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CAN33_42815-T1, CAN33_42815-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_42815-T1
Unique NameCAN33_42815-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:325296..327338-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_42815-T1 ID=CAN33_42815-T1|Name=CAN33_42815-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2043bp|location=Sequence derived from alignment at NKJJ01000022.1:325296..327338- (Aspergillus niger FDAARGOS_311)
ATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGAAGCCCGA
CCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCCCGATGGG
GATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGATCGAAGAG
GACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAAAACTTGC
TGAGGATGTGGACTCAACCGAGCGTCTGGAAACATTGTACAAGCGACGTG
CCGAGATCTTGCAGTTCGCTATGTAAGTAGGTGGTCTGCTGGTAGCAATG
GTGGACAATTGCGCTAATTGATTTGTTGCGGGTTGAAGGCAGGCGCATAT
GGAAGCTCTGTTCGCTTTGGATTTTGTTTCCCTTTTGCTTTCGAAGCATA
CCCCTCGCCAGGCGGAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCG
CCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGA
GGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGA
ACTTCAATGCCGCTGCGAATAAATTGCTCAATTCGGCGACGCGATTGGAA
GAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTACTGGCGGTTAA
GGAGAAGGGTTGGAAGGTGTGCAGGTTGCCCCGGGAGAGAACTGCGCTGG
GAGTACAATATGGGTTCTTGGAAGGTAGGATGGCTACGTGCTTCTGCTGG
ACTGATGCTGACTGTGTTCCTATAGCTACGCCTATATTCCGCGACCGGGG
TCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATACTGGATAAGG
GACTGGCACCACAGAAGACGAGGACGGTTCGAGTGCGTGTGAAGCACCGC
GGACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCCCGATGCAGC
GTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGTACGAGGAGG
AGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGAAGTCATGGT
GTGACGACTCGCCAAAACCTGGTCCGACTGCCGATATCCGAGGACCAAGA
GATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCGACGAAGACA
AGATCGAGTCAACAGAACACGACGTCCTTGCTAATGGGCTTTCACACTCA
ATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCGACGCAGAAC
CCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCCCCGAGTATC
AGCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCGCACGTCCGG
TGGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCGGGCGGCAGG
GATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCGA
AGGTGCGGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAGTTCCTGATG
CCCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCAAAGCTCTTT
TCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTGGCACCCACT
ACGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAGCCTCCCGGT
CGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCATTTCGTCAA
GTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGACGACCAAAA
ATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGCA
TATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCAA
GAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGGAAACATTTT
CACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACCA
AGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTCTAAGCCTGG
TCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCATAA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:325296..327338-

>CAN33_42815-T1 ID=CAN33_42815-T1|Name=CAN33_42815-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5364bp|location=Sequence derived from alignment at NKJJ01000022.1:325296..327338- (Aspergillus niger FDAARGOS_311)
