CAN33_41210-T1, CAN33_41210-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview


Name	CAN33_41210-T1
Unique Name	CAN33_41210-T1
Type	mRNA
Organism	Aspergillus niger FDAARGOS_311

Sequences

The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3177818..3180441+
coding sequence from alignment at NKJJ01000017.1:3177818..3180441+

mRNA from alignment at NKJJ01000017.1:3177818..3180441+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CAN33_41210-T1 ID=CAN33_41210-T1|Name=CAN33_41210-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2624bp|location=Sequence derived from alignment at NKJJ01000017.1:3177818..3180441+ (Aspergillus niger FDAARGOS_311)
ATGGACGCCAAGGGACTCCACCGGTTTTCCCACTTTTCCTGTCGGACCCA
GCAGGTCGTCACCTCGTCCACCTGGGAGGGTTTGCTCATCGAGCAGTCCA
CCCTGTCTGCAGATACGAAAGAGTCAGAGCGGGATACGTGGTGGGTTGAC
ATCTGCGACGCCACTGAGGAGGAGGTCAGCACTGTCTGCCAGGCATTATC
GATCCATCCCCTGACGGCAGAGGACATCGCGACCCGGGAACCTCGCGAGA
AGATTGAGGCGTTTCGCAACTACTACCTAATATCTTTTCAAACCCTGCTT
CCAACAGACGACTTTAAGAGTTCTCGAAGCCTCAAGCCATCATCGTCCAT
CCCCGGCTCCGCGGGTTTCTACATACTGGTGTTCAAGAACGCCACGGTGA
CCTTTTCTCCCAGTGGATGTCACCACATCGCCCGAGTCCGGGACCGGATC
CGTCGGACTCAGGACACACATTTGGTGTCGAGTGATTGGATCTGCTACGC
TCTTATGTACGCCCGCTATTTCTTGTCCTGATCCTCCCTGACTCCAACTA
AAACCAAAATCCAGTGACGAAATTATCGATGATTTCGAACCGTACATGCG
CGCAGCAGAACGTGAAGCCGATGCGATCGAAGATCAAGTGTTCATCGCCC
GCGTCGACGACGTCAAAGCGCTCATTCCTCAACTTGATAGCCTCCGCAAG
AGTATCACTCAGCTCATCCGCTGCCTGACCGGCAAGTACGACGTCTTAAG
TGGCTTCGTCAAGCGTTGTCAGGCGAAAGACAGAAACCCAATGTTCCCGG
ACGGCGATCTCTTGGTGTACCTGGGCGACGTACAAGACCATCTCGTGACC
ACATTGACCAGTTTGTCCCATTTCGATGAAATTGTGGGCCGGTCGCAGTC
GAACTTCCTGGCCCAGCTGAGCGTCAACAATATCCGGTTGAGTTACGACG
TGAATGCAGTCTTGAGTAAGGTGACTATCCTGGCGACAATCTTCGTACCC
