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CAN33_44050-T1, CAN33_44050-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44050-T1
Unique NameCAN33_44050-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1122326..1123375+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44050-T1 ID=CAN33_44050-T1|Name=CAN33_44050-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1050bp|location=Sequence derived from alignment at NKJJ01000022.1:1122326..1123375+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCTCCCACATCAGGCTCATCGGCCGCCGCCAAGCCGTTCGAGTA
AGTCACCTACTTCACAACCAGGAAGTCCTAGTCCTTTGGATCACTAATAT
ATCTTCTTTCTAGCATTGTCGCGACATACAATGACTTGCTCCGCTCCGAT
CCAGACCTCACTATGCCAATTGCAGCTATCGAAGCTCTGGTACTACTCCT
TACAAACTCTCCCTCCTCGACGATATCCGAGACGCTCGACCTTCTCGAGA
AATCCACTGCACACCTGAAACAGTCGATCCCGAACCCCATTGGTCTCTCT
GCTGGAACCGACCTCTTCCAGCGATACCTGATTACTACCCTGCAGAGACC
CGGACAGCTCGGGCCCGCAGGTGATTTCAACGCGATCAGGGCGCATCTTC
TGTCGAACGGACGGTTGTTTATCAGACGTGCGAAAGAGAGTCGGGACAAG
ATCGCGGCGTTTGGACGAGGCTTTGTACGCGATGGAAGCACGGTTCTGAC
GAATGGAGGATCACGAGTTGTCGCTTCGTTGCTACAGAAGGCCGCGGACG
AGAAGGGCGGCCCGTCAGCCGTGCGGTTCAAGGTGATCTATGTCCTGTCA
TCGGCGAAGGGGACTGGCGCGCATCCCGATGAGCCGGAGGGTATGGAGAC
TGTGCGCGCTCTCCGGGCGAAGGGTGTTCCTGTCGCTACGATCCCGGAGT
CGGCTGTTGCCTACTCGATGGGCAAGGCCGATACTGTCATCGTTGGTGCC
GAGGGTGTGGTTGAAAACGGTGGTATCGTGTCGCGCATGGGAACCTACCA
GATCGGTCTTCTTGCGAAGGCTATGGGCAAACCCTTTTACGTTGTGGCGG
AGAGCCACAAGTTCGTCCGTATCTACCCGCTCAGCCAGTATGATTTGCCT
ATTGAGCAGCGCGTGATCGATTTCAAGACTGAAGAAGATGTCGCCGACGA
GGCGAAGCAACAGCAAGCTTTGTCTACGGATACAGTCGATGCCAAGGCCG
TCAACACGGCGGACAGCGCTGATGTAGTTGACTTCACTCCCCCCATCTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1122326..1123375+

>CAN33_44050-T1 ID=CAN33_44050-T1|Name=CAN33_44050-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1968bp|location=Sequence derived from alignment at NKJJ01000022.1:1122326..1123375+ (Aspergillus niger FDAARGOS_311)
ATGGCAGCTCCCACATCAGGCTCATCGGCCGCCGCCAAGCCGTTCGACAT
TGTCGCGACATACAATGACTTGCTCCGCTCCGATCCAGACCTCACTATGC
CAATTGCAGCTATCGAAGCTCTGGTACTACTCCTTACAAACTCTCCCTCC
TCGACGATATCCGAGACGCTCGACCTTCTCGAGAAATCCACTGCACACCT
GAAACAGTCGATCCCGAACCCCATTGGTCTCTCTGCTGGAACCGACCTCT
TCCAGCGATACCTGATTACTACCCTGCAGAGACCCGGACAGCTCGGGCCC
GCAGGTGATTTCAACGCGATCAGGGCGCATCTTCTGTCGAACGGACGGTT
GTTTATCAGACGTGCGAAAGAGAGTCGGGACAAGATCGCGGCGTTTGGAC
