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CAN33_44215-T1, CAN33_44215-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44215-T1
Unique NameCAN33_44215-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1212722..1214277+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44215-T1 ID=CAN33_44215-T1|Name=CAN33_44215-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1556bp|location=Sequence derived from alignment at NKJJ01000022.1:1212722..1214277+ (Aspergillus niger FDAARGOS_311)
ATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGC
GCCCGCACAAGAGAGCGATGTCGAATCTTCCACCCCAGAGCAAACGCAAG
AACCAGAAGCACAAGAGCAAGAACAAGAAGAGGGACAGTCCAAGACATTC
AAGGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAGACCATGGG
CTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCTGGCTCTTC
AAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAAAGACGGCA
GCGTTTGCTCTTCCCATCCTCCAAGGTACGTTTCCAGCTACAACAATCTT
GTATCGCCTTTTATCGGCGCTCCCAAATATGACTAGATCAAATAACTAAC
ATCACCCCACAGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTC
CTCGCCCCAACCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTC
CCTAGGCGCCAGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGG
ACATGGTCTCTCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTG
GCCACCCCTGGTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTC
CCTCCGCAACCTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTG
ACATGGACTTCGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGT
GAGCGCCGCACATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATC
CCTCCAACGTGCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAA
GCAAATACCAGACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCC
CAGAAGCACAAGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGG
CCAGAGTACTATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTG
CGTTCTTGCTTCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAG
CTTTCACAGTCTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAG
TCGGAATATTCTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTC
CGTCCGTTGATGTTGTGCTTAACTTTGATTTGCCGGGTGGTATGTATACC
CGGTCTTCTGCTATGGGAGTATTATTGGAGTCGGCTAATGTTTTTATGTA
TTAGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTGCTGG
AAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTT
GGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGACTGC
CCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACG
GCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGCAGGG
GCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGAGGAG
GGTTAG
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1212722..1214277+

>CAN33_44215-T1 ID=CAN33_44215-T1|Name=CAN33_44215-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5280bp|location=Sequence derived from alignment at NKJJ01000022.1:1212722..1214277+ (Aspergillus niger FDAARGOS_311)
ATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGC
GCCCGCACAAGAGAGCGATGAACTAGGAATCATCGAACAGCTATGCGAGG
CTTGCGAGACCATGGGCTACAAAGCACCTACACCTATTCAGCGGGAGTCG
ATTCCTCTGGCTCTTCAAGGCCGTGATTTGATCGGTCTTGCAGAGACCGG
AAGTGGAAAGACGGCAGCGTTTGCTCTTCCCATCCTCCAAGCCTTGATGG
AAAAGCCCCAACCCTTCTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTC
GCCTACCAGATCTCCAAATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGT
