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CAN33_4490-T1, CAN33_4490-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_4490-T1
Unique NameCAN33_4490-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000019.1:470234..472039-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_4490-T1 ID=CAN33_4490-T1|Name=CAN33_4490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1806bp|location=Sequence derived from alignment at NKJJ01000019.1:470234..472039- (Aspergillus niger FDAARGOS_311)
ATGGGAAGTGGGAATTTGAGACGTCGCAATGTGGATATAGACTTCTACCT
CCGCCGAGTTTTCCGGAAGAAGTCCTTTCGGTATGTTCATGCTGTCACCC
AGTTCCTACTAGAGTAACTGGACTTAATACAGATCATTGTGTAGTCCTCT
TCAGCGTGAGGTAATCACGGCGGCCATCAACGGCCATGATGTGTTTCTGC
AGGCAAACACTTCATTCGGGAAAAGCCTGTGCTTCCAACTACCTGCAGTA
ATAAGCCATGGCGGTAGGTCCACCTGCGTCTACCTTTTGAACATCTTCGT
CTTTTGGAATGCATCTGATAATATTCTTAGTGACAGTAGTGATTAGTCCT
TTGCTTGCTTTGATGGTCAGCCTGAGAAACAATCACTCTCGAGCAGTACT
AATATCTCGTGCAGACCGACCAAGTAAAGGCACTTCAAGCTTTAGGGATT
GCGGTAGCAACAATCAATTCCACCACTCCGATTGCTGAGAGGCGTATAAT
CCTGGACGACCTCCTATCGGGTCATCCAAAGACCCGGCTTCTCTACGTGA
CACCAGAACTCTGTCAAACAGAAGGCTTTCGACGCAATCTACAGACTATT
CACCGTCAGGGTGAGCTAATTCGTGTTGCCATCGACGAAGCGCATTGCAT
CAGTGAATGGGGTCATGACTTTCGGCCGGCGTACAAAGAACTGGGCTGGT
TCAAGCAAGTTTTGACAAATCCGCCGGTTCCAATTAGTGCGCTTACGGCG
ACTGCAACGCCTCGTGTTCGGGAAGACATCATCAAACTTCTTGGATTAGA
TACTTCCAAGTTGAAGATCTTCAACACTCCTTCTGCGCGTCCGAACATAC
ATTACGAGATAAGGTACCTCGACGATTTTGCAAGCGACCCCACAGAGCCA
GAAAACTTTCAGATTCACAACCTCGTCTCATGGCTCCAGTCTGTCCAGGC
CCGCAGAGAGGCCGTCACTGGCACTGCACCCGCCACGCTTCCCCCGATAT
CCGGGATTATCTATGTGCCTCTCAGGACCGTATCTGACAAACTCGCCCCT
GCTCTCTCAGCAAGCTGGCCTGGCCGTATCCACGCTGTGGCTTACCACGC
TGGCCTATCCTCCGAAGACCGTACGCGCATTCAGTCCGAATGGACATCGT
CTAAGACATTCCCTCGGCATGCAAACAATAGAAACGAATCACCGGAACAC
CCGGCATTTTACATTATAGTCGCTACTACTGCATTCGGCATGGGCATCGA
TAGCCCACACGTCCGCTTCGTTGTTCATTGGAGTCCGCCACGGAGCTTCG
AAGGCTTCGTTCAAGAATCCGGTCGTGCAGGTCGCGACGGTCATGCTGCC
GCATCCATTGTCTACTACAACACACAAGAGCGAGACAGAATTCTTGACCG
TCTGCAACGAGACATTGAGAACGCTCGCAATCGCACTGGTGCGCATATGA
GCAACCAGAACAGCAAGGCACAAACCACCGTTCAAAATCAGCTTGCCCGA
