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CAN33_42320-T1, CAN33_42320-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_42320-T1
Unique NameCAN33_42320-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:77306..78396+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_42320-T1 ID=CAN33_42320-T1|Name=CAN33_42320-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1091bp|location=Sequence derived from alignment at NKJJ01000022.1:77306..78396+ (Aspergillus niger FDAARGOS_311)
ATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATGTCTCCATTAAGAG
ATCATCCCAGACTCTCGCAATTCTCGCCAGCAACGCATACATCTATGGCG
GGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGTATACCGTCTGTCT
TTTGATGCTTGTAAGTCGCCATAACTTTGACCACTCGGCAAGATCTATCA
AGACCATACTTTGATTGACACAGACTAGCAACATCCAGCAACCGAAGTCT
CATACAGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGGATCCG
CCTCGACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGGGCGGT
ATCGCTATGGCCCCGATCGAGGAATCTGGCTCCTTCTGGGTCTTTGATCC
GACCCAGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTCGCAAC
ATCCTGCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAGACACT
ATCTATCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGATCTTTG
GGCCTTCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGCTCCCG
GCCCTGAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGATCTAC
CGGATGAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTGGATGT
GTATGATGTGCGGACGAATGAGTGGACTAGTCTTACTTATGCAGCGGATG
GCGTTTCCGGACCCAGTCCTCGAAGTGTCGGCTGCTTGCTCGTCACAACC
ATCGCTGGAAGGCAGTCTCTGGTAACAATGTTTGGCGAGCATGATCCAAG
TAACCTGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTGGGCAT
TTGATCTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGCCAAAC
AGACCTCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCCGAAGC
ACATGCCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGAGTCAA
ATGAGCGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:77306..78396+

>CAN33_42320-T1 ID=CAN33_42320-T1|Name=CAN33_42320-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2046bp|location=Sequence derived from alignment at NKJJ01000022.1:77306..78396+ (Aspergillus niger FDAARGOS_311)
ATGCCGCGTGCTATCTGGACAAAAATTCTCTCGGATGTCTCCATTAAGAG
ATCATCCCAGACTCTCGCAATTCTCGCCAGCAACGCATACATCTATGGCG
GGGAGCTGCGGCCAAGAGAACCAGTCGATTCTGCTGTATACCGTCTGTCT
TTTGATGCTTCAACATCCAGCAACCGAAGTCTCATACAGACTCCCCCGTC
TGCCACTCACCCCCAACCCCGCGTAGGATCCGCCTCGACCGCTCTCGCCG
GGAAACTCTATATCTTCTCTGGTCGGGGCGGTATCGCTATGGCCCCGATC
GAGGAATCTGGCTCCTTCTGGGTCTTTGATCCGACCCAGAATACCTGGTC
GCAATTGCCCCCTGCAAACTCAAACTCGCAACATCCTGCGGGCCGAAGCT
ACCACACGCTCACCAATAACGGCACAGACACTATCTATCTGCACGGTGGA
TGTCCATCGAGTGGCCGTCTACGCGATCTTTGGGCCTTCAACATCCATTC
CCGGCAATGGCTAGAGCTGCCTCCGGCTCCCGGCCCTGAACGAGGCGGTG
CGTCAATCGCGTACGCTGATCAGCGGATCTACCGGATGAACGGATTTGAC
GGAACCAGAGAGCAAGGCGGAGCTGTGGATGTGTATGATGTGCGGACGAA
TGAGTGGACTAGTCTTACTTATGCAGCGGATGGCGTTTCCGGACCCAGTC
CTCGAAGTGTCGGCTGCTTGCTCGTCACAACCATCGCTGGAAGGCAGTCT
CTGGTAACAATGTTTGGCGAGCATGATCCAAGTAACCTGGGACACCAAGG
TGCCGGGAAGATGCTAGCGGATGTGTGGGCATTTGATCTCCAATCTCAGC
GGTGGGCACAGGTGGATGTTGCGGAGCCAAACAGACCTCCGGCGCGTGGC
TGGTTTGATGCGGACGTCATCGGCCCCGAAGCACATGCCAATCCTGGGAG
CATCATAGTCCACGGTGGACTTGCGGAGTCAAATGAGCGGTTGGATGATG
TGTGGCGACTGGATTTTGTCTAGATGCCGCGTGCTATCTGGACAAAAATT
CTCTCGGATGTCTCCATTAAGAGATCATCCCAGACTCTCGCAATTCTCGC
CAGCAACGCATACATCTATGGCGGGGAGCTGCGGCCAAGAGAACCAGTCG
ATTCTGCTGTATACCGTCTGTCTTTTGATGCTTCAACATCCAGCAACCGA
AGTCTCATACAGACTCCCCCGTCTGCCACTCACCCCCAACCCCGCGTAGG
ATCCGCCTCGACCGCTCTCGCCGGGAAACTCTATATCTTCTCTGGTCGGG
GCGGTATCGCTATGGCCCCGATCGAGGAATCTGGCTCCTTCTGGGTCTTT
GATCCGACCCAGAATACCTGGTCGCAATTGCCCCCTGCAAACTCAAACTC
GCAACATCCTGCGGGCCGAAGCTACCACACGCTCACCAATAACGGCACAG
ACACTATCTATCTGCACGGTGGATGTCCATCGAGTGGCCGTCTACGCGAT
CTTTGGGCCTTCAACATCCATTCCCGGCAATGGCTAGAGCTGCCTCCGGC
TCCCGGCCCTGAACGAGGCGGTGCGTCAATCGCGTACGCTGATCAGCGGA
TCTACCGGATGAACGGATTTGACGGAACCAGAGAGCAAGGCGGAGCTGTG
GATGTGTATGATGTGCGGACGAATGAGTGGACTAGTCTTACTTATGCAGC
GGATGGCGTTTCCGGACCCAGTCCTCGAAGTGTCGGCTGCTTGCTCGTCA
CAACCATCGCTGGAAGGCAGTCTCTGGTAACAATGTTTGGCGAGCATGAT
CCAAGTAACCTGGGACACCAAGGTGCCGGGAAGATGCTAGCGGATGTGTG
GGCATTTGATCTCCAATCTCAGCGGTGGGCACAGGTGGATGTTGCGGAGC
CAAACAGACCTCCGGCGCGTGGCTGGTTTGATGCGGACGTCATCGGCCCC
GAAGCACATGCCAATCCTGGGAGCATCATAGTCCACGGTGGACTTGCGGA
GTCAAATGAGCGGTTGGATGATGTGTGGCGACTGGATTTTGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_42320CAN33_42320Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42320-T1.exon1CAN33_42320-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_42320-T1.exon2CAN33_42320-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42320-T1.cdsCAN33_42320-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42320-T1CAN33_42320-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR015915
DBxrefInterPro:IPR006652
DBxrefPFAM:PF13964
DBxrefPFAM:PF13418
DBxrefPFAM:PF13415
DBxrefPFAM:PF01344
ProductGalactose oxidase central domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:77306..78396 +
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