You are here

Home

CAN33_43950-T1, CAN33_43950-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43950-T1
Unique NameCAN33_43950-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1052522..1054356-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43950-T1 ID=CAN33_43950-T1|Name=CAN33_43950-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1835bp|location=Sequence derived from alignment at NKJJ01000022.1:1052522..1054356- (Aspergillus niger FDAARGOS_311)
ATGGACACAGAGAGCAGCCATGCGCAGGAACATGATTTCGCGCAAACTTC
CTGGCTTGATATAGGTGGATTCAGTCCCTCCGAGCAATCTCCAACGCTGG
ATTATCAAGCATTTGGATACGGAGTCGTACCACTAGACCCGTCCTATGGC
GTCGATATCCCTCCACCTTATGAGACATTACCAATAGCCATGCCTCCACC
CCCGAGTTCCTGGCCTAGTATGCTTTCGAATCAAGGGCCGTTCCCAGAAC
CGGGCATGCCAGCTGTACCCTTGATGCAGGCACCACCCACACTTGCCCCA
GTGCCAACCATTCCAGCAATCCCTCGCAAGGCTTCCACTAGCAAGGCATC
TACCGGCAAGTCGAGCACCGGCAAATCATCCACCGGCAAGTCGTCCAGTG
GAAAGTCGAATAGCAACCCAACGCCACGCAGGACTCTCACGGATGAAGAC
CGTCGGCGGATGTGTCTTTATCACGAGGAGAATAAGACAGCCAAGCAAAC
AGACATTGGAGGTAAAGCGTTCTCTGATCCCACTGAGGGAAGATTCTTCA
GACTAATCAGTGCGATTTGCAGCATTATTCGGTGTCGAGAGAAGGTATAG
TTATTCTTCTTGAATCCCCATCTCCCCGGATACCCGTCTAACTGACATTG
TTTTCTGTTCAAAGTACTGTTTCAAAGGTCCTGCGGCAGAAAGATAAGTA
TCTTAATCCGGACGATGGCAGTCGATCTCCTATCAAAAGGGCCAAAGGAA
GAGTCCCAGATATCGAGAAGGCTTTGTCTAATTGGGCGCGGAACTATCAA
AAACAGGGCTATCCGTTGAACGATGAGATGATACGTGAGAAGGCCCTTTT
CTTTGCTAGTACTTGTGGCAGTTCAGATGGCAAGGAGAAGGTGCTCAGTA
CAAGTTGGTTGGAGAAATTTAAACGCAAGTATAACTTGATGGGTGCAAGG
AATCGCAAGGGCTCCTGGACCAGCACAAAGAGCGAATCGGATAGCCCTAC
TTGTTTAAGCATTGATTCAGCACTGGCATCTGCCGTCCAGTCGCCCACGT
TGCTCTCGCCTACATCCCCAACAGGCTTTCTATCACCATTGCCATTATCG
CCCGTCCAGAGCAATGAGAACATCAGGGGCGAGCTTGTTCAGAGTCTCGC
AGAAATTGCCAGTGACTATCAACACACGCATACCAAGAGTACAACATCGC
TGGACACAACATGCTCTTTCTCTGCTGGGCTCACCAGCCCGACATCCACT
TTCGTGACGGAAAGTCCATTCACTCCTACTAGCCAGTCTCTTGGTTCATC
CGCGGACGGCAATTCCACCAGACCACGCAGCCAAACATTTCCGCTCAGTT
CGTCTGACCCGAGTCTTATGGCCACTGACGAAAACTCCGAGCATTTGACA
AAAGCCGCGCTACGACAGGCACTCTCAGTCTCAGAACATCAATCTTCCCC
TGACGACCATCACGATCAGAAAATTCTCCCAGCGCTTGACACGTCGGCGA
ATACAATCAAACGCAATCGCAGCAACCCGGAGTTTAAAGCCAAGTCCATA
TACCCACCGTTGTTCTCAAAGTCGAACACTGTGTCTCCAGTTAGCTCCCC
GGGTTCGCCAACCCAGGATGAAGCTAGGAGAGCACTAGAACTTGTGATGA
