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CAN33_43990-T1, CAN33_43990-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_43990-T1
Unique NameCAN33_43990-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1087445..1087922-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_43990-T1 ID=CAN33_43990-T1|Name=CAN33_43990-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=478bp|location=Sequence derived from alignment at NKJJ01000022.1:1087445..1087922- (Aspergillus niger FDAARGOS_311)
ATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGGTGAGAA
TACCCCATCGAAGTCCCTATTTTAAATCACTGGAGAAATTGAATCCATCT
AACCTGCATACCTACAGGCCCGAACATCGTCCCGTACGTCGTCGCATTTA
TTCCCTTTCCTTCCCTACCTTTCACGAAAGGCACATCACTACCCAATCCC
TATACAATACCGCCACATATCAATTGCAACCGCTACTCGACACATTCTCT
ACTGGAAACTGGAAATAAAATACTAATAAAAGCTATGATAGTCTCCCTCT
CCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGCAGA
AGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGGTC
CACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATGGTCGG
CAGGAAGTTGGGGGAGTTTGTTGCGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1087445..1087922-

>CAN33_43990-T1 ID=CAN33_43990-T1|Name=CAN33_43990-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=738bp|location=Sequence derived from alignment at NKJJ01000022.1:1087445..1087922- (Aspergillus niger FDAARGOS_311)
TCTCCCTCTCCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCA
AGACGCAGAAGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAG
TTCCAGGTCCACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGA
GATGGTCGGCAGGAAGTTGGGGGAGTTTGTTGCGTGAGCCCGAACATCGT
CCCATGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGTCTC
CCTCTCCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGAC
GCAGAAGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCC
AGGTCCACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATG
GTCGGCAGGAAGTTGGGGGAGTTTGTTGCGTGAGCCCGAACATCGTCCCA
TGTTTCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGGTCTCCCTC
TCCCCCGCAAACTCCCCGCTCCGCCAGGAACACCACCGATCAAGACGCAG
AAGCGCGGCGCCACGATCCTGCCTAACTTCGTGGGATTGAAGTTCCAGGT
CCACAATGGGAAGATTTATCAGGATGTTGTGATCACGGAGGAGATGGTCG
GCAGGAAGTTGGGGGAGTTTGTTGCGTGAGCCCGAACATCGTCCCATGTT
TCCCACGCGAGCTCTCTTCTCCCGCTCGGTCTGGAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM19CAN33_43990Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43990-T1CAN33_43990-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43990-T1.cdsCAN33_43990-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_43990-T1.exon3CAN33_43990-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_43990-T1.exon2CAN33_43990-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_43990-T1.exon1CAN33_43990-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR023575
DBxrefInterPro:IPR002222
DBxrefPFAM:PF00203
Productmitochondrial ribosomal small subunit component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1087445..1087922 -
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