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CAN33_44995-T1, CAN33_44995-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_44995-T1
Unique NameCAN33_44995-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000022.1:1780775..1781892-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_44995-T1 ID=CAN33_44995-T1|Name=CAN33_44995-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1118bp|location=Sequence derived from alignment at NKJJ01000022.1:1780775..1781892- (Aspergillus niger FDAARGOS_311)
ATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGAC
CAACACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCG
AGGACAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCT
GTAGCCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGG
CCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCT
GTTGCTGGTCGCCGGTGAGCTCGCCCTCATTTCCTTGTCGCAGTATCTAC
AGTTAACTGATATGGACTCTGCTGCTACCTAGGATGGTACGAAAGTGGTC
GGAGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCTTGCAACCAATGC
GACCACTCAAGTCGCCGCTCACGATGCGCCCATCAAATGCTGCCACATGA
TCCCAAACCCGGCTGGAGGGAGCCCGCTACTCGTAACCGGTTCTTGGGAC
AAGACCATCAAGTACTGGGACTTGCGACAGTCAAACCCCATCGCCTCGGT
GGAGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGGACAAACTCCTCG
TGGTCGGCACCGCAGACCGCTATATCAACGTCATCAACCTCGACCAACCC
ACCAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTGGCAGACGCGGGT
AGTCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCGGCAGTGTCGAGG
GCCGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCCTCCAACAACTTC
AGTTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGTCAACAACATCTA
CTCCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCACCTTCAGCACCG
CCGGCAGTGACGGCACCTTCCACTTCTGGGACAAGGACGCCAAGCATCGT
CTAAAGGGATATCCCTCCGTGGGCGGTACCATCTCCAGCACTGCCTTCAA
CCGCAACGGCAACATCTTCGCCTACGCTGTCAGTTACGACTGGAGCAAGG
GTACTCCGCCAACACCCAGCAACTGCCCAACAAGGTTATGCTGCACCCTG
TCAGCCAAGAGGAAGTGA
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Coding sequence (CDS) from alignment at NKJJ01000022.1:1780775..1781892-

>CAN33_44995-T1 ID=CAN33_44995-T1|Name=CAN33_44995-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2100bp|location=Sequence derived from alignment at NKJJ01000022.1:1780775..1781892- (Aspergillus niger FDAARGOS_311)
GATGGTACGAAAGTGGTCGGAGCTGGCGCCGACAAAGCCGCTCGGATGCT
CGACCTTGCAACCAATGCGACCACTCAAGTCGCCGCTCACGATGCGCCCA
TCAAATGCTGCCACATGATCCCAAACCCGGCTGGAGGGAGCCCGCTACTC
GTAACCGGTTCTTGGGACAAGACCATCAAGTACTGGGACTTGCGACAGTC
AAACCCCATCGCCTCGGTGGAGTGCCAGGAGCGTGTTTACACCATGGATG
TCAAGGACAAACTCCTCGTGGTCGGCACCGCAGACCGCTATATCAACGTC
ATCAACCTCGACCAACCCACCAAATTCTACAAAACCATGCAGTCCCCTCT
CAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCGACTGCCACCGGGTTCG
CCGTCGGCAGTGTCGAGGGCCGCTGTGCGATCCAGTATGTCGAGGACAAG
GACTCCTCCAACAACTTCAGTTTCAAGTGCCACCGTGAGACTCCTCAGCG
CGATGTCAACAACATCTACTCCGTCAACGCCATCTCCTTCCACCCTGTCC
ACGGCACCTTCAGCACCGCCGGCAGTGACGGCACCTTCCACTTCTGGGAC
AAGGACGCCAAGCATCGTCTAAAGGGATATCCCTCCGTGGGCGGTACCAT
CTCCAGCACTGCCTTCAACCGCAACGGCAACATCTTCGCCTACGCTGTCA
GTTACGACTGGAGCAAGGGTACTCCGCCAACACCCAGCAACTGCCCAACA
AGGTTATGCTGCACCCTGTCAGCCAAGAGGAAGTGAATGTCGCTTTTCGG
TTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGACCAACACCACAGGTG
ATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCGAGGACAGTATTTCG
GACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCTGTAGCCTCATGGGA
CAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGGCCAGAGCGAAGGTA
AAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCTGTTGCTGGTCGCCG
GATGGTACGAAAGTGGTCGGAGCTGGCGCCGACAAAGCCGCTCGGATGCT
CGACCTTGCAACCAATGCGACCACTCAAGTCGCCGCTCACGATGCGCCCA
TCAAATGCTGCCACATGATCCCAAACCCGGCTGGAGGGAGCCCGCTACTC
GTAACCGGTTCTTGGGACAAGACCATCAAGTACTGGGACTTGCGACAGTC
AAACCCCATCGCCTCGGTGGAGTGCCAGGAGCGTGTTTACACCATGGATG
TCAAGGACAAACTCCTCGTGGTCGGCACCGCAGACCGCTATATCAACGTC
ATCAACCTCGACCAACCCACCAAATTCTACAAAACCATGCAGTCCCCTCT
CAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCGACTGCCACCGGGTTCG
CCGTCGGCAGTGTCGAGGGCCGCTGTGCGATCCAGTATGTCGAGGACAAG
GACTCCTCCAACAACTTCAGTTTCAAGTGCCACCGTGAGACTCCTCAGCG
CGATGTCAACAACATCTACTCCGTCAACGCCATCTCCTTCCACCCTGTCC
ACGGCACCTTCAGCACCGCCGGCAGTGACGGCACCTTCCACTTCTGGGAC
AAGGACGCCAAGCATCGTCTAAAGGGATATCCCTCCGTGGGCGGTACCAT
CTCCAGCACTGCCTTCAACCGCAACGGCAACATCTTCGCCTACGCTGTCA
GTTACGACTGGAGCAAGGGTACTCCGCCAACACCCAGCAACTGCCCAACA
AGGTTATGCTGCACCCTGTCAGCCAAGAGGAAGTGAATGTCGCTTTTCGG
TTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGACCAACACCACAGGTG
ATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCGAGGACAGTATTTCG
GACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCTGTAGCCTCATGGGA
CAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGGCCAGAGCGAAGGTA
AAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCTGTTGCTGGTCGCCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GLE2CAN33_44995Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44995-T1CAN33_44995-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44995-T1.cdsCAN33_44995-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_44995-T1.exon2CAN33_44995-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_44995-T1.exon1CAN33_44995-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
ProductRNA export factor gle2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000022.1supercontigNKJJ01000022.1:1780775..1781892 -
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