ACTACTTTAAACAGCAGCCTTCAGGACTTGGGGCAGACGATTATATGACA
ATTGGGAAGCTGATGGAAAGGCTTGAGCTCGCCAAGGCACAGCAAGTGAC
ACTCCCAGGGGGCCTCACTCGAATCGACGAACACGATGATTCGCCACAAC
TGAACAGGAAGAGAAGTATCCACAGTCTTGGCTAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000022.1:1052522..1054356-

>CAN33_43950-T1 ID=CAN33_43950-T1|Name=CAN33_43950-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5112bp|location=Sequence derived from alignment at NKJJ01000022.1:1052522..1054356- (Aspergillus niger FDAARGOS_311)
TACTGTTTCAAAGGTCCTGCGGCAGAAAGATAAGTATCTTAATCCGGACG
ATGGCAGTCGATCTCCTATCAAAAGGGCCAAAGGAAGAGTCCCAGATATC
GAGAAGGCTTTGTCTAATTGGGCGCGGAACTATCAAAAACAGGGCTATCC
GTTGAACGATGAGATGATACGTGAGAAGGCCCTTTTCTTTGCTAGTACTT
GTGGCAGTTCAGATGGCAAGGAGAAGGTGCTCAGTACAAGTTGGTTGGAG
AAATTTAAACGCAAGTATAACTTGATGGGTGCAAGGAATCGCAAGGGCTC
CTGGACCAGCACAAAGAGCGAATCGGATAGCCCTACTTGTTTAAGCATTG
ATTCAGCACTGGCATCTGCCGTCCAGTCGCCCACGTTGCTCTCGCCTACA
TCCCCAACAGGCTTTCTATCACCATTGCCATTATCGCCCGTCCAGAGCAA
TGAGAACATCAGGGGCGAGCTTGTTCAGAGTCTCGCAGAAATTGCCAGTG
ACTATCAACACACGCATACCAAGAGTACAACATCGCTGGACACAACATGC
TCTTTCTCTGCTGGGCTCACCAGCCCGACATCCACTTTCGTGACGGAAAG
TCCATTCACTCCTACTAGCCAGTCTCTTGGTTCATCCGCGGACGGCAATT
CCACCAGACCACGCAGCCAAACATTTCCGCTCAGTTCGTCTGACCCGAGT
CTTATGGCCACTGACGAAAACTCCGAGCATTTGACAAAAGCCGCGCTACG
ACAGGCACTCTCAGTCTCAGAACATCAATCTTCCCCTGACGACCATCACG
ATCAGAAAATTCTCCCAGCGCTTGACACGTCGGCGAATACAATCAAACGC
AATCGCAGCAACCCGGAGTTTAAAGCCAAGTCCATATACCCACCGTTGTT
CTCAAAGTCGAACACTGTGTCTCCAGTTAGCTCCCCGGGTTCGCCAACCC
AGGATGAAGCTAGGAGAGCACTAGAACTTGTGATGAACTACTTTAAACAG
CAGCCTTCAGGACTTGGGGCAGACGATTATATGACAATTGGGAAGCTGAT
GGAAAGGCTTGAGCTCGCCAAGGCACAGCAAGTGACACTCCCAGGGGGCC
TCACTCGAATCGACGAACACGATGATTCGCCACAACTGAACAGGAAGAGA
AGTATCCACAGTCTTGGCTAGCATTATTCGGTGTCGAGAGAAGATGGACA
CAGAGAGCAGCCATGCGCAGGAACATGATTTCGCGCAAACTTCCTGGCTT
GATATAGGTGGATTCAGTCCCTCCGAGCAATCTCCAACGCTGGATTATCA
AGCATTTGGATACGGAGTCGTACCACTAGACCCGTCCTATGGCGTCGATA
TCCCTCCACCTTATGAGACATTACCAATAGCCATGCCTCCACCCCCGAGT
TCCTGGCCTAGTATGCTTTCGAATCAAGGGCCGTTCCCAGAACCGGGCAT
GCCAGCTGTACCCTTGATGCAGGCACCACCCACACTTGCCCCAGTGCCAA
CCATTCCAGCAATCCCTCGCAAGGCTTCCACTAGCAAGGCATCTACCGGC
AAGTCGAGCACCGGCAAATCATCCACCGGCAAGTCGTCCAGTGGAAAGTC
