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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:237281..238842+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4160-T1 ID=CAN33_4160-T1|Name=CAN33_4160-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1562bp|location=Sequence derived from alignment at NKJJ01000019.1:237281..238842+ (Aspergillus niger FDAARGOS_311)
ATGTCCGGATTCAACGGCCGTCGGGCCCCCAACTTCTCCCAATATCTCGA
TGATTTGAATGCCATTCCTTCGCCATACGATCAGGCCCTTCAGCAGCAAC
ATCAAGATTCATACAACCTCGAGGATGAACTGTCGCTCTTCACCAATACC
GAATTCTTCGATTTCGACAAGTTCGGCGATCTCAATCTGCCCAACTTTGA
CTCGCTGGAGGACAACACAGTCAAGAAGGAAACAGCGCAAGATGCCAGTT
CTGACATGGACTTTTTGAACATTCTGGGAGGTGAGTTGCTGCAGGCTGTC
TTTGAAAACACCACATCATGAAACTCCTGGATCCGAGCTGGGTGGCTACG
GACAACTGTTGGGGCATTGTTGAAGCAGCTGCGTACTTCATACATGCGCA
CAGCTTCAACGGTTGCTTCAACCATCAACGCTCGTCAATGTGCTCTTCCC
ATACCTTCCCCCGCCATCCTCCTCTGCCCTTTTTTTTCTTTTTTCCTGGG
CCAATTTGCTTTGATTGTGCGAATCTCGTACCCTCTCAGGGACTAGTACT
AGCGGGAGAAGCTTTACTATATCCCTGAGACACGAGCGCTCCTTCCGCCG
CGCACCTCATCTGCACGTCCGCTCATTGGCCCGTCTGCTGCATGGGGTCC
TCTTTGTCTGTGCGCGATCGCAGAACGTGCAGCGGCCTTGCCTTGGCCTG
GGATAACGCCAATCGCTCTCGTGATGGCGCCATACCACGTGACCCGTGCA
GCGTGGGAGGTTGCATAGAGACACCATTCGTGGCACATTCAAGATGATCT
GGGCTCGTGTCGATCCCAGTGATGCTGTGCTTTATACCCCAACCGCCCAG
CTTGGGACCCTTTCCCCTTTGTCGACTCTGCTTGCCTCATCAGGGGCCTT
CATCCAATCATGACAGTCATGACTAACGTTCTTTAGAAGGCTTCGGCAAC
GTCAACGACATTTCCTCTACCATGAACTCCATCAATACCCAACCTTTGCC
CGTCCAGAACACACAGTACTCAGCAGTTCCGTCCCTGCCGAACGGTCCTC
TGAACATCAATGCTGCTCCCAGCCAGTCGGCTTCTCATCCCTCCCCGCAG
TCTTCGATCACATCTCCGCCTTCCGCGGCTGCCACCCCCGCCCCGGCCCC
GGCTACCACCGCCCCCGCATCAGGACCTAAGCGCAAGAACACTCAGAAGA
CCCCAGCTATGAGCGTAGAGGAGGCCGCGCGCATTGCCGCTGAAGAAGAC
AAGCGTCGCCGCAACACCGCCGCGAGCGCCCGCTTCCGCGTGAAGAAGAA
GATGCGTGAGCAAGCTCTTGAGAAGACCGTCAAGGAGACCACCGAGAAGA
ACACTGCGCTGGAAGCCCGCGTCACGGCTCTGGAGCTGGAAAACCAATGG
CTCAAGAACCTTATCACCGAGAAGAACGGTCAAACCTCGGAAGAGGCCAA
GAAGTCGGAGAGCGACATCGCCGCCATGTTCAAGAAGTTCCTGGCTTCTC
AACAGCAGAAGGAGACCGAACGGAGTAGTTCCGAGTCCAAGATCGGTGTG
GGCACTGCCTAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:237281..238842+ >CAN33_4160-T1 ID=CAN33_4160-T1|Name=CAN33_4160-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2331bp|location=Sequence derived from alignment at NKJJ01000019.1:237281..238842+ (Aspergillus niger FDAARGOS_311)
ATGTCCGGATTCAACGGCCGTCGGGCCCCCAACTTCTCCCAATATCTCGA
TGATTTGAATGCCATTCCTTCGCCATACGATCAGGCCCTTCAGCAGCAAC
ATCAAGATTCATACAACCTCGAGGATGAACTGTCGCTCTTCACCAATACC
GAATTCTTCGATTTCGACAAGTTCGGCGATCTCAATCTGCCCAACTTTGA
