTTTCATTCTCA
ACCCGTTGATGGCCCCCGACAAGAAGGACAAGAAGCGCAAGGACGCATTC
CCCACGGTTTCTACGAACACCAGATGCGCGCCTACTTCAGCCAGTTCGGT
GACATTACCCGCCTGCGTCTCTCCCGTAACCGTATCACCGGTCGCTCCAA
GCACTATGCTTTCATCGAGTTCGCATCTACCTCTGTCGCTAAGATTGTCG
CTGCCACCATGGACAACTACCTCATGTACGGTCACATCCTGAAGTGCAAA
TACGTGTCCCCCGAACAGCTCCACCCGGAGGTCTGGAAGGGTGCCAACAG
ACGGTTCAAGCGCACCCCCTGGAACCGCATCGAGAAGAAGCGTCTGGACA
AGGGCAAGACGAGAGAGCAGTGGACGGAGCGCATTGAGAGGGAGCAGAAG
AGACGCCTCGCCAAGGCCGAGAAGCTCAAGGCTATCATGGGCTACGACCT
CGACATTCCGCAACTGAAGAGCGTGGATGAGGTTCCTGTCCAGGAGGCCA
AGGCGATCGAGGCATCTGAGCCCGCTGCTGAAGAACCCGCCAAGGCTATT
GAGGCTGCCCCGGTCGAGGAGCCCAAGGCCGAGAAGCCCGCTGAAGATAC
CCCTAAGAAGACCAACAAGAAGACCAAGAAGGCTGCTCAGTCCCCTGCTG
TGCAGGAGACTCCCAAGTCGGCAGAGAAGTCTACCCCGAAGAAGACCACC
GAAGAAGCTGCTTCCCCAGCCGCTCAGAAGGCCAAGAAGGTCCTCCAGAA
GACCAAGGCCAAGTCTAAGGCTTAGAAGACCAAGAAGGTCGAGGCCAAGC
CTGCCGAATCCCCCAAGGACGCCCCCAAGTCTATCCTCAAGAAGGCCAAC
CAAAAAGAGTCGGCTGCAAAGACCGATGGCGCTTCGAAGGCGAAGGCCAA
TGGCCAGCCCGCCAGACAGATCAAGCCTCGCAAGCGTGCGGCCGATTTCC
TGAGCGACAACGACAACAGTGACTCCGAGGCGGAAGTTGCTGAGACCAAG
GTTCAGAAGGAGGAGAAGCCTACCACCAAAAAGTCGAAGAAGGAGGACGG
AACTGCTGCTCCTGCGACAAAATCCAAGCCCGCCAAAACCAACACGAAGG
CTAAGAAGGCAGAGCCTGTCCCTGAAGAATCTGAAGAGGAAGACGAGTCC
GCCGCCTCGGATGCTAGTCAGAGTGAGGATGAGGAGGACGACCGCACAGC
CGCCCTTATCAAGGGCTTTGAGAGCAGTGGCGATGAGGATGAGTCTGGCG
ATGAAGGCTTCAACCCCGACCAGCCGGTCCCTAAGATCCCCGATTCGAAG
AAGGCCAAGCGCAAGATCTTGAAGAAGCAGAAGGAGAATGCCGGTCAAGC
AGAGGAGCCTGGAACGGTTTACGTTGGAGATTTTCATTCTCAACCCGTTG
ATGGCCCCCGACAAGAAGGACAAGAAGCGCAAGGACGCATTCCCCACGGT
TTCTACGAACACCAGATGCGCGCCTACTTCAGCCAGTTCGGTGACATTAC
CCGCCTGCGTCTCTCCCGTAACCGTATCACCGGTCGCTCCAAGCACTATG
CTTTCATCGAGTTCGCATCTACCTCTGTCGCTAAGATTGTCGCTGCCACC
ATGGACAACTACCTCATGTACGGTCACATCCTGAAGTGCAAATACGTGTC
CCCCGAACAGCTCCACCCGGAGGTCTGGAAGGGTGCCAACAGACGGTTCA
AGCGCACCCCCTGGAACCGCATCGAGAAGAAGCGTCTGGACAAGGGCAAG
ACGAGAGAGCAGTGGACGGAGCGCATTGAGAGGGAGCAGAAGAGACGCCT
CGCCAAGGCCGAGAAGCTCAAGGCTATCATGGGCTACGACCTCGACATTC
CGCAACTGAAGAGCGTGGATGAGGTTCCTGTCCAGGAGGCCAAGGCGATC
GAGGCATCTGAGCCCGCTGCTGAAGAACCCGCCAAGGCTATTGAGGCTGC
CCCGGTCGAGGAGCCCAAGGCCGAGAAGCCCGCTGAAGATACCCCTAAGA
AGACCAACAAGAAGACCAAGAAGGCTGCTCAGTCCCCTGCTGTGCAGGAG
ACTCCCAAGTCGGCAGAGAAGTCTACCCCGAAGAAGACCACCGAAGAAGC
TGCTTCCCCAGCCGCTCAGAAGGCCAAGAAGGTCCTCCAGAAGACCAAGG
CCAAGTCTAAGGCTTAGAAGACCAAGAAGGTCGAGGCCAAGCCTGCCGAA
TCCCCCAAGGACGCCCCCAAGTCTATCCTCAAGAAGGCCAACCAAAAAGA
GTCGGCTGCAAAGACCGATGGCGCTTCGAAGGCGAAGGCCAATGGCCAGC
CCGCCAGACAGATCAAGCCTCGCAAGCGTGCGGCCGATTTCCTGAGCGAC
AACGACAACAGTGACTCCGAGGCGGAAGTTGCTGAGACCAAGGTTCAGAA
GGAGGAGAAGCCTACCACCAAAAAGTCGAAGAAGGAGGACGGAACTGCTG
CTCCTGCGACAAAATCCAAGCCCGCCAAAACCAACACGAAGGCTAAGAAG
