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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000022.1:1275405..1276110- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_44295-T1 ID=CAN33_44295-T1|Name=CAN33_44295-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=706bp|location=Sequence derived from alignment at NKJJ01000022.1:1275405..1276110- (Aspergillus niger FDAARGOS_311)
ATGCCTCTCATCAACGAATCCCACGATTCACTTCCTTGTAAGCTGCCTTA
CCTCTGCTATGAATTTCCCTTCTAACGCGTGGACCTTCTTAGACATCGAA
CCGGCCCCTTCCACCCAGGCACGAGCAGCTGCAGAAAAGCTAATTGCCGC
GGAGCTTTCTTTGGATGCCAAAACGACCATCCACCCGTCCATTCCTGCTT
TTCCTGAGTCACGGTTTTCTCCACTCATCCAGCAGGAGGTGGACCGCAAG
GCTGCCGGACTGCCCTTGACTGGCGGAATCGACCTCTCCCGCTATGAAGC
GCCTGAGGCGCCTGCTAAAGCCGCTGACGGAACCCCTGATCTGGAGGAAT
GGCGACGGACACTGCAGAAGGCTTACACGGCCAGCTCCCATTTATCGATG
CGGCACGAGAATCTGGCGCTGCTAGAAGAGAATGGAAAGAATGCTTGGCT
GATTGGCAATTCACAGCTTGAAGACATCCTACGGGGGCTTGAGAAGGAAT
TGGCCGAGATGAAGGAGGCTGCCGAATCTGTGAACAAGGAGAGAAAGCTC
GCCCAGGAAGCCAACAAGGGAGAGATTGTGGGGCTGGAGGAGACCTGGAA
GCGTGGTGTTGGTGCGATTCTCGACGTGGAATTGGCTGCAGAGGGCCTGC
GCATGCAGATCTTGGAGCAGAGGCGTCAACTGGCGCAGCAGCATGCGCAG
CAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000022.1:1275405..1276110- >CAN33_44295-T1 ID=CAN33_44295-T1|Name=CAN33_44295-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1302bp|location=Sequence derived from alignment at NKJJ01000022.1:1275405..1276110- (Aspergillus niger FDAARGOS_311)
ACATCGAACCGGCCCCTTCCACCCAGGCACGAGCAGCTGCAGAAAAGCTA
ATTGCCGCGGAGCTTTCTTTGGATGCCAAAACGACCATCCACCCGTCCAT
TCCTGCTTTTCCTGAGTCACGGTTTTCTCCACTCATCCAGCAGGAGGTGG
ACCGCAAGGCTGCCGGACTGCCCTTGACTGGCGGAATCGACCTCTCCCGC
TATGAAGCGCCTGAGGCGCCTGCTAAAGCCGCTGACGGAACCCCTGATCT
GGAGGAATGGCGACGGACACTGCAGAAGGCTTACACGGCCAGCTCCCATT
TATCGATGCGGCACGAGAATCTGGCGCTGCTAGAAGAGAATGGAAAGAAT
GCTTGGCTGATTGGCAATTCACAGCTTGAAGACATCCTACGGGGGCTTGA
GAAGGAATTGGCCGAGATGAAGGAGGCTGCCGAATCTGTGAACAAGGAGA
GAAAGCTCGCCCAGGAAGCCAACAAGGGAGAGATTGTGGGGCTGGAGGAG
ACCTGGAAGCGTGGTGTTGGTGCGATTCTCGACGTGGAATTGGCTGCAGA
GGGCCTGCGCATGCAGATCTTGGAGCAGAGGCGTCAACTGGCGCAGCAGC
ATGCGCAGCAGTAAATGCCTCTCATCAACGAATCCCACGATTCACTTCCT
TACATCGAACCGGCCCCTTCCACCCAGGCACGAGCAGCTGCAGAAAAGCT
AATTGCCGCGGAGCTTTCTTTGGATGCCAAAACGACCATCCACCCGTCCA
TTCCTGCTTTTCCTGAGTCACGGTTTTCTCCACTCATCCAGCAGGAGGTG
GACCGCAAGGCTGCCGGACTGCCCTTGACTGGCGGAATCGACCTCTCCCG
CTATGAAGCGCCTGAGGCGCCTGCTAAAGCCGCTGACGGAACCCCTGATC
TGGAGGAATGGCGACGGACACTGCAGAAGGCTTACACGGCCAGCTCCCAT
TTATCGATGCGGCACGAGAATCTGGCGCTGCTAGAAGAGAATGGAAAGAA
TGCTTGGCTGATTGGCAATTCACAGCTTGAAGACATCCTACGGGGGCTTG
AGAAGGAATTGGCCGAGATGAAGGAGGCTGCCGAATCTGTGAACAAGGAG
AGAAAGCTCGCCCAGGAAGCCAACAAGGGAGAGATTGTGGGGCTGGAGGA
GACCTGGAAGCGTGGTGTTGGTGCGATTCTCGACGTGGAATTGGCTGCAG
AGGGCCTGCGCATGCAGATCTTGGAGCAGAGGCGTCAACTGGCGCAGCAG
CATGCGCAGCAGTAAATGCCTCTCATCAACGAATCCCACGATTCACTTCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006397 | mRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008409 |
| DBxref | PFAM:PF05700 |
| Product | Breast carcinoma amplified sequence 2 (BCAS2) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000022.1 | supercontig | NKJJ01000022.1:1275405..1276110 - |
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