TTAGCGAGCTTTCAGAAAGTGATCAGCTACTGTGAGAATACCACACGATG
CAGGCATGACCTGATCAAGGATTTCTTTGGCGATCTCGAACTTGAGAAGA
TGGGCTCCCAAGTCCCTACGTCTGGGATAAAAACTAATGGTTCGACTGCA
TCACCATGTGACTTTGCTTGTGACTTCTGCAAAGAAGGTTCGCACGCTCT
TGCCCAGCGAAAGGCGAAAATGGCTCCCGAAAGCCACTCGGACGACTTCG
TCGACATGGACGTCCCGTGGTATATGCAGAGGATGTTTCCAGGGGTGTTT
TCCTGA
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Coding sequence (CDS) from alignment at NKJJ01000019.1:470234..472039-

>CAN33_4490-T1 ID=CAN33_4490-T1|Name=CAN33_4490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6504bp|location=Sequence derived from alignment at NKJJ01000019.1:470234..472039- (Aspergillus niger FDAARGOS_311)
ACCGACCAAGTAAAGGCACTTCAAGCTTTAGGGATTGCGGTAGCAACAAT
CAATTCCACCACTCCGATTGCTGAGAGGCGTATAATCCTGGACGACCTCC
TATCGGGTCATCCAAAGACCCGGCTTCTCTACGTGACACCAGAACTCTGT
CAAACAGAAGGCTTTCGACGCAATCTACAGACTATTCACCGTCAGGGTGA
GCTAATTCGTGTTGCCATCGACGAAGCGCATTGCATCAGTGAATGGGGTC
ATGACTTTCGGCCGGCGTACAAAGAACTGGGCTGGTTCAAGCAAGTTTTG
ACAAATCCGCCGGTTCCAATTAGTGCGCTTACGGCGACTGCAACGCCTCG
TGTTCGGGAAGACATCATCAAACTTCTTGGATTAGATACTTCCAAGTTGA
AGATCTTCAACACTCCTTCTGCGCGTCCGAACATACATTACGAGATAAGG
TACCTCGACGATTTTGCAAGCGACCCCACAGAGCCAGAAAACTTTCAGAT
TCACAACCTCGTCTCATGGCTCCAGTCTGTCCAGGCCCGCAGAGAGGCCG
TCACTGGCACTGCACCCGCCACGCTTCCCCCGATATCCGGGATTATCTAT
GTGCCTCTCAGGACCGTATCTGACAAACTCGCCCCTGCTCTCTCAGCAAG
CTGGCCTGGCCGTATCCACGCTGTGGCTTACCACGCTGGCCTATCCTCCG
AAGACCGTACGCGCATTCAGTCCGAATGGACATCGTCTAAGACATTCCCT
CGGCATGCAAACAATAGAAACGAATCACCGGAACACCCGGCATTTTACAT
TATAGTCGCTACTACTGCATTCGGCATGGGCATCGATAGCCCACACGTCC
GCTTCGTTGTTCATTGGAGTCCGCCACGGAGCTTCGAAGGCTTCGTTCAA
GAATCCGGTCGTGCAGGTCGCGACGGTCATGCTGCCGCATCCATTGTCTA
CTACAACACACAAGAGCGAGACAGAATTCTTGACCGTCTGCAACGAGACA
TTGAGAACGCTCGCAATCGCACTGGTGCGCATATGAGCAACCAGAACAGC
AAGGCACAAACCACCGTTCAAAATCAGCTTGCCCGATTAGCGAGCTTTCA
GAAAGTGATCAGCTACTGTGAGAATACCACACGATGCAGGCATGACCTGA
TCAAGGATTTCTTTGGCGATCTCGAACTTGAGAAGATGGGCTCCCAAGTC
CCTACGTCTGGGATAAAAACTAATGGTTCGACTGCATCACCATGTGACTT
TGCTTGTGACTTCTGCAAAGAAGGTTCGCACGCTCTTGCCCAGCGAAAGG
CGAAAATGGCTCCCGAAAGCCACTCGGACGACTTCGTCGACATGGACGTC
CCGTGGTATATGCAGAGGATGTTTCCAGGGGTGTTTTCCTGATGACAGTA
