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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:3335735..3337564- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_41490-T1 ID=CAN33_41490-T1|Name=CAN33_41490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1830bp|location=Sequence derived from alignment at NKJJ01000017.1:3335735..3337564- (Aspergillus niger FDAARGOS_311)
ATGGCACACCAAGAAACTATGGCCAGCGAAACTTCTATATCTCTACATAC
CCTGGCTTGCGATGCCACCAAGCTCGCCGGCACATACGCACTGCGCCAAG
TGCGGGAAGATGGTCATTGGTACGGTGAAATGAAATCCAATGCTACTATT
ACAGCGGAATATGTCTTTCTTGCGCAAGCCTTAGGGTTCAGCATTGAGGA
AGACCGGGACGATCTCATCAAGTATTTCCTTTCCGAGCAAAATACAGACG
GTTCATGGAGCCTGGCATATGACTTTCCCGGGGACGTTTCTGTAACCGCA
GAAGCCTACTTCGCCTTGTGCCTGTTGGGCCTCGACCGCAGCCACCCAGC
GATGGCTTCAGCGCGCGAGTTCACCCTCTCCAAAGGTGGCATAGCCAAGG
TACGCGTGTTTACTCGCATGTTCTTCGCTTGCTTCGGGCTATTTCCTTGG
TCTGCAGTGCCCGAATTGCCAGCCGAGTTGATCCTACTCCCTGCTGCAGC
CCCGATGAGCATCTACCGGCTAGCAAGTTGGGCCAGGGCGACAGTGGTTC
CCATGCTGGTCATCCGACATCATCGTCCCATTTATGCTTTGCCAAATGGA
AGATCATCTTCAAATGAATATTTGGACGAGCTTTGGGTCGATCCAACCGA
CAAAATGGTCCCCTATTCGCCTTCTTTGTGGTCATTATGGAACGATGATC
TTACAGCATTTGGCTTCACTCTAGCCGACAATATTCTGAAAGCCTTAGGT
GGCCTGCGGTGGTTCCCTTCAAGAAAAATTGCACTTCGACATTGTGTGGC
GTGGATCCTTGAACGCCAGGAGCCCGAAGGCGATATCGGAGGTATCTTCC
CTCCTCTGCATGCCGCATTGTTTGCTCTCGCGCTGGAAGGTTATGGCCTC
GAGTCTAGCCCTGTACGTCGAGGTATTGACGCCCTTCAAAACACCTACGC
GTGGAGAGACAGCACTGGTTTGAGAATACAAGGCTGTATCTCGCCAATTT
GGGATACCATCCTCATGACCATCGGCCTGATTGACTCAAGCCTTCCGGCC
GAAAGTCCCCTCGTTGCACGATCGTCACGATACCTTAAGGCCCACCAACA
GCTTGGAAACGAGGGCGATTGGAGGGTGTATAACGGAAATGTCCCATCCG
GCGGGTTCAGCTTCGAGTACTTTAATTCGTGGTATCCGGATATTGACGAT
ACTGCTGCGGCAATCTTGGCGATGGTGAAGCAGGATCCAAACCTATTAGA
CTTAGGCCCCATACTATCTGCAGTTCAATGGATCCTGGGATTGCAGAACG
ATGACGGTGGATGGGCCGCATTCGACCGGGAGAACAACTACCTGTTCCTC
AACAAAATCCCTTTCAGCGACATGGACAGTTTTTGCGACCCATCCACCGC
GGATGTGACTGGGCGTGTCATTGAATGCTTTGGCCTGTTAGCTAAGAGGG
GTTCTGTGCTGTCCAGAAATGGTAAAAACCCAATCCCTCGGTTCTTCATC
GACGACATGTCCTCAGCTACTGAGCGTGCAATCGACTTTCTTTCAACGGA
GCAAGAGGCCGATGGGTCATGGTACGGCCGCTGGGGCTCGAACTACATCT
ATGGAACTAGCGCGGTACTTTGCGGTTTGGTCTACCACTTGGAAGGCTGG
GATGATACGTATCCCGTCATGGAAAAGAGGCACAAAGTGGACACTCATGC
CGCCATGGACTGGCTCAAAAGACACCAAAATCCCGACGGTGGCTGGGGCG
AGCGCGCCTCGAATCCTATTATGAACCTAGTCTCGCAGGCAACGGGCCAT
CCACAGCATCGCAGACGGCCTGGGCATTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:3335735..3337564- >CAN33_41490-T1 ID=CAN33_41490-T1|Name=CAN33_41490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1830bp|location=Sequence derived from alignment at NKJJ01000017.1:3335735..3337564- (Aspergillus niger FDAARGOS_311)
ATGGCACACCAAGAAACTATGGCCAGCGAAACTTCTATATCTCTACATAC