TTGCACATGGTTACTGGGTTGTTTGGTATGAACGTCGAGGTGCCTGGACA
GAATGTGGATAATCTGGGATGGTTTTTTGGTATCATAGGGTGCATGTGTG
CATTTGTTGTGGTTTGTTGCTTGCTTGCGAAGAGGCTGCGGTTGCTCTAG
ACACGATCTGGGGTCCTATGGTTATTTTCATATGATCGGAAATCATTCAT
GATAGCATCAATAAAGCGCTGATTTCCCGGAATAATCTTGCTGGACAAGA
TCTTTCAACGTATACTGGCAGTTATGAGTCCGAATACCGTGGGGAGTTTG
GACGGTTTGTAGCAGCCACGCCGTCTCAGGTGACCGAGTTCCTGCTAGTT
TCACCTCATCTCATTCCGCTCTTAATCTTGCCATCAACTCGCCATTACCA
AGTCATCAACTGTCAAGACGTTTGTCATCGTTTTATCACGTCTCACGCTA
TCTCCGTCTGATAGCCATATCTCTCAATCGATATTCGTACTATCTGCGAG
ATCTCCGACCAAAGTCCCATACCGCAAGCTTTCCCGTCCCCGCTCCTGGC
CAGGGACCACGGACCGTCCCATGTGGAGTATATCGCAATATGTTGAGGCG
CTTCAGACGGAACACGGGCAGGCAAACCGACCTAGCCGGGTCGCTGATCA
TACGAGGACCTGCACATTGCTGGTATCAACCAATGGGTCTGCAGACTAGC
GTTCGGGGTTAATCAACTGAAGGTCGGAGGCACGGTCGCGGACCGCGCCA
CTACAGATAAGCACTGCTGTTCTATCATGGATCATGGCTAATGCTTCCCG
ATATAGTGAGAGTTTCCACATATCTACTATGCCGATGAAACCTTAGACAA
TATCGACCATTCTACTGTTGGGATAGTGTAAGGGTATAACATGGCAGGAC
TATATACACACGGCTGGCTGGTCAGCCATCCTGGAAAACCTTGCCTGTTC
CGGCACGTCTGCACGTGACAAGGGGCGAGTTGCTCCGAAAATGCTCATCC
TTACTGTGTCGGTCATTGTCAGCATCGGAAAGATACGGCCCCGACACCTT
ATCTGGCCAGTAAGACAAGCCTTTCCGTCACTGCAGCCAAGACGCACTCC
TATCGGACAATTCGCCAATGGTATTTCCCAGCTACAAGATAAGCCAGTTA
GGTAAGCCAGCAGTTGTCCCACCAAGACATTCGGTCCGATTAATTAGTTC
GCTGCGCTAAGACTGCCTCTGTCTCTCCCCTATTCTCAGCGAGGTTTACC
TGAGAGAATCACGTAAATTCACAACCAGGATTCATACGACTCATTCACCT
CTCACATGCAATTTACTCTGCCTTTCCAATAGTTTCTATTATCACCACAC
TAGGCATGTTAGCCGAGTTACCAGAGGACCCCGGGCCCGTGCCATGACAT
CAGCGGTATCGGGGGTCCCACGTGGCGTCGTGGCTAACGGCCAAAACCAA
TCAGGGGCAGCGATAGACGAGGAGAGCCTCTGGGAAATGAACGCCGGCGG
GGGCGGGCTGGCCATTGGGGAGGCCGTGGAATGGAGGTCCGGTGCACCCG
CTAAACTGGGTGTAGGAAAGCTGTCCCGCGAAACAGCCAGGAAACGCGGA
CGGGATGTCATGGTGATCCACTAA