CTACGCCTATATTCCGCGACCGGGGTCTTGCTGCTCTACGGAGGGCTGAT
AATGGAAGCTTAATACTGGATAAGGGACTGGCACCACAGAAGACGAGGAC
GGTTCGAGTGCGTGTGAAGCACCGCGGACAACTTACGGGATGCTCTAAAA
TGCCGGATCCGATCCCCGATGCAGCGTCGGTCGAGCGCAGGATTTTGCAA
GCACGCGACACAGTGTACGAGGAGGAGCTATTCCACGAGTTGATGCGCGA
AGCGCGTATCATGGGAAGTCATGGTGTGACGACTCGCCAAAACCTGGTCC
GACTGCCGATATCCGAGGACCAAGAGATCCTGCTGGATCTGGTAGATGCG
GACCGTGAAACGCCCGACGAAGACAAGATCGAGTCAACAGAACACGACGT
CCTTGCTAATGGGCTTTCACACTCAATTCGGATCCTGCTCGCGTATGCAC
ACCGCCAGAACCTGCGACGCAGAACCCAACCGCCGCCCCCGCTCTCCCAG
AAACGTCGGCTTACCCCCGAGTATCAGCTCCTGCGCCCTGTCATGGCGTA
TCTCCAACACAGCTCGCACGTCCGGTGGTTGGAGTCTTTCATGAATGATA
TATACCGGGTTCTGCGGGCGGCAGGGATCGAGCGTGATTTCCACGCCGTG
CCTTTTGCGTCTGTGAGCCTTCCGAAGGTGCGGGCTGTTCCGAAGGTAGA
GAGTCTGGTACAACAGTTCCTGATGCCCTTCGAATCGACATTTTCCGGCC
ATCTGATCACCCCTCAAAGCTCTTTTCGCGTGAAAATCCGCACCAACCCG
GTGTCGCCGCCATTTGGCACCCACTACGACATTTCCATTGACCTACCTCA
CCACCCCGAAGTTCAGCCTCCCGGTCGGGTTGGACTGCAGAATGAAGCAG
CTGCAGCTCTCATGCATTTCGTCAAGTTGGACATCGTGTCGGCCATCGCG
CTCCAGGGCTCGAAGACGACCAAAAATACCACCAAGAAAGAAGGCGCCGA
GGGGACTTTGACGTGGGAGGCGGCATATCCGCACCACGGCGAACTGCTGG
CGTTTTCGACTGCTGGCCAAAGCAAGAAGCTGAAAATCAGCCTGTCACGG
GAGGAATTGAAAGTGGAAACATTTTCACTTCGGGGACTTGAAGGGTTTGG
CCGATCGGGCGGCCCCAAGGCACCAAGTTTGCAGTCTCAGACGTGGACAG
CCACTCAGACAGATTCTAAGCCTGGTCTGATGGATTTTGTCGCGGAGGTT
TCGCGGGAGCAGTCATAAGCGGAGACTTCGATGTCGGCGTTCCTGAAACA
GGTTGCGCCGCTTGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGA
AGTCGGAGGCCGCTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGG
GCGCAGAACTTCAATGCCGCTGCGAATAAATTGCTCAATTCGGCGACGCG
ATTGGAAGAAGAGGTCGCTTCGGAGACGAAGTACTGGGATGAAGTACTGG
CGGTTAAGGAGAAGGGTTGGAAGGTGTGCAGGTTGCCCCGGGAGAGAACT
GCGCTGGGAGTACAATATGGGTTCTTGGAAGATGTCCGACTCATTCAGCC
TCCCCCTGCGCCCGCTCACCGAGAAGCCCGACCGCCCCGATACCCTTCCA
ATCGAGATCGCCCAAATCAACGCCCGATGGGGATCTTTCCGCGACGTGAA
CGAAGAGACACTGCTCGCCAAGATCGAAGAGGACAAGAACCGGGACCCAT
GGGAAGAGGAAGATGAGGACGAAAAACTTGCTGAGGATCTACGCCTATAT
TCCGCGACCGGGGTCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTA
ATACTGGATAAGGGACTGGCACCACAGAAGACGAGGACGGTTCGAGTGCG
TGTGAAGCACCGCGGACAACTTACGGGATGCTCTAAAATGCCGGATCCGA
TCCCCGATGCAGCGTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACA
GTGTACGAGGAGGAGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCAT
GGGAAGTCATGGTGTGACGACTCGCCAAAACCTGGTCCGACTGCCGATAT
CCGAGGACCAAGAGATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACG
CCCGACGAAGACAAGATCGAGTCAACAGAACACGACGTCCTTGCTAATGG
GCTTTCACACTCAATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACC
TGCGACGCAGAACCCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTT
ACCCCCGAGTATCAGCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAG
CTCGCACGTCCGGTGGTTGGAGTCTTTCATGAATGATATATACCGGGTTC
TGCGGGCGGCAGGGATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCT
GTGAGCCTTCCGAAGGTGCGGGCTGTTCCGAAGGTAGAGAGTCTGGTACA
ACAGTTCCTGATGCCCTTCGAATCGACATTTTCCGGCCATCTGATCACCC
CTCAAAGCTCTTTTCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCA
TTTGGCACCCACTACGACATTTCCATTGACCTACCTCACCACCCCGAAGT
TCAGCCTCCCGGTCGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCA
TGCATTTCGTCAAGTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCG
AAGACGACCAAAAATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGAC
GTGGGAGGCGGCATATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTG
CTGGCCAAAGCAAGAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAA
GTGGAAACATTTTCACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGG
CCCCAAGGCACCAAGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAG
ATTCTAAGCCTGGTCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAG
TCATAAGCGGAGACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCT
TGGGTCGTTGAATGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCG
CTGTGCAGGATGTCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTC
AATGCCGCTGCGAATAAATTGCTCAATTCGGCGACGCGATTGGAAGAAGA
GGTCGCTTCGGAGACGAAGTACTGGGATGAAGTACTGGCGGTTAAGGAGA
AGGGTTGGAAGGTGTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTA
CAATATGGGTTCTTGGAAGATGTCCGACTCATTCAGCCTCCCCCTGCGCC
CGCTCACCGAGAAGCCCGACCGCCCCGATACCCTTCCAATCGAGATCGCC
CAAATCAACGCCCGATGGGGATCTTTCCGCGACGTGAACGAAGAGACACT
GCTCGCCAAGATCGAAGAGGACAAGAACCGGGACCCATGGGAAGAGGAAG
ATGAGGACGAAAAACTTGCTGAGGATCTACGCCTATATTCCGCGACCGGG
GTCTTGCTGCTCTACGGAGGGCTGATAATGGAAGCTTAATACTGGATAAG
GGACTGGCACCACAGAAGACGAGGACGGTTCGAGTGCGTGTGAAGCACCG
CGGACAACTTACGGGATGCTCTAAAATGCCGGATCCGATCCCCGATGCAG
CGTCGGTCGAGCGCAGGATTTTGCAAGCACGCGACACAGTGTACGAGGAG
GAGCTATTCCACGAGTTGATGCGCGAAGCGCGTATCATGGGAAGTCATGG
TGTGACGACTCGCCAAAACCTGGTCCGACTGCCGATATCCGAGGACCAAG
AGATCCTGCTGGATCTGGTAGATGCGGACCGTGAAACGCCCGACGAAGAC
AAGATCGAGTCAACAGAACACGACGTCCTTGCTAATGGGCTTTCACACTC
AATTCGGATCCTGCTCGCGTATGCACACCGCCAGAACCTGCGACGCAGAA
CCCAACCGCCGCCCCCGCTCTCCCAGAAACGTCGGCTTACCCCCGAGTAT
CAGCTCCTGCGCCCTGTCATGGCGTATCTCCAACACAGCTCGCACGTCCG
GTGGTTGGAGTCTTTCATGAATGATATATACCGGGTTCTGCGGGCGGCAG
GGATCGAGCGTGATTTCCACGCCGTGCCTTTTGCGTCTGTGAGCCTTCCG
AAGGTGCGGGCTGTTCCGAAGGTAGAGAGTCTGGTACAACAGTTCCTGAT
GCCCTTCGAATCGACATTTTCCGGCCATCTGATCACCCCTCAAAGCTCTT
TTCGCGTGAAAATCCGCACCAACCCGGTGTCGCCGCCATTTGGCACCCAC
TACGACATTTCCATTGACCTACCTCACCACCCCGAAGTTCAGCCTCCCGG
TCGGGTTGGACTGCAGAATGAAGCAGCTGCAGCTCTCATGCATTTCGTCA
AGTTGGACATCGTGTCGGCCATCGCGCTCCAGGGCTCGAAGACGACCAAA
AATACCACCAAGAAAGAAGGCGCCGAGGGGACTTTGACGTGGGAGGCGGC
ATATCCGCACCACGGCGAACTGCTGGCGTTTTCGACTGCTGGCCAAAGCA
AGAAGCTGAAAATCAGCCTGTCACGGGAGGAATTGAAAGTGGAAACATTT
TCACTTCGGGGACTTGAAGGGTTTGGCCGATCGGGCGGCCCCAAGGCACC
AAGTTTGCAGTCTCAGACGTGGACAGCCACTCAGACAGATTCTAAGCCTG
GTCTGATGGATTTTGTCGCGGAGGTTTCGCGGGAGCAGTCATAAGCGGAG
ACTTCGATGTCGGCGTTCCTGAAACAGGTTGCGCCGCTTGGGTCGTTGAA
TGCGGAGATCGTCGAGCCGCCGCCGAAGTCGGAGGCCGCTGTGCAGGATG
TCAAGACTGTGTCGCGGGGTTGGAGGGCGCAGAACTTCAATGCCGCTGCG
AATAAATTGCTCAATTCGGCGACGCGATTGGAAGAAGAGGTCGCTTCGGA
GACGAAGTACTGGGATGAAGTACTGGCGGTTAAGGAGAAGGGTTGGAAGG
TGTGCAGGTTGCCCCGGGAGAGAACTGCGCTGGGAGTACAATATGGGTTC
TTGGAAGATGTCCGACTCATTCAGCCTCCCCCTGCGCCCGCTCACCGAGA
AGCCCGACCGCCCCGATACCCTTCCAATCGAGATCGCCCAAATCAACGCC
CGATGGGGATCTTTCCGCGACGTGAACGAAGAGACACTGCTCGCCAAGAT
CGAAGAGGACAAGAACCGGGACCCATGGGAAGAGGAAGATGAGGACGAAA
AACTTGCTGAGGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SRB4CAN33_42815Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42815-T1CAN33_42815-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42815-T1.cdsCAN33_42815-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_42815-T1.exon3CAN33_42815-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_42815-T1.exon2CAN33_42815-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_42815-T1.exon1CAN33_42815-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR019313
DBxrefPFAM:PF10156
ProductRNA polymerase II mediator complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:325296..327338 -
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