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CAN33_41070-T1, CAN33_41070-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41070-T1
Unique NameCAN33_41070-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3104348..3105301-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41070-T1 ID=CAN33_41070-T1|Name=CAN33_41070-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=954bp|location=Sequence derived from alignment at NKJJ01000017.1:3104348..3105301- (Aspergillus niger FDAARGOS_311)
ATGGATATCGAACCCACCCTTCCTATTCCGATCTCGTATATTGGGGGTAG
CTACTTTCTCTTCTCAATTGATGCAGTTACGTATGTGAGACGCGAGTATC
ACATTTGCGGCGTCTTAAGCGGCACATTGCCTCAAATCCCACAACAGAAT
GTCTTCCTGGGCTTGCCATTGAAGCTAATGCCGGAAGAGGCCCGGTTGCT
CGTGGAGAAAGGTGTAGCATGCATTGTAGACGAGGTAAAAGTCCAAAAGG
ACGGAATGCGAGCCCTCATGGAGGAGGATCGCAAGAAGTATCTCCGTGAG
CTAGAATCTCAAGGCCAGCATGCTATGCGACTACAGAACGACCGGAAGGA
GCAGCAACGCGAGAAGGCTTTAAAGAAAATAGAAGAAAAGAAGGCCGCAA
AGGCCAAAAAGTCTGCTGAAAGGCAGCAGGAGCAGCAGCCTGCCCCTCTT
AATAATGAGGCTGCTGCTCAAGACCCGGTTGTTGACTTGTTCGCAAATGA
CCAGGAGGGTACTGGCGAAATGTCGCGCCGTTCTTCGACTGCCACTGCTG
CTCCCTTTGGCACTGTCATGGGAGTCACGCCTGCTACATCTTATCCGCCT
CTTCCGTATGAGTGGTCTGCTGAGCAACAGCTACCGCTTCCTGATGTGCC
TTCCTCATACCCATTATTCGCTCACCTTCATTCCGAAGGATACTTCTTAT
CCCCTGGGTTGCGATTCGGGTGTCAGTATCTTGCCTATCCCGGTGATCCT
TTACGGTTCCATTCACACTTCCTGAGTGTGTCTGCTGACTGGGATGAGGA
GTTGGATTTGATGAGCATCGTTGCCGGTGGTCGACTAGGTACTGGTGTGA
AGAAGGGTTTCTTGATTGGAGGAGCTGAGAAGAAGATCGAGGGCTCGGAT
GCTGGAGACCCCAGTAGTGTGAGGACTTTCAGCATTGAATGGGGTGGAAT
GTGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3104348..3105301-

>CAN33_41070-T1 ID=CAN33_41070-T1|Name=CAN33_41070-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=954bp|location=Sequence derived from alignment at NKJJ01000017.1:3104348..3105301- (Aspergillus niger FDAARGOS_311)
ATGGATATCGAACCCACCCTTCCTATTCCGATCTCGTATATTGGGGGTAG
CTACTTTCTCTTCTCAATTGATGCAGTTACGTATGTGAGACGCGAGTATC
ACATTTGCGGCGTCTTAAGCGGCACATTGCCTCAAATCCCACAACAGAAT
GTCTTCCTGGGCTTGCCATTGAAGCTAATGCCGGAAGAGGCCCGGTTGCT
CGTGGAGAAAGGTGTAGCATGCATTGTAGACGAGGTAAAAGTCCAAAAGG
ACGGAATGCGAGCCCTCATGGAGGAGGATCGCAAGAAGTATCTCCGTGAG
CTAGAATCTCAAGGCCAGCATGCTATGCGACTACAGAACGACCGGAAGGA
GCAGCAACGCGAGAAGGCTTTAAAGAAAATAGAAGAAAAGAAGGCCGCAA
AGGCCAAAAAGTCTGCTGAAAGGCAGCAGGAGCAGCAGCCTGCCCCTCTT
AATAATGAGGCTGCTGCTCAAGACCCGGTTGTTGACTTGTTCGCAAATGA
CCAGGAGGGTACTGGCGAAATGTCGCGCCGTTCTTCGACTGCCACTGCTG
CTCCCTTTGGCACTGTCATGGGAGTCACGCCTGCTACATCTTATCCGCCT
CTTCCGTATGAGTGGTCTGCTGAGCAACAGCTACCGCTTCCTGATGTGCC
TTCCTCATACCCATTATTCGCTCACCTTCATTCCGAAGGATACTTCTTAT
CCCCTGGGTTGCGATTCGGGTGTCAGTATCTTGCCTATCCCGGTGATCCT
TTACGGTTCCATTCACACTTCCTGAGTGTGTCTGCTGACTGGGATGAGGA
GTTGGATTTGATGAGCATCGTTGCCGGTGGTCGACTAGGTACTGGTGTGA
AGAAGGGTTTCTTGATTGGAGGAGCTGAGAAGAAGATCGAGGGCTCGGAT
GCTGGAGACCCCAGTAGTGTGAGGACTTTCAGCATTGAATGGGGTGGAAT
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000214tRNA-intron endonuclease complex
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
GO:0000379tRNA-type intron splice site recognition and cleavage
Vocabulary: Molecular Function
TermDefinition
GO:0000213tRNA-intron endonuclease activity
GO:0003676nucleic acid binding
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41070CAN33_41070Aspergillus niger FDAARGOS_311gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41070-T1.cdsCAN33_41070-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41070-T1.exon1CAN33_41070-T1.exon1Aspergillus niger FDAARGOS_311exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41070-T1CAN33_41070-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263U71
DBxrefInterPro:IPR036167
DBxrefInterPro:IPR006676
DBxrefInterPro:IPR006677
DBxrefInterPro:IPR016690
DBxrefInterPro:IPR011856
DBxrefPFAM:PF01974
ProducttRNA-intron endonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3104348..3105301 -
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