Coding sequence (CDS) from alignment at NKJJ01000017.1:3177818..3180441+

>CAN33_41210-T1 ID=CAN33_41210-T1|Name=CAN33_41210-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3573bp|location=Sequence derived from alignment at NKJJ01000017.1:3177818..3180441+ (Aspergillus niger FDAARGOS_311)
ATGGACGCCAAGGGACTCCACCGGTTTTCCCACTTTTCCTGTCGGACCCA
GCAGGTCGTCACCTCGTCCACCTGGGAGGGTTTGCTCATCGAGCAGTCCA
CCCTGTCTGCAGATACGAAAGAGTCAGAGCGGGATACGTGGTGGGTTGAC
ATCTGCGACGCCACTGAGGAGGAGGTCAGCACTGTCTGCCAGGCATTATC
GATCCATCCCCTGACGGCAGAGGACATCGCGACCCGGGAACCTCGCGAGA
AGATTGAGGCGTTTCGCAACTACTACCTAATATCTTTTCAAACCCTGCTT
CCAACAGACGACTTTAAGAGTTCTCGAAGCCTCAAGCCATCATCGTCCAT
CCCCGGCTCCGCGGGTTTCTACATACTGGTGTTCAAGAACGCCACGGTGA
CCTTTTCTCCCAGTGGATGTCACCACATCGCCCGAGTCCGGGACCGGATC
CGTCGGACTCAGGACACACATTTGGTGTCGAGTGATTGGATCTGCTACGC
TCTTATTGACGAAATTATCGATGATTTCGAACCGTACATGCGCGCAGCAG
AACGTGAAGCCGATGCGATCGAAGATCAAGTGTTCATCGCCCGCGTCGAC
GACGTCAAAGCGCTCATTCCTCAACTTGATAGCCTCCGCAAGAGTATCAC
TCAGCTCATCCGCTGCCTGACCGGCAAGTACGACGTCTTAAGTGGCTTCG
TCAAGCGTTGTCAGGCGAAAGACAGAAACCCAATGTTCCCGGACGGCGAT
CTCTTGGTGTACCTGGGCGACGTACAAGACCATCTCGTGACCACATTGAC
CAGTTTGTCCCATTTCGATGAAATTGTGGGCCGGTCGCAGTCGAACTTCC
TGGCCCAGCTGAGCGTCAACAATATCCGGTTGAGTTACGACGTGAATGCA
GTCTTGAGTAAGGTGACTATCCTGGCGACAATCTTCGTACCCTTGCACAT
GGTTACTGGGTTGTTTGGTATGAACGTCGAGGTGCCTGGACAGAATGTGG
ATAATCTGGGATGGTTTTTTGGGGCAGCGATAGACGAGGAGAGCCTCTGG
GAAATGAACGCCGGCGGGGGCGGGCTGGCCATTGGGGAGGCCGTGGAATG
GAGGTCCGGTGCACCCGCTAAACTGGGTGTAGGAAAGCTGTCCCGCGAAA
CAGCCAGGAAACGCGGACGGGATGTCATGGTGATCCACTAAATGGACGCC
AAGGGACTCCACCGGTTTTCCCACTTTTCCTGTCGGACCCAGCAGGTCGT
CACCTCGTCCACCTGGGAGGGTTTGCTCATCGAGCAGTCCACCCTGTCTG
CAGATACGAAAGAGTCAGAGCGGGATACGTGGTGGGTTGACATCTGCGAC
GCCACTGAGGAGGAGGTCAGCACTGTCTGCCAGGCATTATCGATCCATCC
CCTGACGGCAGAGGACATCGCGACCCGGGAACCTCGCGAGAAGATTGAGG
CGTTTCGCAACTACTACCTAATATCTTTTCAAACCCTGCTTCCAACAGAC
GACTTTAAGAGTTCTCGAAGCCTCAAGCCATCATCGTCCATCCCCGGCTC
CGCGGGTTTCTACATACTGGTGTTCAAGAACGCCACGGTGACCTTTTCTC
CCAGTGGATGTCACCACATCGCCCGAGTCCGGGACCGGATCCGTCGGACT
CAGGACACACATTTGGTGTCGAGTGATTGGATCTGCTACGCTCTTATTGA
CGAAATTATCGATGATTTCGAACCGTACATGCGCGCAGCAGAACGTGAAG
CCGATGCGATCGAAGATCAAGTGTTCATCGCCCGCGTCGACGACGTCAAA
GCGCTCATTCCTCAACTTGATAGCCTCCGCAAGAGTATCACTCAGCTCAT
CCGCTGCCTGACCGGCAAGTACGACGTCTTAAGTGGCTTCGTCAAGCGTT
GTCAGGCGAAAGACAGAAACCCAATGTTCCCGGACGGCGATCTCTTGGTG
TACCTGGGCGACGTACAAGACCATCTCGTGACCACATTGACCAGTTTGTC
CCATTTCGATGAAATTGTGGGCCGGTCGCAGTCGAACTTCCTGGCCCAGC
TGAGCGTCAACAATATCCGGTTGAGTTACGACGTGAATGCAGTCTTGAGT
AAGGTGACTATCCTGGCGACAATCTTCGTACCCTTGCACATGGTTACTGG
GTTGTTTGGTATGAACGTCGAGGTGCCTGGACAGAATGTGGATAATCTGG
GATGGTTTTTTGGGGCAGCGATAGACGAGGAGAGCCTCTGGGAAATGAAC
GCCGGCGGGGGCGGGCTGGCCATTGGGGAGGCCGTGGAATGGAGGTCCGG
