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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:439021..441113- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4425-T1 ID=CAN33_4425-T1|Name=CAN33_4425-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2093bp|location=Sequence derived from alignment at NKJJ01000019.1:439021..441113- (Aspergillus niger FDAARGOS_311)
ATGGCTGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCT
GCACAGACGATTCGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCTATG
TAGTGGCATTTGCTATTGGCGATAAGTCATCTTGTAAGTTTACACCAACA
CCGAGCGGCGTTTGACAAGCTGTGATCGCTAACCAGCTGTGATATCTCGA
TAGTCTTGTGGGCTTGGTTCCCCATTGGAGGATGTGGAGTTCGCACAGTT
CTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTTGGTCAGAT
GCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTTCAAATACC
TCGTTCCCCTCGACGTTATACAGACTTTTGGCTGGTACTTGTTCTCCGCC
TGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGCGCACACCT
GGAATTGGTGAACCGAGCTAGGTATGTTTCCTGCGACGACGAGCTCAAGC
GGTTCTCTTGAATTCGCCTAACTAGTTATGCTAGACCTCACGAACGAGCA
AGCTTAAACGAAAGAGCAATCTACCTTTATACCTACCACTTTCTCCTGGC
AGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGATCGCGTCCCTC
TTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGGCAG
GAGCAATCGATCTCTAAACGCCTCCAGTCAGCATTGCCGCAGCTCATCAA
AGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCAT
ACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTTGCA
AAGCTATTCTGGGATTTCCCGAGATCCGCTGCATCCCCTCCCGGCATTAT
CCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCC
TGGTTCTCTGCTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTCAGC
AAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGGCTGAAGCCAAGGATCC
CAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCG
CTTTTGCATTCTGGGAGCTGTACTTCATCAGCCAGAGATTTCCTGACCGC
CGGAAGGCCATCTTCAACGACATCGATCGCGAGGAGGGTGCAGTTTGGTC
GCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCA
TCAGCGAGGCTAAGAATCCATCATCTGGCCCTAAGCCTGCACCGGTCCAG
CAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGCTGACGGACCCCCCTAA
GGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAA
AGTTCGGCGAAGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCCCCT
GACTGGACGCCTACCGCACGCGCCAAAGCCCGCGATGTCTTGGACCGCGC
CTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCT
CCCAGGACCTCAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAGAAC
CTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTCCACTAGGCCGACTCTT
CCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCC
ACGCCAACCTCTGCTCCGTCATCGACGCCACCGAATCCCTCACCTGCCTT
CTCATCAAGAGTCTCGCGGAGGACCAATACGGAAAGGTCCAAGCCGACGT
AGCCACCGTCGTACGCCTACTGACCGATACCATCACGACCTCGAACCTTT
TATTAACGGCGGCCTCGATGCTCACTGGACAGACGTCAACTTCCCCCATC
CAGCAACCCGGAGGCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGACC
TCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCATTC
GGCCCTTACTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGACTGGC
CAAGGAAGCAGCCGGTGTCGTGGAAGAGGATCCCTTTAACTAA back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:439021..441113- >CAN33_4425-T1 ID=CAN33_4425-T1|Name=CAN33_4425-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7428bp|location=Sequence derived from alignment at NKJJ01000019.1:439021..441113- (Aspergillus niger FDAARGOS_311)
GCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGACCTCGTCCTGGACAC
AATGAAGGCATCCCTCAAGGACCTTCTGTCTTCATTCGGCCCTTACTTCA
AGAACCTCGGCCTTGGAGCCAAGGACTTAAGACTGGCCAAGGAAGCAGCC
GGTGTCGTGGAAGAGGATCCCTTTAACTAAACCTCACGAACGAGCAAGCT
TAAACGAAAGAGCAATCTACCTTTATACCTACCACTTTCTCCTGGCAGTC
GCGCAGTCAGTGGTTCATCTTTACTACGACTACGATCGCGTCCCTCTTCC
CGTTGCCAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGGCAGGAGC
AATCGATCTCTAAACGCCTCCAGTCAGCATTGCCGCAGCTCATCAAAGAT
GGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCGCATACGC
CTTCGTCCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTTGCAAAGC
TATTCTGGGATTTCCCGAGATCCGCTGCATCCCCTCCCGGCATTATCCCG
CCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCCTCCTGGT
TCTCTGCTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTCAGCAAAG
AGCCGCTCAAGCGAGGCCAGCCCTTGACGGCTGAAGCCAAGGATCCCAAC
GGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTCGCGCTTT
TGCATTCTGGGAGCTGTACTTCATCAGCCAGAGATTTCCTGACCGCCGGA
AGGCCATCTTCAACGACATCGATCGCGAGGAGGGTGCAGTTTGGTCGCAA
ATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTTACCACTCGCATCAG
CGAGGCTAAGAATCCATCATCTGGCCCTAAGCCTGCACCGGTCCAGCAGT
CCGAGCCCGTCCTTCACTCCCTGCCACGGCTGACGGACCCCCCTAAGGCG
GACAACATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAACAAAAGTT
CGGCGAAGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCCCCTGACT
GGACGCCTACCGCACGCGCCAAAGCCCGCGATGTCTTGGACCGCGCCTCC
TCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTTCCTCCCA
GGACCTCAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAGAACCTGC
ACCCCTTCCTCGCTCAGCTCCTCCGCTCTCCACTAGGCCGACTCTTCCGC
CAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACACCCCACGC
CAACCTCTGCTCCGTCATCGACGCCACCGAATCCCTCACCTGCCTTCTCA
TCAAGAGTCTCGCGGAGGACCAATACGGAAAGGTCCAAGCCGACGTAGCC
ACCGTCTCTTGTGGGCTTGGTTCCCCATTGGAGGATGTGGAGTTCGCACA
GTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTGTTGGTCA
GATGCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACCTTCAAAT
ACCTCGTTCCCCTCGACGTTATACAGACTTTTGGCTGGTACTTGTTCTCC
GCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTAGCGCACA
CCTGGAATTGGTGAACCGAGCTAGATGGCTGCAGCACAGCCTCGCCCGTA
TCGGCGCATCTTGACCTCTGCGCTGCACAGACGATTCGTTCATGCGTCGG
CACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTGCTATTGGCGATAAG
TCATCTTGCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGACCTCGTCC
TGGACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCATTCGGCCCT
TACTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGACTGGCCAAGGA
AGCAGCCGGTGTCGTGGAAGAGGATCCCTTTAACTAAACCTCACGAACGA
GCAAGCTTAAACGAAAGAGCAATCTACCTTTATACCTACCACTTTCTCCT
GGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGATCGCGTCC
CTCTTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTGATGAAGATAGCCGG
CAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCATTGCCGCAGCTCAT
CAAAGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGCCCATTCG
CATACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCACTACACTGTACTTT
GCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCATCCCCTCCCGGCAT
TATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCAGGAGGCC
TCCTGGTTCTCTGCTGGCAGACAGCTAACCTCTTTTTCTCCGTGTTCCTC
AGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGGCTGAAGCCAAGGA
TCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAAACCGTTC
GCGCTTTTGCATTCTGGGAGCTGTACTTCATCAGCCAGAGATTTCCTGAC
CGCCGGAAGGCCATCTTCAACGACATCGATCGCGAGGAGGGTGCAGTTTG
GTCGCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTTACCACTC
GCATCAGCGAGGCTAAGAATCCATCATCTGGCCCTAAGCCTGCACCGGTC
CAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGCTGACGGACCCCCC
TAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACTCGCCAAC
AAAAGTTCGGCGAAGCCCTCACCACCACCGCCAGAGCCTACGGCAACTCC
CCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGCGATGTCTTGGACCG
CGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTGCTCGGTT
CCTCCCAGGACCTCAAGATGCTCACCGCGCCATCAACTAGCAAGCCCGAG
AACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTCCACTAGGCCGACT
CTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTCGGCACAC
CCCACGCCAACCTCTGCTCCGTCATCGACGCCACCGAATCCCTCACCTGC
CTTCTCATCAAGAGTCTCGCGGAGGACCAATACGGAAAGGTCCAAGCCGA
CGTAGCCACCGTCTCTTGTGGGCTTGGTTCCCCATTGGAGGATGTGGAGT
TCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTCCTCCGTG
TTGGTCAGATGCACATCGGTGCCAGGACAACCTCCTCCCCGCTTAGCACC
TTCAAATACCTCGTTCCCCTCGACGTTATACAGACTTTTGGCTGGTACTT
GTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCTTCAAGTA
GCGCACACCTGGAATTGGTGAACCGAGCTAGATGGCTGCAGCACAGCCTC
GCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACGATTCGTTCAT
GCGTCGGCACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTGCTATTGG
CGATAAGTCATCTTGCACAAGCTGCGGCTCGCCGTGTCCCTGATGTCGAC
CTCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTTCTGTCTTCATT
CGGCCCTTACTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTAAGACTGG
CCAAGGAAGCAGCCGGTGTCGTGGAAGAGGATCCCTTTAACTAAACCTCA
CGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACCTACCACT
TTCTCCTGGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGACTACGAT
CGCGTCCCTCTTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTGATGAAGA
TAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCATTGCCGC
AGCTCATCAAAGATGGGATGAAACGGAGTATCTTGGTTTCCATTCTTTGC
CCATTCGCATACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCACTACACT
GTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCATCCCCTC
CCGGCATTATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTTGATTTCA
GGAGGCCTCCTGGTTCTCTGCTGGCAGACAGCTAACCTCTTTTTCTCCGT
GTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACGGCTGAAG
CCAAGGATCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAAGAAGGAA
ACCGTTCGCGCTTTTGCATTCTGGGAGCTGTACTTCATCAGCCAGAGATT
TCCTGACCGCCGGAAGGCCATCTTCAACGACATCGATCGCGAGGAGGGTG
CAGTTTGGTCGCAAATCCTGCAAGCCGCCACAGATGTCATCACGGGCGTT
ACCACTCGCATCAGCGAGGCTAAGAATCCATCATCTGGCCCTAAGCCTGC
ACCGGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGGCTGACGG
ACCCCCCTAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGCAACAACT
CGCCAACAAAAGTTCGGCGAAGCCCTCACCACCACCGCCAGAGCCTACGG
CAACTCCCCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGCGATGTCT
TGGACCGCGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCAGAAGCTG
CTCGGTTCCTCCCAGGACCTCAAGATGCTCACCGCGCCATCAACTAGCAA
GCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCTCCACTAG
GCCGACTCTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCATTGTCCTC
GGCACACCCCACGCCAACCTCTGCTCCGTCATCGACGCCACCGAATCCCT
CACCTGCCTTCTCATCAAGAGTCTCGCGGAGGACCAATACGGAAAGGTCC
AAGCCGACGTAGCCACCGTCTCTTGTGGGCTTGGTTCCCCATTGGAGGAT
GTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGTCTTCGTC
CTCCGTGTTGGTCAGATGCACATCGGTGCCAGGACAACCTCCTCCCCGCT
TAGCACCTTCAAATACCTCGTTCCCCTCGACGTTATACAGACTTTTGGCT
GGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTGGTCTTCT
TCAAGTAGCGCACACCTGGAATTGGTGAACCGAGCTAGATGGCTGCAGCA
CAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACAGACGATT
CGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCTATGTAGTGGCATTTG
CTATTGGCGATAAGTCATCTTGCACAAGCTGCGGCTCGCCGTGTCCCTGA
TGTCGACCTCGTCCTGGACACAATGAAGGCATCCCTCAAGGACCTTCTGT
CTTCATTCGGCCCTTACTTCAAGAACCTCGGCCTTGGAGCCAAGGACTTA
AGACTGGCCAAGGAAGCAGCCGGTGTCGTGGAAGAGGATCCCTTTAACTA
AACCTCACGAACGAGCAAGCTTAAACGAAAGAGCAATCTACCTTTATACC
TACCACTTTCTCCTGGCAGTCGCGCAGTCAGTGGTTCATCTTTACTACGA
CTACGATCGCGTCCCTCTTCCCGTTGCCAGGAGGGTCGCTGGCTCCGCTG
ATGAAGATAGCCGGCAGGAGCAATCGATCTCTAAACGCCTCCAGTCAGCA
TTGCCGCAGCTCATCAAAGATGGGATGAAACGGAGTATCTTGGTTTCCAT
TCTTTGCCCATTCGCATACGCCTTCGTCCTCCGGCGCCCGGCATGGAGCA
CTACACTGTACTTTGCAAAGCTATTCTGGGATTTCCCGAGATCCGCTGCA
TCCCCTCCCGGCATTATCCCGCCAATCCTCGGAGTTATCGTGCGAACCTT
GATTTCAGGAGGCCTCCTGGTTCTCTGCTGGCAGACAGCTAACCTCTTTT
TCTCCGTGTTCCTCAGCAAAGAGCCGCTCAAGCGAGGCCAGCCCTTGACG
GCTGAAGCCAAGGATCCCAACGGCAGCTTGCTGAATGGACTAAAAGCAAA
GAAGGAAACCGTTCGCGCTTTTGCATTCTGGGAGCTGTACTTCATCAGCC
AGAGATTTCCTGACCGCCGGAAGGCCATCTTCAACGACATCGATCGCGAG
GAGGGTGCAGTTTGGTCGCAAATCCTGCAAGCCGCCACAGATGTCATCAC
GGGCGTTACCACTCGCATCAGCGAGGCTAAGAATCCATCATCTGGCCCTA
AGCCTGCACCGGTCCAGCAGTCCGAGCCCGTCCTTCACTCCCTGCCACGG
CTGACGGACCCCCCTAAGGCGGACAACATCTTCGCTCCGTCCCCCAAGGC
AACAACTCGCCAACAAAAGTTCGGCGAAGCCCTCACCACCACCGCCAGAG
CCTACGGCAACTCCCCTGACTGGACGCCTACCGCACGCGCCAAAGCCCGC
GATGTCTTGGACCGCGCCTCCTCCGCCATGCTGAGCCCTGAACGCAAGCA
GAAGCTGCTCGGTTCCTCCCAGGACCTCAAGATGCTCACCGCGCCATCAA
CTAGCAAGCCCGAGAACCTGCACCCCTTCCTCGCTCAGCTCCTCCGCTCT
CCACTAGGCCGACTCTTCCGCCAAACCTACGCTCGTCGCCTCTCCGGCAT
TGTCCTCGGCACACCCCACGCCAACCTCTGCTCCGTCATCGACGCCACCG
AATCCCTCACCTGCCTTCTCATCAAGAGTCTCGCGGAGGACCAATACGGA
AAGGTCCAAGCCGACGTAGCCACCGTCTCTTGTGGGCTTGGTTCCCCATT
GGAGGATGTGGAGTTCGCACAGTTCTTCTCTTCCTCTGCAGTCTCGTTGT
CTTCGTCCTCCGTGTTGGTCAGATGCACATCGGTGCCAGGACAACCTCCT
CCCCGCTTAGCACCTTCAAATACCTCGTTCCCCTCGACGTTATACAGACT
TTTGGCTGGTACTTGTTCTCCGCCTGGTGGTTCACTGAAATCTACAGGTG
GTCTTCTTCAAGTAGCGCACACCTGGAATTGGTGAACCGAGCTAGATGGC
TGCAGCACAGCCTCGCCCGTATCGGCGCATCTTGACCTCTGCGCTGCACA
GACGATTCGTTCATGCGTCGGCACTGGCGCTTCTGGTCTGCTATGTAGTG
GCATTTGCTATTGGCGATAAGTCATCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019049 |
| DBxref | PFAM:PF09531 |
| Product | Nucleoporin protein Ndc1-Nup family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:439021..441113 - |
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