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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:852323..854090- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_43635-T1 ID=CAN33_43635-T1|Name=CAN33_43635-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1768bp|location=Sequence derived from alignment at NKJJ01000022.1:852323..854090- (Aspergillus niger FDAARGOS_311)
ATGGCTGCTGCTCGCGATGATCTCCGGAGCTCGATGGACGTTGACACCAA
CGATCCCCGCCTCGGCTCTCCCTCTGCCACCAACGGTGTGAATGGCACTC
ACACGGAGAAGAGTCCGACCCCGCCCCCTCACCGGTCCAATGGAAACACC
GCCGAGGCCGACTCCTTCAAGCTGGCAGGAAACAAGTTTTTCAAGGATGG
CAACTATGCCCGCGCCATTGAGGAATTCACCAAGGGTAGGTTTAATACCT
GATTCTGCCGGACAATCTTCTGCAGTGTTAGTAACAATGGTACAGCTCTC
GAGATTAGCCCCAACTCGTCCGTCTACCTGTCCAACCGGGCTGCAGCATA
CATGGCGGCCAACCAATATCTCGCTGCTCTGGAGGACTGCGAACGGGCCT
GCGAGCTCGACCCCACCAACACTAAGATCATGTACCGGTTGGCCCGTATC
CTGACCAGCTTGGGCCGTCCGACGGAGGCTCTTGACGTGCTGTCTCGTAT
CGAGCCCCCGGCCTCCGCTACTGACCGTGCGGCCGCAGAGAAGATGCTCC
GCTTCGTCAGCCAGGCGGAGGAGGCTCTTTCGCAGGATCGTGGTGTCTCA
ATGGTGCTGTTCTGCCTCGACCAGGCCCGTCAGCTCCTCGGACAAGGCGT
CAAGGAGCCCCGCAAGTGGACGCTGATGACTGCAGAGGCCCAGTTGAAGA
TGGGCAACGACAACTCGTACGGCAAGGCACAGGACATTGCTATCAGCATG
CTCCGCGTGAACAGCCAGGACCCTGATGCGCTGATGATCCGCGCCCGGGC
CTTCTACGGTATGGGTGACACGGAGCAGGCGCTGAAGCTGCTGAAGATGT
GTCTGGGTCTGGATCCCGATATGAAGGCGGCGATCAAGCTGCTGCGGACT
GTGCAGAAGCTGGTACGCACCAAGGAAGAGGGTAACACGGCATTCAAGGC
CAAGGACTACCGTCGCGCCATCGACCTGTGGGGTGAGGCGCTGACGGTGG
ACCCGAAGAACAAGGACCAGAACGCCAAGATCCTGCAGAACCGGGCGCAG
GCATACATCAACCTGAAGGAGTACGACAGCGCAGTGGCAGACTGCAACGA
GGCCCTGCGGCTGGACCCCGGGTACCTCAAGGCGCAGAAGATGCGCGCCA
AGGCGCATGGCGGTGCCGGAAACTGGGAAGAAGCTGTGCGCGACTACAAG
GCGGTGGCGGAGTCGAACCCGACCGAGAAGGGCATCCAAGAGGAAATCCG
TCGGGCCGAGTTTGAGCTGAAGAAGGCGCAGCGCAAGGATTACTACAAGA
TCCTCGGAGTGTCCAAGGACGCGGGCGAGCAAGAGATCAAGAAGGCGTAC
CGCAAGATGGCGATCCAGTACCACCCGGACAAGAACCGGGACGGGGATGC
GGGTGACGAGAAGTTCAAGGAGATTGGTGAGGCGTACGAGACTTTGAGTG
ATCCTCAGTAAGTTCATCCTTTGATGTGGTGATGAGTGGCTTTCGCTAAC
CAAGCATAGGAAACGTGCTGCCTACGACAACGGCGATGACCTGATGGACC
CAGCTGACATGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGA
GGCATGGGCGGTATGGGCGGTATGGGAGGAATGGGTGGTATGGGTGGTAT
