You are here

Home

CAN33_42250-T1, CAN33_42250-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_42250-T1
Unique NameCAN33_42250-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:32814..33748+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_42250-T1 ID=CAN33_42250-T1|Name=CAN33_42250-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=935bp|location=Sequence derived from alignment at NKJJ01000022.1:32814..33748+ (Aspergillus niger FDAARGOS_311)
ATGGTCTTGGTAGCTCTTATCACAGGGGGAAGTAAGCAGTGTCCCGATAT
GCCCACGATAATGGCCGACCGAGAATAACTGTTCATAGCTAGTGGCATCG
GCCTCGACGTCGCTCAACAACTCGACGTGACAGGCCTCTGGAAAATTCAC
ATCATCGGTAGCAACTTGAAACGTGGCAAGGAGGCCGCTGCCTCGCTTAA
AAATACCACATTTCACCAGACTGATGTGACAAGTTACGAGCAGCAGGGCG
CTACGTTTCATAAGATCTTCAATGAGGAAAAGAGATTGGATTTTGTCTTT
GCGAATGCCGGAGTCGCAGAAGACACGGTATTCTTTTCCCGGCATGATAC
TGGAATTCCGCCACGGCCTGATATAGCTGGATTAACGGATATTAACTTGA
TCGGTGCGATTTATACGAGTTACCTCGCCATGCACTATTTTCGCCGATCG
CCGGAGAAGACGGTGGGAAAAAGGAATTTGGTTATTATGTCAAGCATTGG
CGGATTATATCCATGCATGCATACCCCGGTATACTCAGCGACAAAACGTA
AGTATATGTTGCTTCTTTGATGGATCAAAGCTTATAATGGTTAGATGCTC
TGGTTGGATTTACGCGCTCAGTGGGTAAACAACTGTGGAACGAGGGTGTG
AAAGTGAACGCGATTTGCCCAGGAGTGGTCCTCACGCCACTGCTAACACC
AGAGCTGAAGGCCTACTTTTCAGAGAATGTCCTGCTCACCATGAGTGATG
TGACCAATGTGATATTAAAGCTGATCTCGGAGGAAGAAGTGACTGATTCA
AAGGGGACATTTGTGCCAGGTGATCAGCTTCATTCGCAAGCAATCCTAGT
GTCGGGTGAGAAATATTACTGTGTTGATATGCCGGAATATTTTGATGAGG
AGACACAATTAACCCATAAGCATATGATGGGTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:32814..33748+

