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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000019.1:441538..442430+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_4430-T1 ID=CAN33_4430-T1|Name=CAN33_4430-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=893bp|location=Sequence derived from alignment at NKJJ01000019.1:441538..442430+ (Aspergillus niger FDAARGOS_311)
ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCG
TCGCTCCGACGATCCCCAGTATCGCGATGACCCCGAATTCCATCGTTTGA
CCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG
TTATCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGT
GCGCGAGAGAGTCCACAAGCTCCTGGAGGATACTCGGGGGGTTTCAGGGA
TGTCGCAGAAGGGATTAAGAAGGTCCAGACATGGGAGGATGTCAGCGTAT
GTTACGCCCATATATAACCCCCCACTGCGCTGCGACCGAACAAGCAATAT
TAATGTATTTCTCACCAGCCTTCCCAAAAATGGACTCAGCAGAAGCTATC
GTCCGAATTTAAATCTACCCTAGAAGAGTTCCAGACTGTTCAGCGTCGTG
CCTTGGAGAAGCAACGGGCATCCGCAGCAGCAGCTCGGACTGCCGTAGAC
GAAGCGGAGCCTGGTTCCGGAGGTGACCATCAGCCGCAGCAACAGCAAGA
CCAATTGTTGGAGGAACAGCCCCGCCTTGCGAATCAGGACGAAGTGGACT
TCCAGGAGGCCCTCATTATCGAGCGCGAGGCTGAGATCCGCAACATTGAG
CAGAGCGTTGGCGAACTCAATGAACTGTTCCGGGACGTGGCTCACATTGT
CCATGAGCAAGGTGGACAGCTTGATATTATCAGCGAGAACGTTGAACGAG
TTGGCGATGACACTCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAGCCGG
TACCAGAAGAATGCGCGCAACAAGGCTTGCTGTCTGCTTGTCATTTTTGC
TGTTATCCTTACCATCATCGTCCTGGCGGCAACCCTGGGATAG back to topCoding sequence (CDS) from alignment at NKJJ01000019.1:441538..442430+ >CAN33_4430-T1 ID=CAN33_4430-T1|Name=CAN33_4430-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1530bp|location=Sequence derived from alignment at NKJJ01000019.1:441538..442430+ (Aspergillus niger FDAARGOS_311)
ATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACAGCCTACAACTTTCCG
TCGCTCCGACGATCCCCAGTATCGCGATGACCCCGAATTCCATCGTTTGA
CCGAGGGTCTCTCCAACCAACTGTTTACCCTGACCTCCAACATCACTCGG
TTATCCGATCAGATTGCCCTTCTGGGAACGAGGCGAGACACTGAGCGTGT
GCGCGAGAGAGTCCACAAGCTCCTGGAGGATACTCGGGGGCCTTCCCAAA
AATGGACTCAGCAGAAGCTATCGTCCGAATTTAAATCTACCCTAGAAGAG
TTCCAGACTGTTCAGCGTCGTGCCTTGGAGAAGCAACGGGCATCCGCAGC
AGCAGCTCGGACTGCCGTAGACGAAGCGGAGCCTGGTTCCGGAGGTGACC
ATCAGCCGCAGCAACAGCAAGACCAATTGTTGGAGGAACAGCCCCGCCTT
GCGAATCAGGACGAAGTGGACTTCCAGGAGGCCCTCATTATCGAGCGCGA
GGCTGAGATCCGCAACATTGAGCAGAGCGTTGGCGAACTCAATGAACTGT
TCCGGGACGTGGCTCACATTGTCCATGAGCAAGGTGGACAGCTTGATATT
ATCAGCGAGAACGTTGAACGAGTTGGCGATGACACTCGTGGAGCAAACGT
CGAGCTCCGTAGCGCCAGCCGGTACCAGAAGAATGCGCGCAACAAGGCTT
GCTGTCTGCTTGTCATTTTTGCTGTTATCCTTACCATCATCGTCCTGGCG
GCAACCCTGGGATAGATGTCGTTTGATCGCTTGAACTCGCTAGAGGCACA
GCCTACAACTTTCCGTCGCTCCGACGATCCCCAGTATCGCGATGACCCCG
AATTCCATCGTTTGACCGAGGGTCTCTCCAACCAACTGTTTACCCTGACC
TCCAACATCACTCGGTTATCCGATCAGATTGCCCTTCTGGGAACGAGGCG
AGACACTGAGCGTGTGCGCGAGAGAGTCCACAAGCTCCTGGAGGATACTC
GGGGGCCTTCCCAAAAATGGACTCAGCAGAAGCTATCGTCCGAATTTAAA
TCTACCCTAGAAGAGTTCCAGACTGTTCAGCGTCGTGCCTTGGAGAAGCA
ACGGGCATCCGCAGCAGCAGCTCGGACTGCCGTAGACGAAGCGGAGCCTG
GTTCCGGAGGTGACCATCAGCCGCAGCAACAGCAAGACCAATTGTTGGAG
GAACAGCCCCGCCTTGCGAATCAGGACGAAGTGGACTTCCAGGAGGCCCT
CATTATCGAGCGCGAGGCTGAGATCCGCAACATTGAGCAGAGCGTTGGCG
AACTCAATGAACTGTTCCGGGACGTGGCTCACATTGTCCATGAGCAAGGT
GGACAGCTTGATATTATCAGCGAGAACGTTGAACGAGTTGGCGATGACAC
TCGTGGAGCAAACGTCGAGCTCCGTAGCGCCAGCCGGTACCAGAAGAATG
CGCGCAACAAGGCTTGCTGTCTGCTTGTCATTTTTGCTGTTATCCTTACC
ATCATCGTCCTGGCGGCAACCCTGGGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005484 | SNAP receptor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
| GO:0006886 | intracellular protein transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR010989 |
| DBxref | InterPro:IPR006012 |
| DBxref | InterPro:IPR006011 |
| DBxref | InterPro:IPR000727 |
| DBxref | PFAM:PF05739 |
| Product | SNARE domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000019.1 | supercontig | NKJJ01000019.1:441538..442430 + |
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