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CAN33_42740-T1, CAN33_42740-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_42740-T1
Unique NameCAN33_42740-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:289686..291177+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_42740-T1 ID=CAN33_42740-T1|Name=CAN33_42740-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1492bp|location=Sequence derived from alignment at NKJJ01000022.1:289686..291177+ (Aspergillus niger FDAARGOS_311)
ATGTTGCTGCGAATATGGCACATCTTGTATACCTTCATCGTAGTCGTGCA
GGCCATTGACTACGATGTCGACGATCCAGGTACTGTCCTTACCACCTTAA
TACACAACCCCATTACCTACCTACGTACCTGAACGAACCAGCTAACTAAC
CTGAATAGACTCTATCAAAGCAGCCTGCCACTCCGTCGCCCGCCAAATGC
TAACCCACTACACGGGCAACCAACCCGGCGACAACCCGGGCAACCTTCCC
GACCCCTACTACTGGTGGGAAGCCGGCGCCATGTTCACAGCGCTAGTCGA
CTACTGGTACCTCACCTCCGACGACACATGGAACAACATAACGACACAAG
GCATAACCTGGCAAGCCGGGCCCAGCGGCTCCTTCATGCCAGCGAACCAA
ACCCGCACCGAGGGCAACGACGACCAATCCTTTTGGGCTTTCGCAGCCAT
GTCCGCCGCAGAGCGAAATTTCCCAGACCCGCCTCCATCCTCCGGAAGCC
CAGGGTGGCTCGCCATGGCGCAAGCCGTATTCAACACTCAAGCTGCGCGG
TGGGACAAGAGTACCTGTAACGGCGGGCTACGATGGCAGATATTCACGTT
CAACAATGGCTGGACGTATAAGAATACCATCTCGAACGGATGTTTTTTCA
ATCTTGCTGCTAGGCTGGCCAAGTATACAGGGAATAGCACGTATGCGGAC
TGGGCGGATACAGTGTGGGACTGGACGGGCGAGGTAGGGTTCATGACGGA
TACGTATCGGTTTTGGGATGGGGCGGATGTGAGCAGTGGGTGTGGGGATT
GGAATTATATTGAGTGGACGTATAATACGGGCGTTTATCTGCTGGGGGCG
GCGGTTATGTATAATTTGGTGGGTTTCTTTCTCCCCTGATTGTGATTATT
GGTGGGAGGTGGCTAATGGTGACAGACTGAATCGCCCGTCTGGAAAGCCC
GAACAGAAGGCATTCTCAACGCCAGCTTCGTCTTCTTCCAAGACGATGTC
ATGTATGAGCGGGCATGTGAACCTGTGAGCACATGCCAGGTCGATCAGCG
CTCCTTCAAGGGATACTTGGCGCGCTGGATGGCCGCGACAACGCAAATGG
CGCCGTTCACGTATGACCTGGTGATGCCGAAGCTGAGGGCGTCGGCCAAG
GCGGCGGCGGAGACATGCACAGGGGGTGAACTCCAGGCGACGTGCGGGTT
GAAGTGGACGGATCGGAAGTGGGATGGAATGGATGATGTGGGGATCCAGA
TGGCGGCGCTGGAGGTGATGCAGTCGACGTTGATCAGTAGGGTTGATCCT
CCTGTCACGCAGGACACAGGCGGCACGAGTCAGGGCAATCCGGCGGGTGG
AGAGCCAGGACCCCCGCCGGCGCCGGTGCCGGAGGGACTGAGGTTGGAGA
TCACGAAGGCGGATCGGGCGGGGGCAGGGATGATGACGGTGATGCTTTCG
ATGATAGTTATTGGGTCCACGGGATGGATGGTTTACGAGTAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:289686..291177+

>CAN33_42740-T1 ID=CAN33_42740-T1|Name=CAN33_42740-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4068bp|location=Sequence derived from alignment at NKJJ01000022.1:289686..291177+ (Aspergillus niger FDAARGOS_311)
ATGTTGCTGCGAATATGGCACATCTTGTATACCTTCATCGTAGTCGTGCA
GGCCATTGACTACGATGTCGACGATCCAGACTCTATCAAAGCAGCCTGCC
