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CAN33_43445-T1, CAN33_43445-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43445-T1
Unique NameCAN33_43445-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:747539..749138-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43445-T1 ID=CAN33_43445-T1|Name=CAN33_43445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1600bp|location=Sequence derived from alignment at NKJJ01000022.1:747539..749138- (Aspergillus niger FDAARGOS_311)
ATGCAGAATTCCCCCAAGAAGCCCGACACCGTCGCAAAGCGGCGCAAGAG
AGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTTGACGAGGTCCTCC
AGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTC
GAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTT
CACCGAAATTGAAGTTCAGGTCGCTGATGTATCATCAACGGGTGATGGTT
TAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTC
CCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTC
CTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCA
ACGATGCCGGCATTGGTTGCCAGTATTTTGGTCGGTGCTCGGGATGCCAG
CTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGT
GGAGAAGGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCG
CCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACAAAG
CTCACGCCGCACTTTGCAGCCCCTGGCGGAAACAAGAGGAGGGTAAGGGC
CCCGCGAGCCGCACAAGGAGGTACCTCCGATTGGCTTCACTTTCAAGAAC
CGACGCATGGATTTGGATATCGAAGACTGCCCCTTGGGCACCGACATTGT
CCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGGCA
AGTACACCAAAGGTGCCACCCTTCTCATGCGCGAATCCACCAGCCGCGTG
CCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCCGG
ACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGAAG
AGAAGCGCTGCGTGACTGACTCGAACGCCACCAGCATCGAATATGTCGAC
GACTACGTCTTCACCAACAAAGCCGGCGCGTTCTTCCAGAACAACAACTC
CATCCTATCTGGATTCACCGAGTTCATCCGCCAACACGCTATGCCCCCGA
ACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACTCC
GGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTCTTCAAGTCCAGTCT
GGGCGTCGATGTTGCCGGCGACTCCATCGCCTCGGCGCGGGACAACGCTC
GCGACAACAAGCTCCCTAACACTGGATTCGCCGCCGCAGACGCAGCCACG
CTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATTGA
CCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGCTGCTGGCCT
TTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGGCG
CGCGACGTGGCTGTCATGGTGCAAGGCGATGCGGAGAAGAAGATCCGGTA
CGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACATG
TTGAAGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:747539..749138-

>CAN33_43445-T1 ID=CAN33_43445-T1|Name=CAN33_43445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3090bp|location=Sequence derived from alignment at NKJJ01000022.1:747539..749138- (Aspergillus niger FDAARGOS_311)
AACCGACGCATGGATTTGGATATCGAAGACTGCCCCTTGGGCACCGACAT
TGTCCGACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTG
GCAAGTACACCAAAGGTGCCACCCTTCTCATGCGCGAATCCACCAGCCGC
GTGCCGAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCC
CGGACAGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTG
AAGAGAAGCGCTGCGTGACTGACTCGAACGCCACCAGCATCGAATATGTC
GACGACTACGTCTTCACCAACAAAGCCGGCGCGTTCTTCCAGAACAACAA
CTCCATCCTATCTGGATTCACCGAGTTCATCCGCCAACACGCTATGCCCC
CGAACAACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTAC
TCCGGCTCCGGTCTCTTCACCATCACCCTCTCCCCGCTCTTCAAGTCCAG
TCTGGGCGTCGATGTTGCCGGCGACTCCATCGCCTCGGCGCGGGACAACG
CTCGCGACAACAAGCTCCCTAACACTGGATTCGCCGCCGCAGACGCAGCC
ACGCTTTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGAT
TGACCCCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGCTGCTGG
CCTTTGGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAG
GCGCGCGACGTGGCTGTCATGGTGCAAGGCGATGCGGAGAAGAAGATCCG
GTACGAGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGAC
ATGTTGAAGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCC
TAGATGCAGAATTCCCCCAAGAAGCCCGACACCGTCGCAAAGCGGCGCAA
GAGAGTCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTTGACGAGGTCC
TCCAGACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAG
CTCGAGACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCC
TTTCACCGAAATTGAAGTTCAGGTCGCTGATGTATCATCAACGGGTGATG
GTTTAGCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACA
GTCCCCGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCT
GTCCTACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGC
GCAACGATGCCGGCATTGGTTGCCAGTATTTTGGTCGGTGCTCGGGATGC
CAGCTGCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCAT
CGTGGAGAAGGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTC
CCGCCATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACA
AAGCTCACGCCGCACTTTGCAGCCCCTGGCGGAAACAAGAGGAGGAACCG
ACGCATGGATTTGGATATCGAAGACTGCCCCTTGGGCACCGACATTGTCC
GACAGGGATTAAAGAGCGAGCGCAAGCGCGTGGCCGAGACCATTGGCAAG
TACACCAAAGGTGCCACCCTTCTCATGCGCGAATCCACCAGCCGCGTGCC
GAAAGAGCAGGACAGCGAGAACCCTCCTGCGCCCATCAACAAGCCCGGAC
AGGATTCCGGCGACGTCATCCGCATCGAAAAGGATACCTACATTGAAGAG
AAGCGCTGCGTGACTGACTCGAACGCCACCAGCATCGAATATGTCGACGA
CTACGTCTTCACCAACAAAGCCGGCGCGTTCTTCCAGAACAACAACTCCA
TCCTATCTGGATTCACCGAGTTCATCCGCCAACACGCTATGCCCCCGAAC
AACGACCAAGACGCCAAACCCATCAAATACCTTCTGGATGCCTACTCCGG
CTCCGGTCTCTTCACCATCACCCTCTCCCCGCTCTTCAAGTCCAGTCTGG
GCGTCGATGTTGCCGGCGACTCCATCGCCTCGGCGCGGGACAACGCTCGC
GACAACAAGCTCCCTAACACTGGATTCGCCGCCGCAGACGCAGCCACGCT
TTTCAAGGACGTGCCCTACCCTCCTGACCAGACTCTGCTGGTGATTGACC
CCCCGCGCAAGGGATGCAGTGACGACTTTCTCCGGCAGCTGCTGGCCTTT
GGACCGCGCCGGGTGGTCTACGTCAGCTGCAACGTGCACACACAGGCGCG
CGACGTGGCTGTCATGGTGCAAGGCGATGCGGAGAAGAAGATCCGGTACG
AGATCGAGAGCATCCGGGGATTCGACTTCTTCCCGCAGACGGGACATGTT
GAAGGAGTTGCTATTCTGAACAAGACGAGTATACCCGAGTCTGCCTAGAT
GCAGAATTCCCCCAAGAAGCCCGACACCGTCGCAAAGCGGCGCAAGAGAG
TCAAGGCTCCCCGCGATAACAAGAGCAGTGGTTTTGACGAGGTCCTCCAG
ACCGACATTGATCAGCTCCTCCGCAGACACAAGCCCGAAACCGAGCTCGA
GACAGAAGACGCTTCCACGCCCCCGCAACCCACCCTCCCCGAGCCTTTCA
CCGAAATTGAAGTTCAGGTCGCTGATGTATCATCAACGGGTGATGGTTTA
GCATTGTCCGAGAACCAGGATCATGTCTACGTCGTTCCCTTCACAGTCCC
CGGCGACAAGGTTCTGGTCAAGGTGGTGCGGCACTTCCCCTCTCTGTCCT
ACAGCATGACGGACTTCATCAAGGTCATTGAGCCTGGCCCTAAGCGCAAC
GATGCCGGCATTGGTTGCCAGTATTTTGGTCGGTGCTCGGGATGCCAGCT
GCAGATGATGTCCTACGAAGACCAGCTCGCCCACAAGAAGCGCATCGTGG
AGAAGGCCTACGCCAACTTCTCTGGTTTGATTCCAGAGTTGATTCCCGCC
ATCGACGACACTTTCCCATCTCCGCTGCAATACGGCTACCGGACAAAGCT
CACGCCGCACTTTGCAGCCCCTGGCGGAAACAAGAGGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0030697S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
GO:0008173RNA methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_43445CAN33_43445Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43445-T1CAN33_43445-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43445-T1.cdsCAN33_43445-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43445-T1.exon2CAN33_43445-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43445-T1.exon1CAN33_43445-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR025795
DBxrefInterPro:IPR002792
DBxrefInterPro:IPR030390
DBxrefInterPro:IPR030391
DBxrefInterPro:IPR010280
ProducttRNA (Uracil-5-)-methyltransferase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:747539..749138 -
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