GGGAGGAACCCATATCAACATCGACCCCAGCGTGCTGTTCAACATGATGA
ACGGCGGCGGCGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTCCCC
GGCGGATTTCCCTTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:852323..854090- >CAN33_43635-T1 ID=CAN33_43635-T1|Name=CAN33_43635-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4968bp|location=Sequence derived from alignment at NKJJ01000022.1:852323..854090- (Aspergillus niger FDAARGOS_311)
GAAACGTGCTGCCTACGACAACGGCGATGACCTGATGGACCCAGCTGACA
TGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGAGGCATGGGC
GGTATGGGCGGTATGGGAGGAATGGGTGGTATGGGTGGTATGGGAGGAAC
CCATATCAACATCGACCCCAGCGTGCTGTTCAACATGATGAACGGCGGCG
GCGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTCCCCGGCGGATTT
CCCTTTTAGCTCTCGAGATTAGCCCCAACTCGTCCGTCTACCTGTCCAAC
CGGGCTGCAGCATACATGGCGGCCAACCAATATCTCGCTGCTCTGGAGGA
CTGCGAACGGGCCTGCGAGCTCGACCCCACCAACACTAAGATCATGTACC
GGTTGGCCCGTATCCTGACCAGCTTGGGCCGTCCGACGGAGGCTCTTGAC
GTGCTGTCTCGTATCGAGCCCCCGGCCTCCGCTACTGACCGTGCGGCCGC
AGAGAAGATGCTCCGCTTCGTCAGCCAGGCGGAGGAGGCTCTTTCGCAGG
ATCGTGGTGTCTCAATGGTGCTGTTCTGCCTCGACCAGGCCCGTCAGCTC
CTCGGACAAGGCGTCAAGGAGCCCCGCAAGTGGACGCTGATGACTGCAGA
GGCCCAGTTGAAGATGGGCAACGACAACTCGTACGGCAAGGCACAGGACA
TTGCTATCAGCATGCTCCGCGTGAACAGCCAGGACCCTGATGCGCTGATG
ATCCGCGCCCGGGCCTTCTACGGTATGGGTGACACGGAGCAGGCGCTGAA
GCTGCTGAAGATGTGTCTGGGTCTGGATCCCGATATGAAGGCGGCGATCA
AGCTGCTGCGGACTGTGCAGAAGCTGGTACGCACCAAGGAAGAGGGTAAC
ACGGCATTCAAGGCCAAGGACTACCGTCGCGCCATCGACCTGTGGGGTGA
GGCGCTGACGGTGGACCCGAAGAACAAGGACCAGAACGCCAAGATCCTGC
AGAACCGGGCGCAGGCATACATCAACCTGAAGGAGTACGACAGCGCAGTG
GCAGACTGCAACGAGGCCCTGCGGCTGGACCCCGGGTACCTCAAGGCGCA
GAAGATGCGCGCCAAGGCGCATGGCGGTGCCGGAAACTGGGAAGAAGCTG
TGCGCGACTACAAGGCGGTGGCGGAGTCGAACCCGACCGAGAAGGGCATC
CAAGAGGAAATCCGTCGGGCCGAGTTTGAGCTGAAGAAGGCGCAGCGCAA
GGATTACTACAAGATCCTCGGAGTGTCCAAGGACGCGGGCGAGCAAGAGA
TCAAGAAGGCGTACCGCAAGATGGCGATCCAGTACCACCCGGACAAGAAC
CGGGACGGGGATGCGGGTGACGAGAAGTTCAAGGAGATTGGTGAGGCGTA
CGAGACTTTGAGTGATCCTCAATGGCTGCTGCTCGCGATGATCTCCGGAG
CTCGATGGACGTTGACACCAACGATCCCCGCCTCGGCTCTCCCTCTGCCA
CCAACGGTGTGAATGGCACTCACACGGAGAAGAGTCCGACCCCGCCCCCT