ACTCCGTCGCCCGCCAAATGCTAACCCACTACACGGGCAACCAACCCGGC
GACAACCCGGGCAACCTTCCCGACCCCTACTACTGGTGGGAAGCCGGCGC
CATGTTCACAGCGCTAGTCGACTACTGGTACCTCACCTCCGACGACACAT
GGAACAACATAACGACACAAGGCATAACCTGGCAAGCCGGGCCCAGCGGC
TCCTTCATGCCAGCGAACCAAACCCGCACCGAGGGCAACGACGACCAATC
CTTTTGGGCTTTCGCAGCCATGTCCGCCGCAGAGCGAAATTTCCCAGACC
CGCCTCCATCCTCCGGAAGCCCAGGGTGGCTCGCCATGGCGCAAGCCGTA
TTCAACACTCAAGCTGCGCGGTGGGACAAGAGTACCTGTAACGGCGGGCT
ACGATGGCAGATATTCACGTTCAACAATGGCTGGACGTATAAGAATACCA
TCTCGAACGGATGTTTTTTCAATCTTGCTGCTAGGCTGGCCAAGTATACA
GGGAATAGCACGTATGCGGACTGGGCGGATACAGTGTGGGACTGGACGGG
CGAGGTAGGGTTCATGACGGATACGTATCGGTTTTGGGATGGGGCGGATG
TGAGCAGTGGGTGTGGGGATTGGAATTATATTGAGTGGACGTATAATACG
GGCGTTTATCTGCTGGGGGCGGCGGTTATGTATAATTTGACTGAATCGCC
CGTCTGGAAAGCCCGAACAGAAGGCATTCTCAACGCCAGCTTCGTCTTCT
TCCAAGACGATGTCATGTATGAGCGGGCATGTGAACCTGTGAGCACATGC
CAGGTCGATCAGCGCTCCTTCAAGGGATACTTGGCGCGCTGGATGGCCGC
GACAACGCAAATGGCGCCGTTCACGTATGACCTGGTGATGCCGAAGCTGA
GGGCGTCGGCCAAGGCGGCGGCGGAGACATGCACAGGGGGTGAACTCCAG
GCGACGTGCGGGTTGAAGTGGACGGATCGGAAGTGGGATGGAATGGATGA
TGTGGGGATCCAGATGGCGGCGCTGGAGGTGATGCAGTCGACGTTGATCA
GTAGGGTTGATCCTCCTGTCACGCAGGACACAGGCGGCACGAGTCAGGGC
AATCCGGCGGGTGGAGAGCCAGGACCCCCGCCGGCGCCGGTGCCGGAGGG
ACTGAGGTTGGAGATCACGAAGGCGGATCGGGCGGGGGCAGGGATGATGA
CGGTGATGCTTTCGATGATAGTTATTGGGTCCACGGGATGGATGGTTTAC
GAGTAAATGTTGCTGCGAATATGGCACATCTTGTATACCTTCATCGTAGT
CGTGCAGGCCATTGACTACGATGTCGACGATCCAGACTCTATCAAAGCAG
CCTGCCACTCCGTCGCCCGCCAAATGCTAACCCACTACACGGGCAACCAA
CCCGGCGACAACCCGGGCAACCTTCCCGACCCCTACTACTGGTGGGAAGC
CGGCGCCATGTTCACAGCGCTAGTCGACTACTGGTACCTCACCTCCGACG
ACACATGGAACAACATAACGACACAAGGCATAACCTGGCAAGCCGGGCCC
AGCGGCTCCTTCATGCCAGCGAACCAAACCCGCACCGAGGGCAACGACGA
CCAATCCTTTTGGGCTTTCGCAGCCATGTCCGCCGCAGAGCGAAATTTCC
CAGACCCGCCTCCATCCTCCGGAAGCCCAGGGTGGCTCGCCATGGCGCAA
GCCGTATTCAACACTCAAGCTGCGCGGTGGGACAAGAGTACCTGTAACGG
CGGGCTACGATGGCAGATATTCACGTTCAACAATGGCTGGACGTATAAGA
ATACCATCTCGAACGGATGTTTTTTCAATCTTGCTGCTAGGCTGGCCAAG
TATACAGGGAATAGCACGTATGCGGACTGGGCGGATACAGTGTGGGACTG
GACGGGCGAGGTAGGGTTCATGACGGATACGTATCGGTTTTGGGATGGGG
CGGATGTGAGCAGTGGGTGTGGGGATTGGAATTATATTGAGTGGACGTAT
AATACGGGCGTTTATCTGCTGGGGGCGGCGGTTATGTATAATTTGACTGA
ATCGCCCGTCTGGAAAGCCCGAACAGAAGGCATTCTCAACGCCAGCTTCG
TCTTCTTCCAAGACGATGTCATGTATGAGCGGGCATGTGAACCTGTGAGC
ACATGCCAGGTCGATCAGCGCTCCTTCAAGGGATACTTGGCGCGCTGGAT
GGCCGCGACAACGCAAATGGCGCCGTTCACGTATGACCTGGTGATGCCGA
AGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGACATGCACAGGGGGTGAA
CTCCAGGCGACGTGCGGGTTGAAGTGGACGGATCGGAAGTGGGATGGAAT