CCTGGCTTGCGATGCCACCAAGCTCGCCGGCACATACGCACTGCGCCAAG
TGCGGGAAGATGGTCATTGGTACGGTGAAATGAAATCCAATGCTACTATT
ACAGCGGAATATGTCTTTCTTGCGCAAGCCTTAGGGTTCAGCATTGAGGA
AGACCGGGACGATCTCATCAAGTATTTCCTTTCCGAGCAAAATACAGACG
GTTCATGGAGCCTGGCATATGACTTTCCCGGGGACGTTTCTGTAACCGCA
GAAGCCTACTTCGCCTTGTGCCTGTTGGGCCTCGACCGCAGCCACCCAGC
GATGGCTTCAGCGCGCGAGTTCACCCTCTCCAAAGGTGGCATAGCCAAGG
TACGCGTGTTTACTCGCATGTTCTTCGCTTGCTTCGGGCTATTTCCTTGG
TCTGCAGTGCCCGAATTGCCAGCCGAGTTGATCCTACTCCCTGCTGCAGC
CCCGATGAGCATCTACCGGCTAGCAAGTTGGGCCAGGGCGACAGTGGTTC
CCATGCTGGTCATCCGACATCATCGTCCCATTTATGCTTTGCCAAATGGA
AGATCATCTTCAAATGAATATTTGGACGAGCTTTGGGTCGATCCAACCGA
CAAAATGGTCCCCTATTCGCCTTCTTTGTGGTCATTATGGAACGATGATC
TTACAGCATTTGGCTTCACTCTAGCCGACAATATTCTGAAAGCCTTAGGT
GGCCTGCGGTGGTTCCCTTCAAGAAAAATTGCACTTCGACATTGTGTGGC
GTGGATCCTTGAACGCCAGGAGCCCGAAGGCGATATCGGAGGTATCTTCC
CTCCTCTGCATGCCGCATTGTTTGCTCTCGCGCTGGAAGGTTATGGCCTC
GAGTCTAGCCCTGTACGTCGAGGTATTGACGCCCTTCAAAACACCTACGC
GTGGAGAGACAGCACTGGTTTGAGAATACAAGGCTGTATCTCGCCAATTT
GGGATACCATCCTCATGACCATCGGCCTGATTGACTCAAGCCTTCCGGCC
GAAAGTCCCCTCGTTGCACGATCGTCACGATACCTTAAGGCCCACCAACA
GCTTGGAAACGAGGGCGATTGGAGGGTGTATAACGGAAATGTCCCATCCG
GCGGGTTCAGCTTCGAGTACTTTAATTCGTGGTATCCGGATATTGACGAT
ACTGCTGCGGCAATCTTGGCGATGGTGAAGCAGGATCCAAACCTATTAGA
CTTAGGCCCCATACTATCTGCAGTTCAATGGATCCTGGGATTGCAGAACG
ATGACGGTGGATGGGCCGCATTCGACCGGGAGAACAACTACCTGTTCCTC
AACAAAATCCCTTTCAGCGACATGGACAGTTTTTGCGACCCATCCACCGC
GGATGTGACTGGGCGTGTCATTGAATGCTTTGGCCTGTTAGCTAAGAGGG
GTTCTGTGCTGTCCAGAAATGGTAAAAACCCAATCCCTCGGTTCTTCATC
GACGACATGTCCTCAGCTACTGAGCGTGCAATCGACTTTCTTTCAACGGA
GCAAGAGGCCGATGGGTCATGGTACGGCCGCTGGGGCTCGAACTACATCT
ATGGAACTAGCGCGGTACTTTGCGGTTTGGTCTACCACTTGGAAGGCTGG
GATGATACGTATCCCGTCATGGAAAAGAGGCACAAAGTGGACACTCATGC
CGCCATGGACTGGCTCAAAAGACACCAAAATCCCGACGGTGGCTGGGGCG
AGCGCGCCTCGAATCCTATTATGAACCTAGTCTCGCAGGCAACGGGCCAT
CCACAGCATCGCAGACGGCCTGGGCATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005811 | lipid droplet |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019746 | hopanoid biosynthetic process |
| GO:0016104 | triterpenoid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000250 | lanosterol synthase activity |
| GO:0016866 | intramolecular transferase activity |
| GO:0042300 | beta-amyrin synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.8 |
| DBxref | InterPro:IPR008930 |
| DBxref | InterPro:IPR006400 |
| DBxref | InterPro:IPR032697 |
| DBxref | InterPro:IPR018333 |
| DBxref | InterPro:IPR032696 |
| DBxref | PFAM:PF13249 |
| DBxref | PFAM:PF13243 |
| DBxref | PFAM:PF00432 |
| Product | squalene-hopene cyclase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:3335735..3337564 - |
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