GAATAGCAACCCAACGCCACGCAGGACTCTCACGGATGAAGACCGTCGGC
GGATGTGTCTTTATCACGAGGAGAATAAGACAGCCAAGCAAACAGACATT
GGAGTACTGTTTCAAAGGTCCTGCGGCAGAAAGATAAGTATCTTAATCCG
GACGATGGCAGTCGATCTCCTATCAAAAGGGCCAAAGGAAGAGTCCCAGA
TATCGAGAAGGCTTTGTCTAATTGGGCGCGGAACTATCAAAAACAGGGCT
ATCCGTTGAACGATGAGATGATACGTGAGAAGGCCCTTTTCTTTGCTAGT
ACTTGTGGCAGTTCAGATGGCAAGGAGAAGGTGCTCAGTACAAGTTGGTT
GGAGAAATTTAAACGCAAGTATAACTTGATGGGTGCAAGGAATCGCAAGG
GCTCCTGGACCAGCACAAAGAGCGAATCGGATAGCCCTACTTGTTTAAGC
ATTGATTCAGCACTGGCATCTGCCGTCCAGTCGCCCACGTTGCTCTCGCC
TACATCCCCAACAGGCTTTCTATCACCATTGCCATTATCGCCCGTCCAGA
GCAATGAGAACATCAGGGGCGAGCTTGTTCAGAGTCTCGCAGAAATTGCC
AGTGACTATCAACACACGCATACCAAGAGTACAACATCGCTGGACACAAC
ATGCTCTTTCTCTGCTGGGCTCACCAGCCCGACATCCACTTTCGTGACGG
AAAGTCCATTCACTCCTACTAGCCAGTCTCTTGGTTCATCCGCGGACGGC
AATTCCACCAGACCACGCAGCCAAACATTTCCGCTCAGTTCGTCTGACCC
GAGTCTTATGGCCACTGACGAAAACTCCGAGCATTTGACAAAAGCCGCGC
TACGACAGGCACTCTCAGTCTCAGAACATCAATCTTCCCCTGACGACCAT
CACGATCAGAAAATTCTCCCAGCGCTTGACACGTCGGCGAATACAATCAA
ACGCAATCGCAGCAACCCGGAGTTTAAAGCCAAGTCCATATACCCACCGT
TGTTCTCAAAGTCGAACACTGTGTCTCCAGTTAGCTCCCCGGGTTCGCCA
ACCCAGGATGAAGCTAGGAGAGCACTAGAACTTGTGATGAACTACTTTAA
ACAGCAGCCTTCAGGACTTGGGGCAGACGATTATATGACAATTGGGAAGC
TGATGGAAAGGCTTGAGCTCGCCAAGGCACAGCAAGTGACACTCCCAGGG
GGCCTCACTCGAATCGACGAACACGATGATTCGCCACAACTGAACAGGAA
GAGAAGTATCCACAGTCTTGGCTAGCATTATTCGGTGTCGAGAGAAGATG
GACACAGAGAGCAGCCATGCGCAGGAACATGATTTCGCGCAAACTTCCTG
GCTTGATATAGGTGGATTCAGTCCCTCCGAGCAATCTCCAACGCTGGATT
ATCAAGCATTTGGATACGGAGTCGTACCACTAGACCCGTCCTATGGCGTC
GATATCCCTCCACCTTATGAGACATTACCAATAGCCATGCCTCCACCCCC
GAGTTCCTGGCCTAGTATGCTTTCGAATCAAGGGCCGTTCCCAGAACCGG
GCATGCCAGCTGTACCCTTGATGCAGGCACCACCCACACTTGCCCCAGTG
CCAACCATTCCAGCAATCCCTCGCAAGGCTTCCACTAGCAAGGCATCTAC
CGGCAAGTCGAGCACCGGCAAATCATCCACCGGCAAGTCGTCCAGTGGAA
AGTCGAATAGCAACCCAACGCCACGCAGGACTCTCACGGATGAAGACCGT
CGGCGGATGTGTCTTTATCACGAGGAGAATAAGACAGCCAAGCAAACAGA
CATTGGAGTACTGTTTCAAAGGTCCTGCGGCAGAAAGATAAGTATCTTAA
TCCGGACGATGGCAGTCGATCTCCTATCAAAAGGGCCAAAGGAAGAGTCC
CAGATATCGAGAAGGCTTTGTCTAATTGGGCGCGGAACTATCAAAAACAG
GGCTATCCGTTGAACGATGAGATGATACGTGAGAAGGCCCTTTTCTTTGC
TAGTACTTGTGGCAGTTCAGATGGCAAGGAGAAGGTGCTCAGTACAAGTT
GGTTGGAGAAATTTAAACGCAAGTATAACTTGATGGGTGCAAGGAATCGC
