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CAN33_41495-T1, CAN33_41495-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_41495-T1
Unique NameCAN33_41495-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3339566..3341029+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_41495-T1 ID=CAN33_41495-T1|Name=CAN33_41495-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1464bp|location=Sequence derived from alignment at NKJJ01000017.1:3339566..3341029+ (Aspergillus niger FDAARGOS_311)
ATGTTCCTGGTTTCCCTTGACACGACTATTATCTCAACCGCTATTCCTCA
GATCACAGACGAATTCAACTCCACTGCTGATGTTGGCTGGTATGGAGCTG
CATTTCTTCTGGGAAGCGCTGTAACTCAAGCACCATGGGGAAAACTATAC
GGATTTTTCGATATTAAATGGACCTACCTCCTCAGCCTACTCATGTTTGA
GTTGGGGTCTTTGCTTTGTGCTATTTCCCACAACTCCCCAACATTCATAA
TTGGCAGAGCAATTGCAGGAATAGGTGGATCAGGCATTGGGTCGGGGATA
TATACGGTCATTGGGGTCTGCGTCCCACCCAAAAAACGCCCTATACTGGT
TGGCGTCACGGGTCTGGCATTCTTGCTCGCCAGCTTTGCCGGCCCCGTTA
TCGGGGGAGAATTTACAAGCAACTTAACTTGGAGATGGTGCTTCTGGATC
AATGTACCTGTTGGCGGAGCTACTTTCGCTGTCCTCCTCCTCTTATTTCG
GCCACCCTTTCGACGCGCGAATGTAGGAGTATCACGGAAAGAGATCATCC
TCCAGCTCGATATACCGGGGGTCATTACATTAACAGGTGCATTACTCTGT
TTTCTACTCAGCCTTGAGTGGGGAGTGAGCAAGTCCTGGCATGATAGAGA
TGTGATTGGATGTCTGGTCGGTTTTCCAATCCTCACAGGGCTGTTCATCA
CGAATGAATTCTTCTGGGATGACCGGGCGATGATTCCACGTCGATTGCTT
CTCAAGAAAGAAGTTATTGTCAATCTCATTGTCATTTTTCTCCTGGCGGG
CGCGTTTTTCATGCTCCTATATTACATGCCCATCTACTTCCAGACAGTCA
AAGGTAACTCAGCCCAGGACTCAGGGATACGCACCCTGCCATTGATCGTG
TCAGCTGGCGTTATGGCAGTATTTGGAGCGATAGGGTTTGGTATCAGCGG
CTACCCGACACCGTTCTTGCTGTTTGGTGCGATGCTGATCAGTGTAGGAG
CCGGACTGCTGTACATGTTGGATCTTGTCACGCTGTCGAGTCACTGGATT
CCGTACCAGATTTTAGCAGGGCTTGGGATAGGAGCCGCACTTCAGGTACC
AATCATTATGAACCAGGCTACTGTCGATGCATCGGACATGTCAACCATGA
CATCTATAACCTTGTTCTTCAAATGTCTGGGGGCTTCGGTATTTATGCAG
ACAGGGCAGACCATATTCCTCGAGAAGGTGAAGCGGAATCTGGACATGAT
GACTGTTGCCGATGTGAACCCCAACCAAATACTCACCGGAGGCCTTGTGC
GTGTACAAGCCATCGATTCGGCCTCAAGTATAGCACTCCGCACTGCGTAC
CTTGGAGGTCTGAAAGATGTATTCTTGTTGGTAGCAGCACTCTCGGGCCT
TGCCGCTCTGCTTGCGTCACTTATGGGTCGATATAAGATGGATACTGCAC
GACTGCGGCTATGA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3339566..3341029+

>CAN33_41495-T1 ID=CAN33_41495-T1|Name=CAN33_41495-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1464bp|location=Sequence derived from alignment at NKJJ01000017.1:3339566..3341029+ (Aspergillus niger FDAARGOS_311)
ATGTTCCTGGTTTCCCTTGACACGACTATTATCTCAACCGCTATTCCTCA
GATCACAGACGAATTCAACTCCACTGCTGATGTTGGCTGGTATGGAGCTG
CATTTCTTCTGGGAAGCGCTGTAACTCAAGCACCATGGGGAAAACTATAC
GGATTTTTCGATATTAAATGGACCTACCTCCTCAGCCTACTCATGTTTGA
GTTGGGGTCTTTGCTTTGTGCTATTTCCCACAACTCCCCAACATTCATAA
TTGGCAGAGCAATTGCAGGAATAGGTGGATCAGGCATTGGGTCGGGGATA
TATACGGTCATTGGGGTCTGCGTCCCACCCAAAAAACGCCCTATACTGGT
TGGCGTCACGGGTCTGGCATTCTTGCTCGCCAGCTTTGCCGGCCCCGTTA
TCGGGGGAGAATTTACAAGCAACTTAACTTGGAGATGGTGCTTCTGGATC
AATGTACCTGTTGGCGGAGCTACTTTCGCTGTCCTCCTCCTCTTATTTCG
GCCACCCTTTCGACGCGCGAATGTAGGAGTATCACGGAAAGAGATCATCC
TCCAGCTCGATATACCGGGGGTCATTACATTAACAGGTGCATTACTCTGT
TTTCTACTCAGCCTTGAGTGGGGAGTGAGCAAGTCCTGGCATGATAGAGA
TGTGATTGGATGTCTGGTCGGTTTTCCAATCCTCACAGGGCTGTTCATCA
CGAATGAATTCTTCTGGGATGACCGGGCGATGATTCCACGTCGATTGCTT
CTCAAGAAAGAAGTTATTGTCAATCTCATTGTCATTTTTCTCCTGGCGGG
CGCGTTTTTCATGCTCCTATATTACATGCCCATCTACTTCCAGACAGTCA
AAGGTAACTCAGCCCAGGACTCAGGGATACGCACCCTGCCATTGATCGTG
TCAGCTGGCGTTATGGCAGTATTTGGAGCGATAGGGTTTGGTATCAGCGG
CTACCCGACACCGTTCTTGCTGTTTGGTGCGATGCTGATCAGTGTAGGAG
CCGGACTGCTGTACATGTTGGATCTTGTCACGCTGTCGAGTCACTGGATT
CCGTACCAGATTTTAGCAGGGCTTGGGATAGGAGCCGCACTTCAGGTACC
AATCATTATGAACCAGGCTACTGTCGATGCATCGGACATGTCAACCATGA
CATCTATAACCTTGTTCTTCAAATGTCTGGGGGCTTCGGTATTTATGCAG
ACAGGGCAGACCATATTCCTCGAGAAGGTGAAGCGGAATCTGGACATGAT
GACTGTTGCCGATGTGAACCCCAACCAAATACTCACCGGAGGCCTTGTGC
GTGTACAAGCCATCGATTCGGCCTCAAGTATAGCACTCCGCACTGCGTAC
CTTGGAGGTCTGAAAGATGTATTCTTGTTGGTAGCAGCACTCTCGGGCCT
TGCCGCTCTGCTTGCGTCACTTATGGGTCGATATAAGATGGATACTGCAC
GACTGCGGCTATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_41495CAN33_41495Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41495-T1.exon1CAN33_41495-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41495-T1.cdsCAN33_41495-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_41495-T1CAN33_41495-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000171.8
NoteSMCOG1005: EmrB/QacA
NoteSMCOG1005:Drug resistance transporter
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Productmajor facilitator superfamily protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3339566..3341029 +
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