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CAN33_44845-T1, CAN33_44845-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44845-T1
Unique NameCAN33_44845-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1602328..1603402+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44845-T1 ID=CAN33_44845-T1|Name=CAN33_44845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1075bp|location=Sequence derived from alignment at NKJJ01000022.1:1602328..1603402+ (Aspergillus niger FDAARGOS_311)
ATGCGAGTAAGAGGGGCACCCGCTATTGCCATTGTAGCGGCCCTCGCTCT
TGCATCCGAGCTTCATAGGCTCATGGCATGCAATAACATACCTTCGGAAG
CCCCAGAGGTTCAAGCCTTTATTGCGAAAAAGCTCGATTATCTCGTGAGC
AGCAGGCCCACAGCAGTGAATCTTGCCGATGCTGCTCGGAAACTCAGGGC
CGTGGCGAGTGATCATACACAAAGGCCTGGATCGACCGGGCGCAGCGTCG
CTACTGCTTTGATACAAGCAGCAGAGGAAATGCTGAAGAAGGATATCGAG
GACAATAAAAACATAGGAAAGCATGGTGCCCAATGGATCATGGCCAATGC
CGCGGGTAAGCCGAAGGCTACTGTTCTCACTCATTGCAATACGGGGTAAG
TACAGCGAAGCTCAACTGCAGGTTATCCGGTTCTAACCCGCTGTCAGCTC
CCTTGCAACATCAGGATACGGCACTGCGCTCGGGGTTATCCGCGCCCTTG
CGTCTGCAGACAATTTGAACCATGCTTACTGCACCGAGACACGACCCTAC
AATCAAGGATCTCGGTTGACTGCGTTCGAATTGGTCCACGACCGTCTCCC
CGCCACCCTCATAACAGACTCCATGGCCGCTGCTCTACTTGCGAAGTCTG
GTTCTAAGGTAGATGCCATCGTAGTGGGGGCGGATAGGGTGGCTGCTAAC
GGAGATACGGCGAATAAAATTGGTACTTATGGCCTCGCTGTGCTTGCAAG
GTATCACGGTGTAAAGTTCCTCGTCGCTGCACCGCTTACTACAATTGATC
TGGCCACCCCATCCGGGAATGAAATCATAATCGAGGAACGTGCGGCCTCC
GAGGTCACAAATGTCAGAGGGCCGCGTGCCAGCAATTCTACCAATGGGAT
TGAACTAGAAACTGTGCGCATAGCCGCCGATGGCATCGATGTCTGGAACC
CGGCCTTTGATGTCACACCGTCCACACTTATTGACGGTATCATTACAGAG
AGGGGCGTGGTCGAGAAGGACGCCAGTGGACAATTTCACTTGGAGGACTT
GTTTCGCAACTCATCTTCAACATGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1602328..1603402+

>CAN33_44845-T1 ID=CAN33_44845-T1|Name=CAN33_44845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2046bp|location=Sequence derived from alignment at NKJJ01000022.1:1602328..1603402+ (Aspergillus niger FDAARGOS_311)
ATGCGAGTAAGAGGGGCACCCGCTATTGCCATTGTAGCGGCCCTCGCTCT
TGCATCCGAGCTTCATAGGCTCATGGCATGCAATAACATACCTTCGGAAG
CCCCAGAGGTTCAAGCCTTTATTGCGAAAAAGCTCGATTATCTCGTGAGC
AGCAGGCCCACAGCAGTGAATCTTGCCGATGCTGCTCGGAAACTCAGGGC
CGTGGCGAGTGATCATACACAAAGGCCTGGATCGACCGGGCGCAGCGTCG
CTACTGCTTTGATACAAGCAGCAGAGGAAATGCTGAAGAAGGATATCGAG
GACAATAAAAACATAGGAAAGCATGGTGCCCAATGGATCATGGCCAATGC
CGCGGGTAAGCCGAAGGCTACTGTTCTCACTCATTGCAATACGGGCTCCC
TTGCAACATCAGGATACGGCACTGCGCTCGGGGTTATCCGCGCCCTTGCG
TCTGCAGACAATTTGAACCATGCTTACTGCACCGAGACACGACCCTACAA