CTCGCTGGAGGACAACACAGTCAAGAAGGAAACAGCGCAAGATGCCAGTT
CTGACATGGACTTTTTGAACATTCTGGGAGAAGGCTTCGGCAACGTCAAC
GACATTTCCTCTACCATGAACTCCATCAATACCCAACCTTTGCCCGTCCA
GAACACACAGTACTCAGCAGTTCCGTCCCTGCCGAACGGACCTAAGCGCA
AGAACACTCAGAAGACCCCAGCTATGAGCGTAGAGGAGGCCGCGCGCATT
GCCGCTGAAGAAGACAAGCGTCGCCGCAACACCGCCGCGAGCGCCCGCTT
CCGCGTGAAGAAGAAGATGCGTGAGCAAGCTCTTGAGAAGACCGTCAAGG
AGACCACCGAGAAGAACACTGCGCTGGAAGCCCGCGTCACGGCTCTGGAG
CTGGAAAACCAATGGCTCAAGAACCTTATCACCGAGAAGAACGGTCAAAC
CTCGGAAGAGGCCAAGAAGTCGGAGAGCGACATCGCCGCCATGTTCAAGA
AGTTCCTGGCTTCTCAACAGCAGAAGGAGACCGAACGGAGTAGTTCCGAG
TCCAAGATCGGTGTGGGCACTGCCTAGATGTCCGGATTCAACGGCCGTCG
GGCCCCCAACTTCTCCCAATATCTCGATGATTTGAATGCCATTCCTTCGC
CATACGATCAGGCCCTTCAGCAGCAACATCAAGATTCATACAACCTCGAG
GATGAACTGTCGCTCTTCACCAATACCGAATTCTTCGATTTCGACAAGTT
CGGCGATCTCAATCTGCCCAACTTTGACTCGCTGGAGGACAACACAGTCA
AGAAGGAAACAGCGCAAGATGCCAGTTCTGACATGGACTTTTTGAACATT
CTGGGAGAAGGCTTCGGCAACGTCAACGACATTTCCTCTACCATGAACTC
CATCAATACCCAACCTTTGCCCGTCCAGAACACACAGTACTCAGCAGTTC
CGTCCCTGCCGAACGGACCTAAGCGCAAGAACACTCAGAAGACCCCAGCT
ATGAGCGTAGAGGAGGCCGCGCGCATTGCCGCTGAAGAAGACAAGCGTCG
CCGCAACACCGCCGCGAGCGCCCGCTTCCGCGTGAAGAAGAAGATGCGTG
AGCAAGCTCTTGAGAAGACCGTCAAGGAGACCACCGAGAAGAACACTGCG
CTGGAAGCCCGCGTCACGGCTCTGGAGCTGGAAAACCAATGGCTCAAGAA
CCTTATCACCGAGAAGAACGGTCAAACCTCGGAAGAGGCCAAGAAGTCGG
AGAGCGACATCGCCGCCATGTTCAAGAAGTTCCTGGCTTCTCAACAGCAG
AAGGAGACCGAACGGAGTAGTTCCGAGTCCAAGATCGGTGTGGGCACTGC
CTAGATGTCCGGATTCAACGGCCGTCGGGCCCCCAACTTCTCCCAATATC
TCGATGATTTGAATGCCATTCCTTCGCCATACGATCAGGCCCTTCAGCAG
CAACATCAAGATTCATACAACCTCGAGGATGAACTGTCGCTCTTCACCAA
TACCGAATTCTTCGATTTCGACAAGTTCGGCGATCTCAATCTGCCCAACT
TTGACTCGCTGGAGGACAACACAGTCAAGAAGGAAACAGCGCAAGATGCC
AGTTCTGACATGGACTTTTTGAACATTCTGGGAGAAGGCTTCGGCAACGT
CAACGACATTTCCTCTACCATGAACTCCATCAATACCCAACCTTTGCCCG
TCCAGAACACACAGTACTCAGCAGTTCCGTCCCTGCCGAACGGACCTAAG
CGCAAGAACACTCAGAAGACCCCAGCTATGAGCGTAGAGGAGGCCGCGCG
CATTGCCGCTGAAGAAGACAAGCGTCGCCGCAACACCGCCGCGAGCGCCC
GCTTCCGCGTGAAGAAGAAGATGCGTGAGCAAGCTCTTGAGAAGACCGTC
AAGGAGACCACCGAGAAGAACACTGCGCTGGAAGCCCGCGTCACGGCTCT
GGAGCTGGAAAACCAATGGCTCAAGAACCTTATCACCGAGAAGAACGGTC
AAACCTCGGAAGAGGCCAAGAAGTCGGAGAGCGACATCGCCGCCATGTTC
AAGAAGTTCCTGGCTTCTCAACAGCAGAAGGAGACCGAACGGAGTAGTTC
CGAGTCCAAGATCGGTGTGGGCACTGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR004827 |
| DBxref | PFAM:PF07716 |
| Product | Basic region leucine zipper family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:237281..238842 + |
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