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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1212722..1214277+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44215-T1 ID=CAN33_44215-T1|Name=CAN33_44215-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1556bp|location=Sequence derived from alignment at NKJJ01000022.1:1212722..1214277+ (Aspergillus niger FDAARGOS_311)
ATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGC
GCCCGCACAAGAGAGCGATGTCGAATCTTCCACCCCAGAGCAAACGCAAG
AACCAGAAGCACAAGAGCAAGAACAAGAAGAGGGACAGTCCAAGACATTC
AAGGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAGACCATGGG
CTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCTGGCTCTTC
AAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAAAGACGGCA
GCGTTTGCTCTTCCCATCCTCCAAGGTACGTTTCCAGCTACAACAATCTT
GTATCGCCTTTTATCGGCGCTCCCAAATATGACTAGATCAAATAACTAAC
ATCACCCCACAGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTC
CTCGCCCCAACCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTC
CCTAGGCGCCAGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGG
ACATGGTCTCTCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTG
GCCACCCCTGGTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTC
CCTCCGCAACCTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTG
ACATGGACTTCGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGT
GAGCGCCGCACATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATC
CCTCCAACGTGCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAA
GCAAATACCAGACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCC
CAGAAGCACAAGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGG
CCAGAGTACTATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTG
CGTTCTTGCTTCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAG
CTTTCACAGTCTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAG
TCGGAATATTCTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTC
CGTCCGTTGATGTTGTGCTTAACTTTGATTTGCCGGGTGGTATGTATACC
CGGTCTTCTGCTATGGGAGTATTATTGGAGTCGGCTAATGTTTTTATGTA
TTAGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTGCTGG
AAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTT
GGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGACTGC
CCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACG
GCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGCAGGG
GCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGAGGAG
GGTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1212722..1214277+ >CAN33_44215-T1 ID=CAN33_44215-T1|Name=CAN33_44215-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5280bp|location=Sequence derived from alignment at NKJJ01000022.1:1212722..1214277+ (Aspergillus niger FDAARGOS_311)
ATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGC
GCCCGCACAAGAGAGCGATGAACTAGGAATCATCGAACAGCTATGCGAGG
CTTGCGAGACCATGGGCTACAAAGCACCTACACCTATTCAGCGGGAGTCG
ATTCCTCTGGCTCTTCAAGGCCGTGATTTGATCGGTCTTGCAGAGACCGG
AAGTGGAAAGACGGCAGCGTTTGCTCTTCCCATCCTCCAAGCCTTGATGG
AAAAGCCCCAACCCTTCTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTC
GCCTACCAGATCTCCAAATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGT
GCGAAGCTGCGTCATCGTCGGTGGCATGGACATGGTCTCTCAGTCAATTT
CCCTCGGCAAAAAGCCCCATATCATCGTGGCCACCCCTGGTCGTCTTCTG
GACCACCTCGAGAACACCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCT
GGTGATGGACGAAGCGGATCGACTTCTTGACATGGACTTCGGACCCCTCC
TCGACAAGATCCTGAAAGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTC
TCTGCGACGATGAGCTCAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTC
CAATCCGCTCCGTGTCTCTGTCTCCACAAGCAAATACCAGACCGTCTCGA
CTCTCCTCCAATCTTACCTCTTCATTCCCCAGAAGCACAAGGACCTGTAC
CTTGTCTACCTGTTGAACGAATTCGCCGGCCAGAGTACTATCATCTTCAC
GAGGACGGTGAACGAGACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTG
GCTTCGGCGCTATCCCGCTGCATGGACAGCTTTCACAGTCTGCTCGTCTC
GGTGCGCTGGGCAAGTTCCGTGCTCGTAGTCGGAATATTCTTGTCGCGAC
GGATGTGGCTGCTCGTGGTTTGGATATTCCGTCCGTTGATGTTGTGCTTA
ACTTTGATTTGCCGGGTGATTCTCCCAGCTATGTCCACCGTGTCGGACGT
ACTGCCCGTGCTGGAAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTA
CGATGTTGAGGTTTGGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCA
AGGAATACGACTGCCCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTC
GCGGAGGCGCAACGGCAGGCGATTATGGATATGAAGGATTACAATGAGAA
GAAGGGAAGCAGGGGCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGA
TGGATCAAGAGGAGGGTTAGATGCCTGGAGTCAAGAAGCGCAAGGTCGCC
CGTGAGGCACCTGCGCCTGCGCCCGCACAAGAGAGCGATGAACTAGGAAT
CATCGAACAGCTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCTA
CACCTATTCAGCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTTG
ATCGGTCTTGCAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTCC
CATCCTCCAAGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTCC
TCGCCCCAACCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTCC
CTAGGCGCCAGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGGA
CATGGTCTCTCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTGG
CCACCCCTGGTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTCC
CTCCGCAACCTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTGA
CATGGACTTCGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGTG
AGCGCCGCACATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATCC
CTCCAACGTGCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAAG
CAAATACCAGACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCCC
AGAAGCACAAGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGGC
CAGAGTACTATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTGC
GTTCTTGCTTCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAGC
TTTCACAGTCTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAGT
CGGAATATTCTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTCC
GTCCGTTGATGTTGTGCTTAACTTTGATTTGCCGGGTGATTCTCCCAGCT
ATGTCCACCGTGTCGGACGTACTGCCCGTGCTGGAAAGAGTGGTCTTGCT
ATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTTGGCTGAGGATCGAAGG
TGCTTTGGGCAAGAAGCTCAAGGAATACGACTGCCCTAAGGATGAGGTCA
TGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACGGCAGGCGATTATGGAT
ATGAAGGATTACAATGAGAAGAAGGGAAGCAGGGGCAAGAAGTTCGGTGG
GAAGCGTTCCCGGGATGAGATGGATCAAGAGGAGGGTTAGATGCCTGGAG
TCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGCGCCCGCACAA
GAGAGCGATGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAGAC
CATGGGCTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCTGG
CTCTTCAAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAAAG
ACGGCAGCGTTTGCTCTTCCCATCCTCCAAGCCTTGATGGAAAAGCCCCA
ACCCTTCTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTCGCCTACCAGA
TCTCCAAATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGTGCGAAGCTGC
GTCATCGTCGGTGGCATGGACATGGTCTCTCAGTCAATTTCCCTCGGCAA
AAAGCCCCATATCATCGTGGCCACCCCTGGTCGTCTTCTGGACCACCTCG
AGAACACCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCTGGTGATGGAC
GAAGCGGATCGACTTCTTGACATGGACTTCGGACCCCTCCTCGACAAGAT
CCTGAAAGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTCTCTGCGACGA
TGAGCTCAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTCCAATCCGCTC
CGTGTCTCTGTCTCCACAAGCAAATACCAGACCGTCTCGACTCTCCTCCA
ATCTTACCTCTTCATTCCCCAGAAGCACAAGGACCTGTACCTTGTCTACC
TGTTGAACGAATTCGCCGGCCAGAGTACTATCATCTTCACGAGGACGGTG
AACGAGACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTGGCTTCGGCGC
TATCCCGCTGCATGGACAGCTTTCACAGTCTGCTCGTCTCGGTGCGCTGG
GCAAGTTCCGTGCTCGTAGTCGGAATATTCTTGTCGCGACGGATGTGGCT
GCTCGTGGTTTGGATATTCCGTCCGTTGATGTTGTGCTTAACTTTGATTT
GCCGGGTGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTG
CTGGAAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAG
GTTTGGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGA
CTGCCCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGC
AACGGCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGC
AGGGGCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGA
GGAGGGTTAGATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCAC
CTGCGCCTGCGCCCGCACAAGAGAGCGATGAACTAGGAATCATCGAACAG
CTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCTACACCTATTCA
GCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTTGATCGGTCTTG
CAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTCCCATCCTCCAA
GCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTCCTCGCCCCAAC
CCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTCCCTAGGCGCCA
GCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGGACATGGTCTCT
CAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTGGCCACCCCTGG
TCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTCCCTCCGCAACC
TGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTGACATGGACTTC
GGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGTGAGCGCCGCAC
ATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATCCCTCCAACGTG
CCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAAGCAAATACCAG
ACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCCCAGAAGCACAA
GGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGGCCAGAGTACTA
TCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTGCGTTCTTGCTT
CGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAGCTTTCACAGTC
TGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAGTCGGAATATTC
TTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTCCGTCCGTTGAT
GTTGTGCTTAACTTTGATTTGCCGGGTGATTCTCCCAGCTATGTCCACCG
TGTCGGACGTACTGCCCGTGCTGGAAAGAGTGGTCTTGCTATCAGCTTTG
TCGCCCAGTACGATGTTGAGGTTTGGCTGAGGATCGAAGGTGCTTTGGGC
AAGAAGCTCAAGGAATACGACTGCCCTAAGGATGAGGTCATGGTGCTTGG
TGAGAATGTCGCGGAGGCGCAACGGCAGGCGATTATGGATATGAAGGATT
ACAATGAGAAGAAGGGAAGCAGGGGCAAGAAGTTCGGTGGGAAGCGTTCC
CGGGATGAGATGGATCAAGAGGAGGGTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | ribosomal RNA processing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1212722..1214277 + |
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