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CAN33_42125-T1, CAN33_42125-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_42125-T1
Unique NameCAN33_42125-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:3722583..3723947+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_42125-T1 ID=CAN33_42125-T1|Name=CAN33_42125-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1365bp|location=Sequence derived from alignment at NKJJ01000017.1:3722583..3723947+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCGTATGGCA
CCCTGTCCCCCGTGTGAATTGGCTGCAGTCCATGGATCGCATATCTGAAT
TCGCTCTCCTATAGTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGG
TCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTC
TCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTGTGAGTTCCCCG
ATTTGTGACCTTTGTATACCCCTTTGGATGTTTAAGGTTCATCAGATGCA
AAGTGCACAGTATACTAAGACTTGCTGTCGATATTTAGTGCGAGTTCATG
ACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGC
CAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCTTCC
GTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGAC
TACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTG
GAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTA
ACCCCGTCGTTGTTCTTGAGAACGAGTACGTGGCCCCCGTGGAAGTATCG
GAGTATTTGTGGAATGTTTTTGAACCTGACAATAATTGCATAGGCTGCTG
TACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGT
TCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCA
TTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAG
CTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGT
CAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAGACTGGTC
GCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAG
ATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTGCTCCTGC
CGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCG
AGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAG
CTGTTGCGCCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:3722583..3723947+

>CAN33_42125-T1 ID=CAN33_42125-T1|Name=CAN33_42125-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4500bp|location=Sequence derived from alignment at NKJJ01000017.1:3722583..3723947+ (Aspergillus niger FDAARGOS_311)
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCTTACAAGG
TAACGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACC
CCCATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGC
TGGACTGCACCCCATTTGCGAGTTCATGACCTTCAACTTCGCCATGCAGG
CTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATGTCTGGT
GGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGC
TGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACGGCAGTA
TCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCCAAGGGT
CTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAA
CGAGCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGG
ATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAG
GACTTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGC
TGCTGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACC
TTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAG
AAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGT
CTCCTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGA
CTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCC
GTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCA
GGCTGCCAAGCTGTTGCGCCTGTAAATGGCTGCTCCCCGACTTTTCCGCC
CAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGA
ATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGAGGCGCTCG
CCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCTTACAAGGTAACGAGGGGTCTGTTGGACCGCTT
CGGTCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTG
GTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTTGCGAGTTC
ATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGC
TGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCT
TCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAG
GACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCC
CTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATC
CTAACCCCGTCGTTGTTCTTGAGAACGAGCTGCTGTACGGTCAGGCTTTC
CCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAA
GGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCC
GCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTAC
GGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGT
TGAGACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCG
AGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCC
ATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGG
CGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCC
CCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAA
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCG
CCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCCTCAATTC
TTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAA
GACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCTTACAAGG
TAACGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACC
CCCATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGC
TGGACTGCACCCCATTTGCGAGTTCATGACCTTCAACTTCGCCATGCAGG
CTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATGTCTGGT
GGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGC
TGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACGGCAGTA
TCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCCAAGGGT
CTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAA
CGAGCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGG
ATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAG
GACTTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGC
TGCTGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACC
TTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAG
AAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGT
CTCCTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGA
CTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCC
GTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCA
GGCTGCCAAGCTGTTGCGCCTGTAAATGGCTGCTCCCCGACTTTTCCGCC
CAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGA
ATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGAGGCGCTCG
CCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCTTACAAGGTAACGAGGGGTCTGTTGGACCGCTT
CGGTCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTG
GTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTTGCGAGTTC
ATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGC
TGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCT
TCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAG
GACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCC
CTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATC
CTAACCCCGTCGTTGTTCTTGAGAACGAGCTGCTGTACGGTCAGGCTTTC
CCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAA
GGCCAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCC
GCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTAC
GGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGT
TGAGACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCG
AGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCC
ATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGG
CGCCGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCC
CCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDB1CAN33_42125Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42125-T1.exon1CAN33_42125-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_42125-T1.exon2CAN33_42125-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_42125-T1.exon3CAN33_42125-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_42125-T1.exon4CAN33_42125-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42125-T1.cdsCAN33_42125-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42125-T1CAN33_42125-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR033248
DBxrefInterPro:IPR009014
DBxrefInterPro:IPR005475
DBxrefPFAM:PF02779
DBxrefPFAM:PF02780
Product beta subunit
Productpyruvate dehydrogenase E1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:3722583..3723947 +
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