AAGGGCTCCTGGACCAGCACAAAGAGCGAATCGGATAGCCCTACTTGTTT
AAGCATTGATTCAGCACTGGCATCTGCCGTCCAGTCGCCCACGTTGCTCT
CGCCTACATCCCCAACAGGCTTTCTATCACCATTGCCATTATCGCCCGTC
CAGAGCAATGAGAACATCAGGGGCGAGCTTGTTCAGAGTCTCGCAGAAAT
TGCCAGTGACTATCAACACACGCATACCAAGAGTACAACATCGCTGGACA
CAACATGCTCTTTCTCTGCTGGGCTCACCAGCCCGACATCCACTTTCGTG
ACGGAAAGTCCATTCACTCCTACTAGCCAGTCTCTTGGTTCATCCGCGGA
CGGCAATTCCACCAGACCACGCAGCCAAACATTTCCGCTCAGTTCGTCTG
ACCCGAGTCTTATGGCCACTGACGAAAACTCCGAGCATTTGACAAAAGCC
GCGCTACGACAGGCACTCTCAGTCTCAGAACATCAATCTTCCCCTGACGA
CCATCACGATCAGAAAATTCTCCCAGCGCTTGACACGTCGGCGAATACAA
TCAAACGCAATCGCAGCAACCCGGAGTTTAAAGCCAAGTCCATATACCCA
CCGTTGTTCTCAAAGTCGAACACTGTGTCTCCAGTTAGCTCCCCGGGTTC
GCCAACCCAGGATGAAGCTAGGAGAGCACTAGAACTTGTGATGAACTACT
TTAAACAGCAGCCTTCAGGACTTGGGGCAGACGATTATATGACAATTGGG
AAGCTGATGGAAAGGCTTGAGCTCGCCAAGGCACAGCAAGTGACACTCCC
AGGGGGCCTCACTCGAATCGACGAACACGATGATTCGCCACAACTGAACA
GGAAGAGAAGTATCCACAGTCTTGGCTAGCATTATTCGGTGTCGAGAGAA
GATGGACACAGAGAGCAGCCATGCGCAGGAACATGATTTCGCGCAAACTT
CCTGGCTTGATATAGGTGGATTCAGTCCCTCCGAGCAATCTCCAACGCTG
GATTATCAAGCATTTGGATACGGAGTCGTACCACTAGACCCGTCCTATGG
CGTCGATATCCCTCCACCTTATGAGACATTACCAATAGCCATGCCTCCAC
CCCCGAGTTCCTGGCCTAGTATGCTTTCGAATCAAGGGCCGTTCCCAGAA
CCGGGCATGCCAGCTGTACCCTTGATGCAGGCACCACCCACACTTGCCCC
AGTGCCAACCATTCCAGCAATCCCTCGCAAGGCTTCCACTAGCAAGGCAT
CTACCGGCAAGTCGAGCACCGGCAAATCATCCACCGGCAAGTCGTCCAGT
GGAAAGTCGAATAGCAACCCAACGCCACGCAGGACTCTCACGGATGAAGA
CCGTCGGCGGATGTGTCTTTATCACGAGGAGAATAAGACAGCCAAGCAAA
CAGACATTGGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_43950CAN33_43950Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43950-T1CAN33_43950-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43950-T1.cdsCAN33_43950-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43950-T1.exon3CAN33_43950-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_43950-T1.exon2CAN33_43950-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43950-T1.exon1CAN33_43950-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR007889
DBxrefInterPro:IPR006600
DBxrefPFAM:PF03221
DBxrefPFAM:PF04218
ProductTc5 transposase DNA-binding domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1052522..1054356 -
Powered by Drupal