GTGATTAGTCCTTTGCTTGCTTTGATGTCCTCTTCAGCGTGAGGTAATCA
CGGCGGCCATCAACGGCCATGATGTGTTTCTGCAGGCAAACACTTCATTC
GGGAAAAGCCTGTGCTTCCAACTACCTGCAGTAATAAGCCATGGCGATGG
GAAGTGGGAATTTGAGACGTCGCAATGTGGATATAGACTTCTACCTCCGC
CGAGTTTTCCGGAAGAAGTCCTTTCGACCGACCAAGTAAAGGCACTTCAA
GCTTTAGGGATTGCGGTAGCAACAATCAATTCCACCACTCCGATTGCTGA
GAGGCGTATAATCCTGGACGACCTCCTATCGGGTCATCCAAAGACCCGGC
TTCTCTACGTGACACCAGAACTCTGTCAAACAGAAGGCTTTCGACGCAAT
CTACAGACTATTCACCGTCAGGGTGAGCTAATTCGTGTTGCCATCGACGA
AGCGCATTGCATCAGTGAATGGGGTCATGACTTTCGGCCGGCGTACAAAG
AACTGGGCTGGTTCAAGCAAGTTTTGACAAATCCGCCGGTTCCAATTAGT
GCGCTTACGGCGACTGCAACGCCTCGTGTTCGGGAAGACATCATCAAACT
TCTTGGATTAGATACTTCCAAGTTGAAGATCTTCAACACTCCTTCTGCGC
GTCCGAACATACATTACGAGATAAGGTACCTCGACGATTTTGCAAGCGAC
CCCACAGAGCCAGAAAACTTTCAGATTCACAACCTCGTCTCATGGCTCCA
GTCTGTCCAGGCCCGCAGAGAGGCCGTCACTGGCACTGCACCCGCCACGC
TTCCCCCGATATCCGGGATTATCTATGTGCCTCTCAGGACCGTATCTGAC
AAACTCGCCCCTGCTCTCTCAGCAAGCTGGCCTGGCCGTATCCACGCTGT
GGCTTACCACGCTGGCCTATCCTCCGAAGACCGTACGCGCATTCAGTCCG
AATGGACATCGTCTAAGACATTCCCTCGGCATGCAAACAATAGAAACGAA
TCACCGGAACACCCGGCATTTTACATTATAGTCGCTACTACTGCATTCGG
CATGGGCATCGATAGCCCACACGTCCGCTTCGTTGTTCATTGGAGTCCGC
CACGGAGCTTCGAAGGCTTCGTTCAAGAATCCGGTCGTGCAGGTCGCGAC
GGTCATGCTGCCGCATCCATTGTCTACTACAACACACAAGAGCGAGACAG
AATTCTTGACCGTCTGCAACGAGACATTGAGAACGCTCGCAATCGCACTG
GTGCGCATATGAGCAACCAGAACAGCAAGGCACAAACCACCGTTCAAAAT
CAGCTTGCCCGATTAGCGAGCTTTCAGAAAGTGATCAGCTACTGTGAGAA
TACCACACGATGCAGGCATGACCTGATCAAGGATTTCTTTGGCGATCTCG
AACTTGAGAAGATGGGCTCCCAAGTCCCTACGTCTGGGATAAAAACTAAT
GGTTCGACTGCATCACCATGTGACTTTGCTTGTGACTTCTGCAAAGAAGG
TTCGCACGCTCTTGCCCAGCGAAAGGCGAAAATGGCTCCCGAAAGCCACT
CGGACGACTTCGTCGACATGGACGTCCCGTGGTATATGCAGAGGATGTTT
CCAGGGGTGTTTTCCTGATGACAGTAGTGATTAGTCCTTTGCTTGCTTTG
ATGTCCTCTTCAGCGTGAGGTAATCACGGCGGCCATCAACGGCCATGATG
TGTTTCTGCAGGCAAACACTTCATTCGGGAAAAGCCTGTGCTTCCAACTA
CCTGCAGTAATAAGCCATGGCGATGGGAAGTGGGAATTTGAGACGTCGCA
ATGTGGATATAGACTTCTACCTCCGCCGAGTTTTCCGGAAGAAGTCCTTT
CGACCGACCAAGTAAAGGCACTTCAAGCTTTAGGGATTGCGGTAGCAACA
ATCAATTCCACCACTCCGATTGCTGAGAGGCGTATAATCCTGGACGACCT
CCTATCGGGTCATCCAAAGACCCGGCTTCTCTACGTGACACCAGAACTCT