TCAAGGATCTCGGTTGACTGCGTTCGAATTGGTCCACGACCGTCTCCCCG
CCACCCTCATAACAGACTCCATGGCCGCTGCTCTACTTGCGAAGTCTGGT
TCTAAGGTAGATGCCATCGTAGTGGGGGCGGATAGGGTGGCTGCTAACGG
AGATACGGCGAATAAAATTGGTACTTATGGCCTCGCTGTGCTTGCAAGGT
ATCACGGTGTAAAGTTCCTCGTCGCTGCACCGCTTACTACAATTGATCTG
GCCACCCCATCCGGGAATGAAATCATAATCGAGGAACGTGCGGCCTCCGA
GGTCACAAATGTCAGAGGGCCGCGTGCCAGCAATTCTACCAATGGGATTG
AACTAGAAACTGTGCGCATAGCCGCCGATGGCATCGATGTCTGGAACCCG
GCCTTTGATGTCACACCGTCCACACTTATTGACGGTATCATTACAGAGAG
GGGCGTGGTCGAGAAGGACGCCAGTGGACAATTTCACTTGGAGGACTTGT
TTCGCAACTCATCTTCAACATGAATGCGAGTAAGAGGGGCACCCGCTATT
GCCATTGTAGCGGCCCTCGCTCTTGCATCCGAGCTTCATAGGCTCATGGC
ATGCAATAACATACCTTCGGAAGCCCCAGAGGTTCAAGCCTTTATTGCGA
AAAAGCTCGATTATCTCGTGAGCAGCAGGCCCACAGCAGTGAATCTTGCC
GATGCTGCTCGGAAACTCAGGGCCGTGGCGAGTGATCATACACAAAGGCC
TGGATCGACCGGGCGCAGCGTCGCTACTGCTTTGATACAAGCAGCAGAGG
AAATGCTGAAGAAGGATATCGAGGACAATAAAAACATAGGAAAGCATGGT
GCCCAATGGATCATGGCCAATGCCGCGGGTAAGCCGAAGGCTACTGTTCT
CACTCATTGCAATACGGGCTCCCTTGCAACATCAGGATACGGCACTGCGC
TCGGGGTTATCCGCGCCCTTGCGTCTGCAGACAATTTGAACCATGCTTAC
TGCACCGAGACACGACCCTACAATCAAGGATCTCGGTTGACTGCGTTCGA
ATTGGTCCACGACCGTCTCCCCGCCACCCTCATAACAGACTCCATGGCCG
CTGCTCTACTTGCGAAGTCTGGTTCTAAGGTAGATGCCATCGTAGTGGGG
GCGGATAGGGTGGCTGCTAACGGAGATACGGCGAATAAAATTGGTACTTA
TGGCCTCGCTGTGCTTGCAAGGTATCACGGTGTAAAGTTCCTCGTCGCTG
CACCGCTTACTACAATTGATCTGGCCACCCCATCCGGGAATGAAATCATA
ATCGAGGAACGTGCGGCCTCCGAGGTCACAAATGTCAGAGGGCCGCGTGC
CAGCAATTCTACCAATGGGATTGAACTAGAAACTGTGCGCATAGCCGCCG
ATGGCATCGATGTCTGGAACCCGGCCTTTGATGTCACACCGTCCACACTT
ATTGACGGTATCATTACAGAGAGGGGCGTGGTCGAGAAGGACGCCAGTGG
ACAATTTCACTTGGAGGACTTGTTTCGCAACTCATCTTCAACATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0044249cellular biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MRI1CAN33_44845Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44845-T1.exon1CAN33_44845-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_44845-T1.exon2CAN33_44845-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44845-T1.cdsCAN33_44845-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44845-T1CAN33_44845-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-26)
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR042529
DBxrefInterPro:IPR000649
DBxrefInterPro:IPR005251
DBxrefInterPro:IPR011559
DBxrefPFAM:PF01008
ProductS-methyl-5-thioribose-1-phosphate isomerase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1602328..1603402 +
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