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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:3556113..3556858+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_41845-T1 ID=CAN33_41845-T1|Name=CAN33_41845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=746bp|location=Sequence derived from alignment at NKJJ01000017.1:3556113..3556858+ (Aspergillus niger FDAARGOS_311)
ATGCTCACCAAGAACCTTCTCCTCTGCTTTGCCGCGGCTAAGGCTGCTCT
GGCTGTTCCCCACGACTCTGTGGCCCAGCGTTCGGATGCCTTGCACATGC
TCTCTGAGCGCTCGACCCCGAGCTCGACCGGCGAGAACAACGGCTTCTAC
TACTCCTTCTGGACCGACGGCGGTGGAGACGTGACCTACACCAACGGAGA
TGCTGGTGCCTACACTGTTGAGTGGTCCAACGTGGGCAACTTTGTCGGTG
GAAAGGGCTGGAACCCCGGAAGTGCGCAGTAAGTTAATCCTCCTCACGCT
ATCTCTTTGCAGTAACCAATGAAACGATTACTCACAAAATAATCAGGGAC
ATCACCTACAGCGGCACCTTCACCCCTAGCGGCAACGGCTACCTCTCCGT
CTATGGCTGGACCACTGACCCTCTGATCGAGTACTACATCGTCGAGTCCT
ACGGCGACTACAACCCCGGCAGTGGAGGCACGTACAAGGGCACCGTCACC
TCGGACGGATCCGTTTACGATATCTACACGGCTACCCGTACCAATGCTGC
TTCCATTCAGGGAACCGCTACCTTCACTCAGTACTGGTCCGTTCGCCAGA
ACAAGAGAGTTGGCGGAACCGTTACCACCTCCAACCACTTCAATGCTTGG
GCTAAGCTGGGAATGAACCTGGGTACTCACAACTACCAGATCGTGGCTAC
CGAGGGTTACCAGAGCAGTGGATCTTCGTCCATCACTGTTCAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:3556113..3556858+ >CAN33_41845-T1 ID=CAN33_41845-T1|Name=CAN33_41845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1356bp|location=Sequence derived from alignment at NKJJ01000017.1:3556113..3556858+ (Aspergillus niger FDAARGOS_311)
ATGCTCACCAAGAACCTTCTCCTCTGCTTTGCCGCGGCTAAGGCTGCTCT
GGCTGTTCCCCACGACTCTGTGGCCCAGCGTTCGGATGCCTTGCACATGC
TCTCTGAGCGCTCGACCCCGAGCTCGACCGGCGAGAACAACGGCTTCTAC
TACTCCTTCTGGACCGACGGCGGTGGAGACGTGACCTACACCAACGGAGA
TGCTGGTGCCTACACTGTTGAGTGGTCCAACGTGGGCAACTTTGTCGGTG
GAAAGGGCTGGAACCCCGGAAGTGCGCAGGACATCACCTACAGCGGCACC
TTCACCCCTAGCGGCAACGGCTACCTCTCCGTCTATGGCTGGACCACTGA
CCCTCTGATCGAGTACTACATCGTCGAGTCCTACGGCGACTACAACCCCG
GCAGTGGAGGCACGTACAAGGGCACCGTCACCTCGGACGGATCCGTTTAC
GATATCTACACGGCTACCCGTACCAATGCTGCTTCCATTCAGGGAACCGC
TACCTTCACTCAGTACTGGTCCGTTCGCCAGAACAAGAGAGTTGGCGGAA
CCGTTACCACCTCCAACCACTTCAATGCTTGGGCTAAGCTGGGAATGAAC
CTGGGTACTCACAACTACCAGATCGTGGCTACCGAGGGTTACCAGAGCAG
TGGATCTTCGTCCATCACTGTTCAGTAAATGCTCACCAAGAACCTTCTCC
TCTGCTTTGCCGCGGCTAAGGCTGCTCTGGCTGTTCCCCACGACTCTGTG
GCCCAGCGTTCGGATGCCTTGCACATGCTCTCTGAGCGCTCGACCCCGAG
CTCGACCGGCGAGAACAACGGCTTCTACTACTCCTTCTGGACCGACGGCG
GTGGAGACGTGACCTACACCAACGGAGATGCTGGTGCCTACACTGTTGAG
TGGTCCAACGTGGGCAACTTTGTCGGTGGAAAGGGCTGGAACCCCGGAAG
TGCGCAGGACATCACCTACAGCGGCACCTTCACCCCTAGCGGCAACGGCT
ACCTCTCCGTCTATGGCTGGACCACTGACCCTCTGATCGAGTACTACATC
GTCGAGTCCTACGGCGACTACAACCCCGGCAGTGGAGGCACGTACAAGGG
CACCGTCACCTCGGACGGATCCGTTTACGATATCTACACGGCTACCCGTA
CCAATGCTGCTTCCATTCAGGGAACCGCTACCTTCACTCAGTACTGGTCC
GTTCGCCAGAACAAGAGAGTTGGCGGAACCGTTACCACCTCCAACCACTT
CAATGCTTGGGCTAAGCTGGGAATGAACCTGGGTACTCACAACTACCAGA
TCGTGGCTACCGAGGGTTACCAGAGCAGTGGATCTTCGTCCATCACTGTT
CAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH11 |
| DBxref | InterPro:IPR013320 |
| DBxref | InterPro:IPR018208 |
| DBxref | InterPro:IPR033119 |
| DBxref | InterPro:IPR033123 |
| DBxref | InterPro:IPR013319 |
| DBxref | InterPro:IPR001137 |
| DBxref | PFAM:PF00457 |
| Product | Glycosyl hydrolases family 11 family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:3556113..3556858 + |
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