GTCAAACAGAAGGCTTTCGACGCAATCTACAGACTATTCACCGTCAGGGT
GAGCTAATTCGTGTTGCCATCGACGAAGCGCATTGCATCAGTGAATGGGG
TCATGACTTTCGGCCGGCGTACAAAGAACTGGGCTGGTTCAAGCAAGTTT
TGACAAATCCGCCGGTTCCAATTAGTGCGCTTACGGCGACTGCAACGCCT
CGTGTTCGGGAAGACATCATCAAACTTCTTGGATTAGATACTTCCAAGTT
GAAGATCTTCAACACTCCTTCTGCGCGTCCGAACATACATTACGAGATAA
GGTACCTCGACGATTTTGCAAGCGACCCCACAGAGCCAGAAAACTTTCAG
ATTCACAACCTCGTCTCATGGCTCCAGTCTGTCCAGGCCCGCAGAGAGGC
CGTCACTGGCACTGCACCCGCCACGCTTCCCCCGATATCCGGGATTATCT
ATGTGCCTCTCAGGACCGTATCTGACAAACTCGCCCCTGCTCTCTCAGCA
AGCTGGCCTGGCCGTATCCACGCTGTGGCTTACCACGCTGGCCTATCCTC
CGAAGACCGTACGCGCATTCAGTCCGAATGGACATCGTCTAAGACATTCC
CTCGGCATGCAAACAATAGAAACGAATCACCGGAACACCCGGCATTTTAC
ATTATAGTCGCTACTACTGCATTCGGCATGGGCATCGATAGCCCACACGT
CCGCTTCGTTGTTCATTGGAGTCCGCCACGGAGCTTCGAAGGCTTCGTTC
AAGAATCCGGTCGTGCAGGTCGCGACGGTCATGCTGCCGCATCCATTGTC
TACTACAACACACAAGAGCGAGACAGAATTCTTGACCGTCTGCAACGAGA
CATTGAGAACGCTCGCAATCGCACTGGTGCGCATATGAGCAACCAGAACA
GCAAGGCACAAACCACCGTTCAAAATCAGCTTGCCCGATTAGCGAGCTTT
CAGAAAGTGATCAGCTACTGTGAGAATACCACACGATGCAGGCATGACCT
GATCAAGGATTTCTTTGGCGATCTCGAACTTGAGAAGATGGGCTCCCAAG
TCCCTACGTCTGGGATAAAAACTAATGGTTCGACTGCATCACCATGTGAC
TTTGCTTGTGACTTCTGCAAAGAAGGTTCGCACGCTCTTGCCCAGCGAAA
GGCGAAAATGGCTCCCGAAAGCCACTCGGACGACTTCGTCGACATGGACG
TCCCGTGGTATATGCAGAGGATGTTTCCAGGGGTGTTTTCCTGATGACAG
TAGTGATTAGTCCTTTGCTTGCTTTGATGTCCTCTTCAGCGTGAGGTAAT
CACGGCGGCCATCAACGGCCATGATGTGTTTCTGCAGGCAAACACTTCAT
TCGGGAAAAGCCTGTGCTTCCAACTACCTGCAGTAATAAGCCATGGCGAT
GGGAAGTGGGAATTTGAGACGTCGCAATGTGGATATAGACTTCTACCTCC
GCCGAGTTTTCCGGAAGAAGTCCTTTCGACCGACCAAGTAAAGGCACTTC
AAGCTTTAGGGATTGCGGTAGCAACAATCAATTCCACCACTCCGATTGCT
GAGAGGCGTATAATCCTGGACGACCTCCTATCGGGTCATCCAAAGACCCG
GCTTCTCTACGTGACACCAGAACTCTGTCAAACAGAAGGCTTTCGACGCA
ATCTACAGACTATTCACCGTCAGGGTGAGCTAATTCGTGTTGCCATCGAC
GAAGCGCATTGCATCAGTGAATGGGGTCATGACTTTCGGCCGGCGTACAA
AGAACTGGGCTGGTTCAAGCAAGTTTTGACAAATCCGCCGGTTCCAATTA
GTGCGCTTACGGCGACTGCAACGCCTCGTGTTCGGGAAGACATCATCAAA
CTTCTTGGATTAGATACTTCCAAGTTGAAGATCTTCAACACTCCTTCTGC
GCGTCCGAACATACATTACGAGATAAGGTACCTCGACGATTTTGCAAGCG
ACCCCACAGAGCCAGAAAACTTTCAGATTCACAACCTCGTCTCATGGCTC