GCGAAGCTGCGTCATCGTCGGTGGCATGGACATGGTCTCTCAGTCAATTT
CCCTCGGCAAAAAGCCCCATATCATCGTGGCCACCCCTGGTCGTCTTCTG
GACCACCTCGAGAACACCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCT
GGTGATGGACGAAGCGGATCGACTTCTTGACATGGACTTCGGACCCCTCC
TCGACAAGATCCTGAAAGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTC
TCTGCGACGATGAGCTCAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTC
CAATCCGCTCCGTGTCTCTGTCTCCACAAGCAAATACCAGACCGTCTCGA
CTCTCCTCCAATCTTACCTCTTCATTCCCCAGAAGCACAAGGACCTGTAC
CTTGTCTACCTGTTGAACGAATTCGCCGGCCAGAGTACTATCATCTTCAC
GAGGACGGTGAACGAGACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTG
GCTTCGGCGCTATCCCGCTGCATGGACAGCTTTCACAGTCTGCTCGTCTC
GGTGCGCTGGGCAAGTTCCGTGCTCGTAGTCGGAATATTCTTGTCGCGAC
GGATGTGGCTGCTCGTGGTTTGGATATTCCGTCCGTTGATGTTGTGCTTA
ACTTTGATTTGCCGGGTGATTCTCCCAGCTATGTCCACCGTGTCGGACGT
ACTGCCCGTGCTGGAAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTA
CGATGTTGAGGTTTGGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCA
AGGAATACGACTGCCCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTC
GCGGAGGCGCAACGGCAGGCGATTATGGATATGAAGGATTACAATGAGAA
GAAGGGAAGCAGGGGCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGA
TGGATCAAGAGGAGGGTTAGATGCCTGGAGTCAAGAAGCGCAAGGTCGCC
CGTGAGGCACCTGCGCCTGCGCCCGCACAAGAGAGCGATGAACTAGGAAT
CATCGAACAGCTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCTA
CACCTATTCAGCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTTG
ATCGGTCTTGCAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTCC
CATCCTCCAAGCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTCC
TCGCCCCAACCCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTCC
CTAGGCGCCAGCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGGA
CATGGTCTCTCAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTGG
CCACCCCTGGTCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTCC
CTCCGCAACCTGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTGA
CATGGACTTCGGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGTG
AGCGCCGCACATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATCC
CTCCAACGTGCCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAAG
CAAATACCAGACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCCC
AGAAGCACAAGGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGGC
CAGAGTACTATCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTGC
GTTCTTGCTTCGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAGC
TTTCACAGTCTGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAGT
CGGAATATTCTTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTCC
GTCCGTTGATGTTGTGCTTAACTTTGATTTGCCGGGTGATTCTCCCAGCT
ATGTCCACCGTGTCGGACGTACTGCCCGTGCTGGAAAGAGTGGTCTTGCT
ATCAGCTTTGTCGCCCAGTACGATGTTGAGGTTTGGCTGAGGATCGAAGG
TGCTTTGGGCAAGAAGCTCAAGGAATACGACTGCCCTAAGGATGAGGTCA
TGGTGCTTGGTGAGAATGTCGCGGAGGCGCAACGGCAGGCGATTATGGAT
ATGAAGGATTACAATGAGAAGAAGGGAAGCAGGGGCAAGAAGTTCGGTGG
GAAGCGTTCCCGGGATGAGATGGATCAAGAGGAGGGTTAGATGCCTGGAG
TCAAGAAGCGCAAGGTCGCCCGTGAGGCACCTGCGCCTGCGCCCGCACAA
GAGAGCGATGAACTAGGAATCATCGAACAGCTATGCGAGGCTTGCGAGAC
CATGGGCTACAAAGCACCTACACCTATTCAGCGGGAGTCGATTCCTCTGG
CTCTTCAAGGCCGTGATTTGATCGGTCTTGCAGAGACCGGAAGTGGAAAG
ACGGCAGCGTTTGCTCTTCCCATCCTCCAAGCCTTGATGGAAAAGCCCCA