CACCGGTCCAATGGAAACACCGCCGAGGCCGACTCCTTCAAGCTGGCAGG
AAACAAGTTTTTCAAGGATGGCAACTATGCCCGCGCCATTGAGGAATTCA
CCAAGGGAAACGTGCTGCCTACGACAACGGCGATGACCTGATGGACCCAG
CTGACATGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGAGGC
ATGGGCGGTATGGGCGGTATGGGAGGAATGGGTGGTATGGGTGGTATGGG
AGGAACCCATATCAACATCGACCCCAGCGTGCTGTTCAACATGATGAACG
GCGGCGGCGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTCCCCGGC
GGATTTCCCTTTTAGCTCTCGAGATTAGCCCCAACTCGTCCGTCTACCTG
TCCAACCGGGCTGCAGCATACATGGCGGCCAACCAATATCTCGCTGCTCT
GGAGGACTGCGAACGGGCCTGCGAGCTCGACCCCACCAACACTAAGATCA
TGTACCGGTTGGCCCGTATCCTGACCAGCTTGGGCCGTCCGACGGAGGCT
CTTGACGTGCTGTCTCGTATCGAGCCCCCGGCCTCCGCTACTGACCGTGC
GGCCGCAGAGAAGATGCTCCGCTTCGTCAGCCAGGCGGAGGAGGCTCTTT
CGCAGGATCGTGGTGTCTCAATGGTGCTGTTCTGCCTCGACCAGGCCCGT
CAGCTCCTCGGACAAGGCGTCAAGGAGCCCCGCAAGTGGACGCTGATGAC
TGCAGAGGCCCAGTTGAAGATGGGCAACGACAACTCGTACGGCAAGGCAC
AGGACATTGCTATCAGCATGCTCCGCGTGAACAGCCAGGACCCTGATGCG
CTGATGATCCGCGCCCGGGCCTTCTACGGTATGGGTGACACGGAGCAGGC
GCTGAAGCTGCTGAAGATGTGTCTGGGTCTGGATCCCGATATGAAGGCGG
CGATCAAGCTGCTGCGGACTGTGCAGAAGCTGGTACGCACCAAGGAAGAG
GGTAACACGGCATTCAAGGCCAAGGACTACCGTCGCGCCATCGACCTGTG
GGGTGAGGCGCTGACGGTGGACCCGAAGAACAAGGACCAGAACGCCAAGA
TCCTGCAGAACCGGGCGCAGGCATACATCAACCTGAAGGAGTACGACAGC
GCAGTGGCAGACTGCAACGAGGCCCTGCGGCTGGACCCCGGGTACCTCAA
GGCGCAGAAGATGCGCGCCAAGGCGCATGGCGGTGCCGGAAACTGGGAAG
AAGCTGTGCGCGACTACAAGGCGGTGGCGGAGTCGAACCCGACCGAGAAG
GGCATCCAAGAGGAAATCCGTCGGGCCGAGTTTGAGCTGAAGAAGGCGCA
GCGCAAGGATTACTACAAGATCCTCGGAGTGTCCAAGGACGCGGGCGAGC
AAGAGATCAAGAAGGCGTACCGCAAGATGGCGATCCAGTACCACCCGGAC
AAGAACCGGGACGGGGATGCGGGTGACGAGAAGTTCAAGGAGATTGGTGA
GGCGTACGAGACTTTGAGTGATCCTCAATGGCTGCTGCTCGCGATGATCT
CCGGAGCTCGATGGACGTTGACACCAACGATCCCCGCCTCGGCTCTCCCT
CTGCCACCAACGGTGTGAATGGCACTCACACGGAGAAGAGTCCGACCCCG
CCCCCTCACCGGTCCAATGGAAACACCGCCGAGGCCGACTCCTTCAAGCT
GGCAGGAAACAAGTTTTTCAAGGATGGCAACTATGCCCGCGCCATTGAGG
AATTCACCAAGGGAAACGTGCTGCCTACGACAACGGCGATGACCTGATGG
ACCCAGCTGACATGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATG
GGAGGCATGGGCGGTATGGGCGGTATGGGAGGAATGGGTGGTATGGGTGG
TATGGGAGGAACCCATATCAACATCGACCCCAGCGTGCTGTTCAACATGA
TGAACGGCGGCGGCGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTC
CCCGGCGGATTTCCCTTTTAGCTCTCGAGATTAGCCCCAACTCGTCCGTC
TACCTGTCCAACCGGGCTGCAGCATACATGGCGGCCAACCAATATCTCGC
TGCTCTGGAGGACTGCGAACGGGCCTGCGAGCTCGACCCCACCAACACTA
AGATCATGTACCGGTTGGCCCGTATCCTGACCAGCTTGGGCCGTCCGACG
GAGGCTCTTGACGTGCTGTCTCGTATCGAGCCCCCGGCCTCCGCTACTGA
CCGTGCGGCCGCAGAGAAGATGCTCCGCTTCGTCAGCCAGGCGGAGGAGG
CTCTTTCGCAGGATCGTGGTGTCTCAATGGTGCTGTTCTGCCTCGACCAG
GCCCGTCAGCTCCTCGGACAAGGCGTCAAGGAGCCCCGCAAGTGGACGCT
GATGACTGCAGAGGCCCAGTTGAAGATGGGCAACGACAACTCGTACGGCA
AGGCACAGGACATTGCTATCAGCATGCTCCGCGTGAACAGCCAGGACCCT
GATGCGCTGATGATCCGCGCCCGGGCCTTCTACGGTATGGGTGACACGGA
GCAGGCGCTGAAGCTGCTGAAGATGTGTCTGGGTCTGGATCCCGATATGA
AGGCGGCGATCAAGCTGCTGCGGACTGTGCAGAAGCTGGTACGCACCAAG
GAAGAGGGTAACACGGCATTCAAGGCCAAGGACTACCGTCGCGCCATCGA
CCTGTGGGGTGAGGCGCTGACGGTGGACCCGAAGAACAAGGACCAGAACG
CCAAGATCCTGCAGAACCGGGCGCAGGCATACATCAACCTGAAGGAGTAC
GACAGCGCAGTGGCAGACTGCAACGAGGCCCTGCGGCTGGACCCCGGGTA
CCTCAAGGCGCAGAAGATGCGCGCCAAGGCGCATGGCGGTGCCGGAAACT
GGGAAGAAGCTGTGCGCGACTACAAGGCGGTGGCGGAGTCGAACCCGACC
GAGAAGGGCATCCAAGAGGAAATCCGTCGGGCCGAGTTTGAGCTGAAGAA
GGCGCAGCGCAAGGATTACTACAAGATCCTCGGAGTGTCCAAGGACGCGG
GCGAGCAAGAGATCAAGAAGGCGTACCGCAAGATGGCGATCCAGTACCAC
CCGGACAAGAACCGGGACGGGGATGCGGGTGACGAGAAGTTCAAGGAGAT
TGGTGAGGCGTACGAGACTTTGAGTGATCCTCAATGGCTGCTGCTCGCGA
TGATCTCCGGAGCTCGATGGACGTTGACACCAACGATCCCCGCCTCGGCT
CTCCCTCTGCCACCAACGGTGTGAATGGCACTCACACGGAGAAGAGTCCG
ACCCCGCCCCCTCACCGGTCCAATGGAAACACCGCCGAGGCCGACTCCTT
CAAGCTGGCAGGAAACAAGTTTTTCAAGGATGGCAACTATGCCCGCGCCA
TTGAGGAATTCACCAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR018253 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR001440 |
| DBxref | InterPro:IPR036869 |
| DBxref | InterPro:IPR019734 |
| DBxref | InterPro:IPR001623 |
| DBxref | PFAM:PF13181 |
| DBxref | PFAM:PF13174 |
| DBxref | PFAM:PF07719 |
| DBxref | PFAM:PF14559 |
| DBxref | PFAM:PF13432 |
| DBxref | PFAM:PF00515 |
| DBxref | PFAM:PF00226 |
| DBxref | PFAM:PF12895 |
| Product | TPR repeat family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:852323..854090 - |
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