CAGTCTGTCCAGGCCCGCAGAGAGGCCGTCACTGGCACTGCACCCGCCAC
GCTTCCCCCGATATCCGGGATTATCTATGTGCCTCTCAGGACCGTATCTG
ACAAACTCGCCCCTGCTCTCTCAGCAAGCTGGCCTGGCCGTATCCACGCT
GTGGCTTACCACGCTGGCCTATCCTCCGAAGACCGTACGCGCATTCAGTC
CGAATGGACATCGTCTAAGACATTCCCTCGGCATGCAAACAATAGAAACG
AATCACCGGAACACCCGGCATTTTACATTATAGTCGCTACTACTGCATTC
GGCATGGGCATCGATAGCCCACACGTCCGCTTCGTTGTTCATTGGAGTCC
GCCACGGAGCTTCGAAGGCTTCGTTCAAGAATCCGGTCGTGCAGGTCGCG
ACGGTCATGCTGCCGCATCCATTGTCTACTACAACACACAAGAGCGAGAC
AGAATTCTTGACCGTCTGCAACGAGACATTGAGAACGCTCGCAATCGCAC
TGGTGCGCATATGAGCAACCAGAACAGCAAGGCACAAACCACCGTTCAAA
ATCAGCTTGCCCGATTAGCGAGCTTTCAGAAAGTGATCAGCTACTGTGAG
AATACCACACGATGCAGGCATGACCTGATCAAGGATTTCTTTGGCGATCT
CGAACTTGAGAAGATGGGCTCCCAAGTCCCTACGTCTGGGATAAAAACTA
ATGGTTCGACTGCATCACCATGTGACTTTGCTTGTGACTTCTGCAAAGAA
GGTTCGCACGCTCTTGCCCAGCGAAAGGCGAAAATGGCTCCCGAAAGCCA
CTCGGACGACTTCGTCGACATGGACGTCCCGTGGTATATGCAGAGGATGT
TTCCAGGGGTGTTTTCCTGATGACAGTAGTGATTAGTCCTTTGCTTGCTT
TGATGTCCTCTTCAGCGTGAGGTAATCACGGCGGCCATCAACGGCCATGA
TGTGTTTCTGCAGGCAAACACTTCATTCGGGAAAAGCCTGTGCTTCCAAC
TACCTGCAGTAATAAGCCATGGCGATGGGAAGTGGGAATTTGAGACGTCG
CAATGTGGATATAGACTTCTACCTCCGCCGAGTTTTCCGGAAGAAGTCCT
TTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_4490CAN33_4490Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4490-T1CAN33_4490-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4490-T1.cdsCAN33_4490-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_4490-T1.exon4CAN33_4490-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_4490-T1.exon3CAN33_4490-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_4490-T1.exon2CAN33_4490-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_4490-T1.exon1CAN33_4490-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR004589
DBxrefInterPro:IPR032284
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefPFAM:PF16124
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductATP-dependent DNA helicase RecQ family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000019.1supercontigNKJJ01000019.1:470234..472039 -
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