GAGGCTTTGTACGCGATGGAAGCACGGTTCTGACGAATGGAGGATCACGA
GTTGTCGCTTCGTTGCTACAGAAGGCCGCGGACGAGAAGGGCGGCCCGTC
AGCCGTGCGGTTCAAGGTGATCTATGTCCTGTCATCGGCGAAGGGGACTG
GCGCGCATCCCGATGAGCCGGAGGGTATGGAGACTGTGCGCGCTCTCCGG
GCGAAGGGTGTTCCTGTCGCTACGATCCCGGAGTCGGCTGTTGCCTACTC
GATGGGCAAGGCCGATACTGTCATCGTTGGTGCCGAGGGTGTGGTTGAAA
ACGGTGGTATCGTGTCGCGCATGGGAACCTACCAGATCGGTCTTCTTGCG
AAGGCTATGGGCAAACCCTTTTACGTTGTGGCGGAGAGCCACAAGTTCGT
CCGTATCTACCCGCTCAGCCAGTATGATTTGCCTATTGAGCAGCGCGTGA
TCGATTTCAAGACTGAAGAAGATGTCGCCGACGAGGCGAAGCAACAGCAA
GCTTTGTCTACGGATACAGTCGATGCCAAGGCCGTCAACACGGCGGACAG
CGCTGATGTAGTTGACTTCACTCCCCCCATCTGAATGGCAGCTCCCACAT
CAGGCTCATCGGCCGCCGCCAAGCCGTTCGACATTGTCGCGACATACAAT
GACTTGCTCCGCTCCGATCCAGACCTCACTATGCCAATTGCAGCTATCGA
AGCTCTGGTACTACTCCTTACAAACTCTCCCTCCTCGACGATATCCGAGA
CGCTCGACCTTCTCGAGAAATCCACTGCACACCTGAAACAGTCGATCCCG
AACCCCATTGGTCTCTCTGCTGGAACCGACCTCTTCCAGCGATACCTGAT
TACTACCCTGCAGAGACCCGGACAGCTCGGGCCCGCAGGTGATTTCAACG
CGATCAGGGCGCATCTTCTGTCGAACGGACGGTTGTTTATCAGACGTGCG
AAAGAGAGTCGGGACAAGATCGCGGCGTTTGGACGAGGCTTTGTACGCGA
TGGAAGCACGGTTCTGACGAATGGAGGATCACGAGTTGTCGCTTCGTTGC
TACAGAAGGCCGCGGACGAGAAGGGCGGCCCGTCAGCCGTGCGGTTCAAG
GTGATCTATGTCCTGTCATCGGCGAAGGGGACTGGCGCGCATCCCGATGA
GCCGGAGGGTATGGAGACTGTGCGCGCTCTCCGGGCGAAGGGTGTTCCTG
TCGCTACGATCCCGGAGTCGGCTGTTGCCTACTCGATGGGCAAGGCCGAT
ACTGTCATCGTTGGTGCCGAGGGTGTGGTTGAAAACGGTGGTATCGTGTC
GCGCATGGGAACCTACCAGATCGGTCTTCTTGCGAAGGCTATGGGCAAAC
CCTTTTACGTTGTGGCGGAGAGCCACAAGTTCGTCCGTATCTACCCGCTC
AGCCAGTATGATTTGCCTATTGAGCAGCGCGTGATCGATTTCAAGACTGA
AGAAGATGTCGCCGACGAGGCGAAGCAACAGCAAGCTTTGTCTACGGATA
CAGTCGATGCCAAGGCCGTCAACACGGCGGACAGCGCTGATGTAGTTGAC
TTCACTCCCCCCATCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_44050CAN33_44050Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44050-T1.exon1CAN33_44050-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44050-T1.exon2CAN33_44050-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44050-T1.cdsCAN33_44050-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44050-T1CAN33_44050-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262X8R
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR042528
DBxrefInterPro:IPR042529
DBxrefInterPro:IPR000649
DBxrefPFAM:PF01008
ProductInitiation factor 2 subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1122326..1123375 +
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