>CAN33_42250-T1 ID=CAN33_42250-T1|Name=CAN33_42250-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2493bp|location=Sequence derived from alignment at NKJJ01000022.1:32814..33748+ (Aspergillus niger FDAARGOS_311)
ATGGTCTTGGTAGCTCTTATCACAGGGGGAACTAGTGGCATCGGCCTCGA
CGTCGCTCAACAACTCGACGTGACAGGCCTCTGGAAAATTCACATCATCG
GTAGCAACTTGAAACGTGGCAAGGAGGCCGCTGCCTCGCTTAAAAATACC
ACATTTCACCAGACTGATGTGACAAGTTACGAGCAGCAGGGCGCTACGTT
TCATAAGATCTTCAATGAGGAAAAGAGATTGGATTTTGTCTTTGCGAATG
CCGGAGTCGCAGAAGACACGGTATTCTTTTCCCGGCATGATACTGGAATT
CCGCCACGGCCTGATATAGCTGGATTAACGGATATTAACTTGATCGGTGC
GATTTATACGAGTTACCTCGCCATGCACTATTTTCGCCGATCGCCGGAGA
AGACGGTGGGAAAAAGGAATTTGGTTATTATGTCAAGCATTGGCGGATTA
TATCCATGCATGCATACCCCGGTATACTCAGCGACAAAACATGCTCTGGT
TGGATTTACGCGCTCAGTGGGTAAACAACTGTGGAACGAGGGTGTGAAAG
TGAACGCGATTTGCCCAGGAGTGGTCCTCACGCCACTGCTAACACCAGAG
CTGAAGGCCTACTTTTCAGAGAATGTCCTGCTCACCATGAGTGATGTGAC
CAATGTGATATTAAAGCTGATCTCGGAGGAAGAAGTGACTGATTCAAAGG
GGACATTTGTGCCAGGTGATCAGCTTCATTCGCAAGCAATCCTAGTGTCG
GGTGAGAAATATTACTGTGTTGATATGCCGGAATATTTTGATGAGGAGAC
ACAATTAACCCATAAGCATATGATGGGTTGAATGGTCTTGGTAGCTCTTA
TCACAGGGGGAACTAGTGGCATCGGCCTCGACGTCGCTCAACAACTCGAC
GTGACAGGCCTCTGGAAAATTCACATCATCGGTAGCAACTTGAAACGTGG
CAAGGAGGCCGCTGCCTCGCTTAAAAATACCACATTTCACCAGACTGATG
TGACAAGTTACGAGCAGCAGGGCGCTACGTTTCATAAGATCTTCAATGAG
GAAAAGAGATTGGATTTTGTCTTTGCGAATGCCGGAGTCGCAGAAGACAC
GGTATTCTTTTCCCGGCATGATACTGGAATTCCGCCACGGCCTGATATAG
CTGGATTAACGGATATTAACTTGATCGGTGCGATTTATACGAGTTACCTC
GCCATGCACTATTTTCGCCGATCGCCGGAGAAGACGGTGGGAAAAAGGAA
TTTGGTTATTATGTCAAGCATTGGCGGATTATATCCATGCATGCATACCC
CGGTATACTCAGCGACAAAACATGCTCTGGTTGGATTTACGCGCTCAGTG
GGTAAACAACTGTGGAACGAGGGTGTGAAAGTGAACGCGATTTGCCCAGG
AGTGGTCCTCACGCCACTGCTAACACCAGAGCTGAAGGCCTACTTTTCAG
AGAATGTCCTGCTCACCATGAGTGATGTGACCAATGTGATATTAAAGCTG
ATCTCGGAGGAAGAAGTGACTGATTCAAAGGGGACATTTGTGCCAGGTGA
TCAGCTTCATTCGCAAGCAATCCTAGTGTCGGGTGAGAAATATTACTGTG
TTGATATGCCGGAATATTTTGATGAGGAGACACAATTAACCCATAAGCAT
ATGATGGGTTGAATGGTCTTGGTAGCTCTTATCACAGGGGGAACTAGTGG
CATCGGCCTCGACGTCGCTCAACAACTCGACGTGACAGGCCTCTGGAAAA
TTCACATCATCGGTAGCAACTTGAAACGTGGCAAGGAGGCCGCTGCCTCG
CTTAAAAATACCACATTTCACCAGACTGATGTGACAAGTTACGAGCAGCA
GGGCGCTACGTTTCATAAGATCTTCAATGAGGAAAAGAGATTGGATTTTG
TCTTTGCGAATGCCGGAGTCGCAGAAGACACGGTATTCTTTTCCCGGCAT
GATACTGGAATTCCGCCACGGCCTGATATAGCTGGATTAACGGATATTAA
CTTGATCGGTGCGATTTATACGAGTTACCTCGCCATGCACTATTTTCGCC
GATCGCCGGAGAAGACGGTGGGAAAAAGGAATTTGGTTATTATGTCAAGC
ATTGGCGGATTATATCCATGCATGCATACCCCGGTATACTCAGCGACAAA
ACATGCTCTGGTTGGATTTACGCGCTCAGTGGGTAAACAACTGTGGAACG
AGGGTGTGAAAGTGAACGCGATTTGCCCAGGAGTGGTCCTCACGCCACTG
CTAACACCAGAGCTGAAGGCCTACTTTTCAGAGAATGTCCTGCTCACCAT
GAGTGATGTGACCAATGTGATATTAAAGCTGATCTCGGAGGAAGAAGTGA
CTGATTCAAAGGGGACATTTGTGCCAGGTGATCAGCTTCATTCGCAAGCA
ATCCTAGTGTCGGGTGAGAAATATTACTGTGTTGATATGCCGGAATATTT
TGATGAGGAGACACAATTAACCCATAAGCATATGATGGGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_42250CAN33_42250Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42250-T1.exon1CAN33_42250-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_42250-T1.exon2CAN33_42250-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_42250-T1.exon3CAN33_42250-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42250-T1.cdsCAN33_42250-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42250-T1CAN33_42250-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:32814..33748 +
Powered by Drupal