ACCCTTCTTCGGCCTCGTCCTCGCCCCAACCCGAGAACTCGCCTACCAGA
TCTCCAAATCTTTCGAGTCCCTAGGCGCCAGCATGGGTGTGCGAAGCTGC
GTCATCGTCGGTGGCATGGACATGGTCTCTCAGTCAATTTCCCTCGGCAA
AAAGCCCCATATCATCGTGGCCACCCCTGGTCGTCTTCTGGACCACCTCG
AGAACACCAAGGGCTTCTCCCTCCGCAACCTGAAGTACCTGGTGATGGAC
GAAGCGGATCGACTTCTTGACATGGACTTCGGACCCCTCCTCGACAAGAT
CCTGAAAGTCCTGCCCCGTGAGCGCCGCACATTCCTCTTCTCTGCGACGA
TGAGCTCAAAGGTCGAATCCCTCCAACGTGCCTCCCTCTCCAATCCGCTC
CGTGTCTCTGTCTCCACAAGCAAATACCAGACCGTCTCGACTCTCCTCCA
ATCTTACCTCTTCATTCCCCAGAAGCACAAGGACCTGTACCTTGTCTACC
TGTTGAACGAATTCGCCGGCCAGAGTACTATCATCTTCACGAGGACGGTG
AACGAGACGCAGAGACTTGCGTTCTTGCTTCGTGCGCTTGGCTTCGGCGC
TATCCCGCTGCATGGACAGCTTTCACAGTCTGCTCGTCTCGGTGCGCTGG
GCAAGTTCCGTGCTCGTAGTCGGAATATTCTTGTCGCGACGGATGTGGCT
GCTCGTGGTTTGGATATTCCGTCCGTTGATGTTGTGCTTAACTTTGATTT
GCCGGGTGATTCTCCCAGCTATGTCCACCGTGTCGGACGTACTGCCCGTG
CTGGAAAGAGTGGTCTTGCTATCAGCTTTGTCGCCCAGTACGATGTTGAG
GTTTGGCTGAGGATCGAAGGTGCTTTGGGCAAGAAGCTCAAGGAATACGA
CTGCCCTAAGGATGAGGTCATGGTGCTTGGTGAGAATGTCGCGGAGGCGC
AACGGCAGGCGATTATGGATATGAAGGATTACAATGAGAAGAAGGGAAGC
AGGGGCAAGAAGTTCGGTGGGAAGCGTTCCCGGGATGAGATGGATCAAGA
GGAGGGTTAGATGCCTGGAGTCAAGAAGCGCAAGGTCGCCCGTGAGGCAC
CTGCGCCTGCGCCCGCACAAGAGAGCGATGAACTAGGAATCATCGAACAG
CTATGCGAGGCTTGCGAGACCATGGGCTACAAAGCACCTACACCTATTCA
GCGGGAGTCGATTCCTCTGGCTCTTCAAGGCCGTGATTTGATCGGTCTTG
CAGAGACCGGAAGTGGAAAGACGGCAGCGTTTGCTCTTCCCATCCTCCAA
GCCTTGATGGAAAAGCCCCAACCCTTCTTCGGCCTCGTCCTCGCCCCAAC
CCGAGAACTCGCCTACCAGATCTCCAAATCTTTCGAGTCCCTAGGCGCCA
GCATGGGTGTGCGAAGCTGCGTCATCGTCGGTGGCATGGACATGGTCTCT
CAGTCAATTTCCCTCGGCAAAAAGCCCCATATCATCGTGGCCACCCCTGG
TCGTCTTCTGGACCACCTCGAGAACACCAAGGGCTTCTCCCTCCGCAACC
TGAAGTACCTGGTGATGGACGAAGCGGATCGACTTCTTGACATGGACTTC
GGACCCCTCCTCGACAAGATCCTGAAAGTCCTGCCCCGTGAGCGCCGCAC
ATTCCTCTTCTCTGCGACGATGAGCTCAAAGGTCGAATCCCTCCAACGTG
CCTCCCTCTCCAATCCGCTCCGTGTCTCTGTCTCCACAAGCAAATACCAG
ACCGTCTCGACTCTCCTCCAATCTTACCTCTTCATTCCCCAGAAGCACAA
GGACCTGTACCTTGTCTACCTGTTGAACGAATTCGCCGGCCAGAGTACTA
TCATCTTCACGAGGACGGTGAACGAGACGCAGAGACTTGCGTTCTTGCTT
CGTGCGCTTGGCTTCGGCGCTATCCCGCTGCATGGACAGCTTTCACAGTC
TGCTCGTCTCGGTGCGCTGGGCAAGTTCCGTGCTCGTAGTCGGAATATTC
TTGTCGCGACGGATGTGGCTGCTCGTGGTTTGGATATTCCGTCCGTTGAT
GTTGTGCTTAACTTTGATTTGCCGGGTGATTCTCCCAGCTATGTCCACCG
TGTCGGACGTACTGCCCGTGCTGGAAAGAGTGGTCTTGCTATCAGCTTTG
TCGCCCAGTACGATGTTGAGGTTTGGCTGAGGATCGAAGGTGCTTTGGGC
AAGAAGCTCAAGGAATACGACTGCCCTAAGGATGAGGTCATGGTGCTTGG
TGAGAATGTCGCGGAGGCGCAACGGCAGGCGATTATGGATATGAAGGATT
ACAATGAGAAGAAGGGAAGCAGGGGCAAGAAGTTCGGTGGGAAGCGTTCC
CGGGATGAGATGGATCAAGAGGAGGGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RRP3CAN33_44215Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44215-T1.exon1CAN33_44215-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44215-T1.exon2CAN33_44215-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44215-T1.exon3CAN33_44215-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_44215-T1.exon4CAN33_44215-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44215-T1.cdsCAN33_44215-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44215-T1CAN33_44215-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Productribosomal RNA processing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1212722..1214277 +
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