GGATGATGTGGGGATCCAGATGGCGGCGCTGGAGGTGATGCAGTCGACGT
TGATCAGTAGGGTTGATCCTCCTGTCACGCAGGACACAGGCGGCACGAGT
CAGGGCAATCCGGCGGGTGGAGAGCCAGGACCCCCGCCGGCGCCGGTGCC
GGAGGGACTGAGGTTGGAGATCACGAAGGCGGATCGGGCGGGGGCAGGGA
TGATGACGGTGATGCTTTCGATGATAGTTATTGGGTCCACGGGATGGATG
GTTTACGAGTAAATGTTGCTGCGAATATGGCACATCTTGTATACCTTCAT
CGTAGTCGTGCAGGCCATTGACTACGATGTCGACGATCCAGACTCTATCA
AAGCAGCCTGCCACTCCGTCGCCCGCCAAATGCTAACCCACTACACGGGC
AACCAACCCGGCGACAACCCGGGCAACCTTCCCGACCCCTACTACTGGTG
GGAAGCCGGCGCCATGTTCACAGCGCTAGTCGACTACTGGTACCTCACCT
CCGACGACACATGGAACAACATAACGACACAAGGCATAACCTGGCAAGCC
GGGCCCAGCGGCTCCTTCATGCCAGCGAACCAAACCCGCACCGAGGGCAA
CGACGACCAATCCTTTTGGGCTTTCGCAGCCATGTCCGCCGCAGAGCGAA
ATTTCCCAGACCCGCCTCCATCCTCCGGAAGCCCAGGGTGGCTCGCCATG
GCGCAAGCCGTATTCAACACTCAAGCTGCGCGGTGGGACAAGAGTACCTG
TAACGGCGGGCTACGATGGCAGATATTCACGTTCAACAATGGCTGGACGT
ATAAGAATACCATCTCGAACGGATGTTTTTTCAATCTTGCTGCTAGGCTG
GCCAAGTATACAGGGAATAGCACGTATGCGGACTGGGCGGATACAGTGTG
GGACTGGACGGGCGAGGTAGGGTTCATGACGGATACGTATCGGTTTTGGG
ATGGGGCGGATGTGAGCAGTGGGTGTGGGGATTGGAATTATATTGAGTGG
ACGTATAATACGGGCGTTTATCTGCTGGGGGCGGCGGTTATGTATAATTT
GACTGAATCGCCCGTCTGGAAAGCCCGAACAGAAGGCATTCTCAACGCCA
GCTTCGTCTTCTTCCAAGACGATGTCATGTATGAGCGGGCATGTGAACCT
GTGAGCACATGCCAGGTCGATCAGCGCTCCTTCAAGGGATACTTGGCGCG
CTGGATGGCCGCGACAACGCAAATGGCGCCGTTCACGTATGACCTGGTGA
TGCCGAAGCTGAGGGCGTCGGCCAAGGCGGCGGCGGAGACATGCACAGGG
GGTGAACTCCAGGCGACGTGCGGGTTGAAGTGGACGGATCGGAAGTGGGA
TGGAATGGATGATGTGGGGATCCAGATGGCGGCGCTGGAGGTGATGCAGT
CGACGTTGATCAGTAGGGTTGATCCTCCTGTCACGCAGGACACAGGCGGC
ACGAGTCAGGGCAATCCGGCGGGTGGAGAGCCAGGACCCCCGCCGGCGCC
GGTGCCGGAGGGACTGAGGTTGGAGATCACGAAGGCGGATCGGGCGGGGG
CAGGGATGATGACGGTGATGCTTTCGATGATAGTTATTGGGTCCACGGGA
TGGATGGTTTACGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_42740CAN33_42740Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42740-T1.exon1CAN33_42740-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_42740-T1.exon2CAN33_42740-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_42740-T1.exon3CAN33_42740-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42740-T1.cdsCAN33_42740-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42740-T1CAN33_42740-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH76
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR005198
DBxrefInterPro:IPR014480
DBxrefPFAM:PF03663
ProductGlycosyl hydrolase family 76 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:289686..291177 +
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