TGCACCCGCTAAACTGGGTGTAGGAAAGCTGTCCCGCGAAACAGCCAGGA
AACGCGGACGGGATGTCATGGTGATCCACTAAATGGACGCCAAGGGACTC
CACCGGTTTTCCCACTTTTCCTGTCGGACCCAGCAGGTCGTCACCTCGTC
CACCTGGGAGGGTTTGCTCATCGAGCAGTCCACCCTGTCTGCAGATACGA
AAGAGTCAGAGCGGGATACGTGGTGGGTTGACATCTGCGACGCCACTGAG
GAGGAGGTCAGCACTGTCTGCCAGGCATTATCGATCCATCCCCTGACGGC
AGAGGACATCGCGACCCGGGAACCTCGCGAGAAGATTGAGGCGTTTCGCA
ACTACTACCTAATATCTTTTCAAACCCTGCTTCCAACAGACGACTTTAAG
AGTTCTCGAAGCCTCAAGCCATCATCGTCCATCCCCGGCTCCGCGGGTTT
CTACATACTGGTGTTCAAGAACGCCACGGTGACCTTTTCTCCCAGTGGAT
GTCACCACATCGCCCGAGTCCGGGACCGGATCCGTCGGACTCAGGACACA
CATTTGGTGTCGAGTGATTGGATCTGCTACGCTCTTATTGACGAAATTAT
CGATGATTTCGAACCGTACATGCGCGCAGCAGAACGTGAAGCCGATGCGA
TCGAAGATCAAGTGTTCATCGCCCGCGTCGACGACGTCAAAGCGCTCATT
CCTCAACTTGATAGCCTCCGCAAGAGTATCACTCAGCTCATCCGCTGCCT
GACCGGCAAGTACGACGTCTTAAGTGGCTTCGTCAAGCGTTGTCAGGCGA
AAGACAGAAACCCAATGTTCCCGGACGGCGATCTCTTGGTGTACCTGGGC
GACGTACAAGACCATCTCGTGACCACATTGACCAGTTTGTCCCATTTCGA
TGAAATTGTGGGCCGGTCGCAGTCGAACTTCCTGGCCCAGCTGAGCGTCA
ACAATATCCGGTTGAGTTACGACGTGAATGCAGTCTTGAGTAAGGTGACT
ATCCTGGCGACAATCTTCGTACCCTTGCACATGGTTACTGGGTTGTTTGG
TATGAACGTCGAGGTGCCTGGACAGAATGTGGATAATCTGGGATGGTTTT
TTGGGGCAGCGATAGACGAGGAGAGCCTCTGGGAAATGAACGCCGGCGGG
GGCGGGCTGGCCATTGGGGAGGCCGTGGAATGGAGGTCCGGTGCACCCGC
TAAACTGGGTGTAGGAAAGCTGTCCCGCGAAACAGCCAGGAAACGCGGAC
GGGATGTCATGGTGATCCACTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0046873	metal ion transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0030001	metal ion transport

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CAN33_41210	CAN33_41210	Aspergillus niger FDAARGOS_311	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_41210-T1.exon1	CAN33_41210-T1.exon1	Aspergillus niger FDAARGOS_311	exon
CAN33_41210-T1.exon2	CAN33_41210-T1.exon2	Aspergillus niger FDAARGOS_311	exon
CAN33_41210-T1.exon3	CAN33_41210-T1.exon3	Aspergillus niger FDAARGOS_311	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_41210-T1.cds	CAN33_41210-T1.cds	Aspergillus niger FDAARGOS_311	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CAN33_41210-T1	CAN33_41210-T1-protein	Aspergillus niger FDAARGOS_311	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_10000171.7
DBxref	InterPro:IPR002523
DBxref	PFAM:PF01544
Product	CorA-like Mg2 transporter protein family protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger FDAARGOS_311 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NKJJ01000017.1	supercontig	NKJJ01000017.1:3177818..3180441 +

Main menu

You are here

CAN33_41210-T1, CAN33_41210-T1 (mRNA) Aspergillus niger FDAARGOS_311

Main menu

User login

You are here

CAN33_41210-T1, CAN33_41210-T1 (mRNA) Aspergillus niger FDAARGOS_311