GCAGAGCCTGTCCCTGAAGAATCTGAAGAGGAAGACGAGTCCGCCGCCTC
GGATGCTAGTCAGAGTGAGGATGAGGAGGACGACCGCACAGCCGCCCTTA
TCAAGGGCTTTGAGAGCAGTGGCGATGAGGATGAGTCTGGCGATGAAGGC
TTCAACCCCGACCAGCCGGTCCCTAAGATCCCCGATTCGAAGAAGGCCAA
GCGCAAGATCTTGAAGAAGCAGAAGGAGAATGCCGGTCAAGCAGAGGAGC
CTGGAACGGTTTACGTTGGAGATTTTCATTCTCAACCCGTTGATGGCCCC
CGACAAGAAGGACAAGAAGCGCAAGGACGCATTCCCCACGGTTTCTACGA
ACACCAGATGCGCGCCTACTTCAGCCAGTTCGGTGACATTACCCGCCTGC
GTCTCTCCCGTAACCGTATCACCGGTCGCTCCAAGCACTATGCTTTCATC
GAGTTCGCATCTACCTCTGTCGCTAAGATTGTCGCTGCCACCATGGACAA
CTACCTCATGTACGGTCACATCCTGAAGTGCAAATACGTGTCCCCCGAAC
AGCTCCACCCGGAGGTCTGGAAGGGTGCCAACAGACGGTTCAAGCGCACC
CCCTGGAACCGCATCGAGAAGAAGCGTCTGGACAAGGGCAAGACGAGAGA
GCAGTGGACGGAGCGCATTGAGAGGGAGCAGAAGAGACGCCTCGCCAAGG
CCGAGAAGCTCAAGGCTATCATGGGCTACGACCTCGACATTCCGCAACTG
AAGAGCGTGGATGAGGTTCCTGTCCAGGAGGCCAAGGCGATCGAGGCATC
TGAGCCCGCTGCTGAAGAACCCGCCAAGGCTATTGAGGCTGCCCCGGTCG
AGGAGCCCAAGGCCGAGAAGCCCGCTGAAGATACCCCTAAGAAGACCAAC
AAGAAGACCAAGAAGGCTGCTCAGTCCCCTGCTGTGCAGGAGACTCCCAA
GTCGGCAGAGAAGTCTACCCCGAAGAAGACCACCGAAGAAGCTGCTTCCC
CAGCCGCTCAGAAGGCCAAGAAGGTCCTCCAGAAGACCAAGGCCAAGTCT
AAGGCTTAGAAGACCAAGAAGGTCGAGGCCAAGCCTGCCGAATCCCCCAA
GGACGCCCCCAAGTCTATCCTCAAGAAGGCCAACCAAAAAGAGTCGGCTG
CAAAGACCGATGGCGCTTCGAAGGCGAAGGCCAATGGCCAGCCCGCCAGA
CAGATCAAGCCTCGCAAGCGTGCGGCCGATTTCCTGAGCGACAACGACAA
CAGTGACTCCGAGGCGGAAGTTGCTGAGACCAAGGTTCAGAAGGAGGAGA
AGCCTACCACCAAAAAGTCGAAGAAGGAGGACGGAACTGCTGCTCCTGCG
ACAAAATCCAAGCCCGCCAAAACCAACACGAAGGCTAAGAAGGCAGAGCC
TGTCCCTGAAGAATCTGAAGAGGAAGACGAGTCCGCCGCCTCGGATGCTA
GTCAGAGTGAGGATGAGGAGGACGACCGCACAGCCGCCCTTATCAAGGGC
TTTGAGAGCAGTGGCGATGAGGATGAGTCTGGCGATGAAGGCTTCAACCC
CGACCAGCCGGTCCCTAAGATCCCCGATTCGAAGAAGGCCAAGCGCAAGA
TCTTGAAGAAGCAGAAGGAGAATGCCGGTCAAGCAGAGGAGCCTGGAACG
GTTTACGTTGGAGATTTTCATTCTCAACCCGTTGATGGCCCCCGACAAGA
AGGACAAGAAGCGCAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4095CAN33_4095Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4095-T1CAN33_4095-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4095-T1.cdsCAN33_4095-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4095-T1.exon4CAN33_4095-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_4095-T1.exon3CAN33_4095-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4095-T1.exon2CAN33_4095-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4095-T1.exon1CAN33_4095-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264T8I
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductRNA recognition motif family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:186187..187717 -
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